Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159044662

GI number:

Start: 2249037

End: 2250611

Strand: Reverse

Name: Not Available

Synonym: Dshi_2119

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044663

Following gene: 159044660

Centisome position: NA

GC content: NA

Gene sequence:

>1575_bases
ATGTTGATCCGATCAGGACCGTTCAGGGGGGTGAATCCACACACATCCCTGATATCGGCAGGGATAATCCTGCTTTTCGT
GTTGCTTGTGCTGGCGTTTCCAAGCCGTTCGGCCGACTGGATCGACGCCGCCAGAACCCTTATCACGTTCTATTTCGGCT
GGTGGTACGTGCTGCTTTCGGGCGTGTTTCTCGTATTCCTGATCGCAATCGCGTTCAGCAAATACGGCGCGATCCGGCTC
GGAGACGCGGACGAGCGCCCGAAATACAGCTACTTTACCTGGTTCGCGATGCTCTATGCCGCGGGGCAGGGGATCGGGAT
CATCTTCTGGTCCATCGCCGAGCCGATGTTCCACTACTCGGGCGGCACGCCCTTCGCCGATGGCAGCGGCACCGCGGCTG
CGGCGGACATGGCGATGCAGGTGACCTTCTTTCACTGGGGCCTGAACGCCTGGGCGATCTACTGCATCGTGGCCCTGGCC
TTGTGTCTGGTCAGCTACCGGCTGAAGAAGCCGCTCGGCATCCGCTATACCCTCTATCCGTTGTTCGGCGACCGTGTCGA
AGGCCCGCTGGGCGTGGTGATCGACGTGGTGGCGGTGTTCGCAACCATCTTCGGCATCGCGACCTCCCTTGGCCTGGGGG
TCACGCAGATCAACGCCGGCCTCAACCACCTGTGGGGCGTTCCGATCTCCGAGACGGTCCAGCTTGTGCTGATTGCCGCG
ATCACGGCTGTGGCGCTGTGCTCGGTCCTGTCGGGCCTTGACCGGGGCATTAAGTGGCTGTCGCAGGTCAACATGTGGCT
GACGATCGCCCTGCTGGTCTTCTTCTTCACCTGGGGGCCGACCCAATACCTGCTGGTGAGCCTGGGCGAGGTGACGCTGG
CTTACTTTGTCAGCCTCTTCTCCTTCAACGTCTACATCGAAAGCGTGCCCGCCGAGGCAACCCGTTGGAGCGACATGTGG
CAGGGCTGGTGGACGACCTTCTACTGGGGTTGGTGGATTTCCTGGGCGCCCTTCGTGGGGGTGTTCGTGGCGCGCGTGTC
GCGGGGCCGGACGGTGCGGGAATTCATCCTTGGCGTCGTGGGCGTGTCCTCGATCCTGTCCTTCGTCTGGATCGTGGCCT
ATGGCGGCACCGCGCTCTGGGCCGAGGTTCTGGGGCCGGGGGGCGTGTCCGATGCGGTGAGCGCGAATGTCTCCATGGCG
CTCTTTGCCACCTTCGATGCGATGGATGTGGGGGCCATCGGCTTGGTCGCCGGCGTGTTCGGCACGATCCTCGTGACGAC
CTATTTCGTGACCTCCTCGGATTCCGGCACGCTCGTTGTCGCCACGATCCTCAGCGAGGGCAACGAGCATCCGATGTATC
GCCACCGCATGATCTGGGGCACGTTCGAAGGTGTCGTCGCCGCCGTCCTGCTGGTCGTTGGCGGGAGTGCCGCGCTCAGC
ACGCTGCAGACCGCGGCGATCATCGCCGCACTGCCGTTCTCGGTGATCATGGTGCTTATGTGTTTCGCGATCATCCGCTG
CCTTGCGCTCGAACATGGCAAAGAGGCGATCAGATCCGCCGACAAGACCGCCTGA

Upstream 100 bases:

>100_bases
TCCTACGGAATGACGGACCAGCAAGACGGGCACCGGCATCGGAAAAAGGCACGCGGGCAAGGAGGTCCGCGCGCGAGACT
AGACCCATGGGAGGACTTTC

Downstream 100 bases:

>100_bases
TCCGGCGGTATCGGGTGGGCGCGGGAGCGCCCGCCCGTTCAGGCGTCGGCGTCCTCCGGGACCGCCTGGCGCCGCCAGGT
TTCGGGGGGCACACCCTCGC

Product: betaine/carnitine/choline transporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>524_residues
MLIRSGPFRGVNPHTSLISAGIILLFVLLVLAFPSRSADWIDAARTLITFYFGWWYVLLSGVFLVFLIAIAFSKYGAIRL
GDADERPKYSYFTWFAMLYAAGQGIGIIFWSIAEPMFHYSGGTPFADGSGTAAAADMAMQVTFFHWGLNAWAIYCIVALA
LCLVSYRLKKPLGIRYTLYPLFGDRVEGPLGVVIDVVAVFATIFGIATSLGLGVTQINAGLNHLWGVPISETVQLVLIAA
ITAVALCSVLSGLDRGIKWLSQVNMWLTIALLVFFFTWGPTQYLLVSLGEVTLAYFVSLFSFNVYIESVPAEATRWSDMW
QGWWTTFYWGWWISWAPFVGVFVARVSRGRTVREFILGVVGVSSILSFVWIVAYGGTALWAEVLGPGGVSDAVSANVSMA
LFATFDAMDVGAIGLVAGVFGTILVTTYFVTSSDSGTLVVATILSEGNEHPMYRHRMIWGTFEGVVAAVLLVVGGSAALS
TLQTAAIIAALPFSVIMVLMCFAIIRCLALEHGKEAIRSADKTA

Sequences:
NA

Specific function: NA

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA