Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159044353

GI number:

Start: 1875927

End: 1878011

Strand: Reverse

Name: Not Available

Synonym: Dshi_1804

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044358

Following gene: 159044346

Centisome position: NA

GC content: NA

Gene sequence:

>2085_bases
GTGACCCAATACGCAGAGGTACGGCAGGTGCTGTTCCCCTGGGCCCCCGTGGTGCTGGGCTGCGGGATGCTGGCCTATTT
TCTGCCCGCGGGCGAGCCGTCCCTGGCGGTGCTGCGGCTGGTGTGGTCCTGTGCTGCCTTCGGCCTGCTCTGGGGGCTCT
TTGCGCCCTGGTCCCTGCGGCCCCTGGGCTGGGCGCTGGCGCTGGCGGCGGGGGGCTACGGGCTCGCGGCCTGGCGCACG
GCGGATGTGGCCGCCTCGGTGCTGCCCTTTCGCTATTACGGGCCGATCGAGGGGCGCATCGTCGAGATCGACAGCTCCTA
TGCCGGGGCGATGCGCCTGACCCTCGCGGATGTGCGGCTGGAGGATGTCGCGCCCGACCGCCGCCCGGCGCAGGTGCGGG
TGTCGCTCCACGGGCCGTTGCCCGAGGTGCCGCTACGCCCGGGCCAGGTCGTGATGACCACCGGGCATCTGTCGCCGCCC
AACGCGCCGGTGGAGCCGGGCGGCTTCGACTTTCGCCGCCATGCCTGGTTCGAGGGGCTGGGGGCCGTGGGCTACACCCG
CGTGCCCGTGGTCCTCTGGGCGGAGCCTGCGCAGCTGAGCTTCGCCGAGCGTGTCTACGAGACCCGGCTGAAGCTGTCCA
AGGCGATCCGCGACCGGATCGCGGGCCAGCCCGGGGCCTTCGCCTCGGCGATCATCACCGGCGACCGGGCGGCCATCGAC
CGCGCCCATGTCGAAGACCTGCGCGGCTCGAACCTTGCCCATCTGCTGGCGATCTCCGGCCTGCATATGGGGTTGCTCAC
GGGTACGGTGTTTCTGGGCCTGCGCAGTCTAATGGCGCTGTGGCCCTGGCTGGCGCTGCGCGTGCCGGTCAAGAAGGTGG
CGGCGGTCTGCGCCCTGGGCGCGGCGGTCGTCTACCTGTTCATCTCGGGCATGAGCGTGGCGACGGAGCGGGCCTTCATC
ATGGTGGCGATGATCCTGGTGGGCGTGTGTTTCGACCGCCGGGCGCTGTCCCTGCGTTCGGTCGCCTGGGCGGCGCTGCT
GGTGCTGGCGCTCAGGCCCGAGGCGGTGCTGGGCCCGGGGTTCCAGATGTCGTTTGCCGCGACCACGGCGCTGGTCATCA
CCTATGCCCATCTGCGCGATGTGCGCTGGTGGCGGGGCATTCCGAAATGGGCCAAGGGGACGGCCTCGCTCTTGCTGTCC
TCGGCGGTGGCGGGGGCGGCCACGGCCCCCATTGCGGCGGCGCATTTCAACATCGTCGGCCATTACGGGCTGATCGCGAA
CCTGGCCTCGGTGCCGGTCATGGGCACGCTGGTGATGCCCGGCGCGCTGGTGGCGCTGGCGGGCGTGCCCCTGGGGCTGG
AGGGGGTCGGTCTCTTCGCGATGGAGGTCGGGATCCGCTGGATCCTCTGGGTGGCCGGCACGGTCGCGGGGCTGGAGGGG
GCGGTGGGCCATGTGGTCCGCCCGATGCCCGTGGTGCTGCCGTTGATCGTGCTGGGAGCGCTGGTGGTGGGGCTTTTGCC
CTGGCGGGCGCGATGGGCGGGGCTGGCGCCGGTGGTGCTGGCCCTGGGGCTCTGGACCCAGTCCGACCGGCCAGAGCTGC
TGATCTCCGACACGGGCGGGCTGCTGGGCGTGATGACCGAGCAGGGACGCGCGCTCAGCAAGGGCCGCGGTGACGGGTTC
GCGGCGCGCAACTGGCTGGAGAATGACGGCGACGGGGTGACGCAGGACGTGGCGGCGGCGCGCGCGGGGATCGAGGCGGG
CAAGGGGACGGTCAGCGTGGCCCTCGGGCCCTACCGGGTGATCCAGCTGCGCGGCAAGACCGGTGCGGCGCAGTTTCCGG
AGGCCTGTGCCACGGCGGACCTGGTGGTGGCCAACACGCGGCTGCCGCGCAGCACCGGGGCCTGCGAGAGCATCGACGCC
TGGGATCTGCGCCGGACAGGTGCGCTGGCGGTGTCGGTGACCGAGGACGGGTTGCAGGTGGTCCGCGCGAAGTCCGCAGA
AGAGCAGCGGATGTGGACCGGGGCCGCACGTGCGACCACGCCGGGCCGCCTGGCCCGCGCGCCGGGCGCGGAGCCGACCC
GCTGA

Upstream 100 bases:

>100_bases
CCTGCGCGTTGGGGGGCGCGCGGCGGGCGCGTTAACCAATTGGCAACCAAGGTTTCGATAAGGTTGCGCAGGACTTACCC
AACCCGGCGGGACAGGACAA

Downstream 100 bases:

>100_bases
GCCGCCGCGGGCCAAGAGTTTTCGAAAACTCTTGGAGGCGCGCAGCCCTGCTGCCGCGCAAAACGTTTGGATGATTTCCC
GCAAGACCGCGGGCTGGACC

Product: putative competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>694_residues
MTQYAEVRQVLFPWAPVVLGCGMLAYFLPAGEPSLAVLRLVWSCAAFGLLWGLFAPWSLRPLGWALALAAGGYGLAAWRT
ADVAASVLPFRYYGPIEGRIVEIDSSYAGAMRLTLADVRLEDVAPDRRPAQVRVSLHGPLPEVPLRPGQVVMTTGHLSPP
NAPVEPGGFDFRRHAWFEGLGAVGYTRVPVVLWAEPAQLSFAERVYETRLKLSKAIRDRIAGQPGAFASAIITGDRAAID
RAHVEDLRGSNLAHLLAISGLHMGLLTGTVFLGLRSLMALWPWLALRVPVKKVAAVCALGAAVVYLFISGMSVATERAFI
MVAMILVGVCFDRRALSLRSVAWAALLVLALRPEAVLGPGFQMSFAATTALVITYAHLRDVRWWRGIPKWAKGTASLLLS
SAVAGAATAPIAAAHFNIVGHYGLIANLASVPVMGTLVMPGALVALAGVPLGLEGVGLFAMEVGIRWILWVAGTVAGLEG
AVGHVVRPMPVVLPLIVLGALVVGLLPWRARWAGLAPVVLALGLWTQSDRPELLISDTGGLLGVMTEQGRALSKGRGDGF
AARNWLENDGDGVTQDVAAARAGIEAGKGTVSVALGPYRVIQLRGKTGAAQFPEACATADLVVANTRLPRSTGACESIDA
WDLRRTGALAVSVTEDGLQVVRAKSAEEQRMWTGAARATTPGRLARAPGAEPTR

Sequences:
NA

Specific function: NA

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA