Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159044071

GI number:

Start: 1582914

End: 1584101

Strand: Reverse

Name: Not Available

Synonym: Dshi_1522

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044073

Following gene: 159044070

Centisome position: NA

GC content: NA

Gene sequence:

>1188_bases
ATGAAATCGCTGCTTCTCGCCTCCGTGGCGACCGTGGCCATGGCGACCTTCGCCGCCGCGCAATCGAACGACATCAAGAT
CGGTATCTCGGTGGGCTTCACCGGGCCGCTGGAATCGCTGGCGCCGCCCATGGCGATGGGGGCCGAGATGGCGATGAAGG
AAGTCTCCGACAGCGGATTGCTGCTTGGTGGATCCACGGTCACGCCGGTCCGGGCCGACAGCACCTGCATCGATGCCGGT
GCGGCGACCTCTGCCGCCGAGCGGCTGATCACCTCCGACGGGGTGAAGGGCATAATGGGGGCGATGTGCTCCGGGGCGAC
GGGCGCGATCCTGTCCAACGTGGCGATGCCGAACGGAGTTGTGATGATCTCGCCCTCGGCCACCTCGCCGGCCCTGTCGA
CGGTCGAAGACAACGGCCTGTTCTTCCGCACGGCACCCTCGGATGCGCGTCAGGGTGTGGTGATGACCGAGATCATCATG
GATCGCGGCTTCAAGGAAGTGGCGGTTACCTACACCAACAACGACTACGGCAAGGGGCTCGCGGACAGCTTCGCCGCGGC
CTTCGAGGAGGCGGGCGGCACCGTGACTCTCGTGGCGGCCCATGAGGACGGCAAGGCGGATTATTCCGCCGAGGTCGGCG
CGCTGGCCTCTGCGGGCGGCGAGGTGCTGGTCGTGGCGGGCTACGTGGACCAGGGCGGGTCGGGCATCATCCAGGCCGCG
CTCGACACCGGTGCGTTCGACACCTTCGTGCTGCCGGATGGCATGGTCTCCGTCGCGCTGGAGGAAAACTTCGGGTCCGA
CATCGACGGATCCTTCGGGCAGAACCCGGGCACCGACAGCGACGGCAAGCGGATCTATGCGGAGATGGTGGGCGATGCAT
ACGATTCGACCTCGCCCTTCTCGGCCGAAAGCTACGATGCCGCGGCTCTGATCATGCTGGCGATGCAAGCGGCAGGCTCC
GCCGAGCCGGGCGACTACAAGGATCACGTGATGGACGTGGCCAACGCGCCGGGCGAAGAGATTTTGCCGGGTGAGCTGGC
AAAAGGCCTCAAGATCCTCGCCGAAGGGGGCGAGATCGACTATGTCGGCGCCTCGGCGGTGGAGCTGATCGGGGGCGGCG
AATCCGCGGGCAATTACCGCGAGATGGAAATGAAGGACGGCAAGGTCACGACTGTCCGGTTCCGCTGA

Upstream 100 bases:

>100_bases
CGGTTTCCGCAAGGGAATGTCGACCTTGTCCCCCTTTTCTTTCCCCGATTGGCGCTCTAGCCTGCGATCTGGGCAACAAG
ATCCAACTTGGGAGTTACAC

Downstream 100 bases:

>100_bases
GCGGTTGACATTACCAGAGCAGCCCGGGCATCCCCGGGCTGTTTTCCATGAGGGCGCCCATGATAAAGGTCGAAAACCTG
CACAAGCATTTCGGCGGCTT

Product: putative periplasmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>395_residues
MKSLLLASVATVAMATFAAAQSNDIKIGISVGFTGPLESLAPPMAMGAEMAMKEVSDSGLLLGGSTVTPVRADSTCIDAG
AATSAAERLITSDGVKGIMGAMCSGATGAILSNVAMPNGVVMISPSATSPALSTVEDNGLFFRTAPSDARQGVVMTEIIM
DRGFKEVAVTYTNNDYGKGLADSFAAAFEEAGGTVTLVAAHEDGKADYSAEVGALASAGGEVLVVAGYVDQGGSGIIQAA
LDTGAFDTFVLPDGMVSVALEENFGSDIDGSFGQNPGTDSDGKRIYAEMVGDAYDSTSPFSAESYDAAALIMLAMQAAGS
AEPGDYKDHVMDVANAPGEEILPGELAKGLKILAEGGEIDYVGASAVELIGGGESAGNYREMEMKDGKVTTVRFR

Sequences:
NA

Specific function: NA

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA