Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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The map label for this gene is dctD

Identifier: 159043745

GI number:

Start: 1235704

End: 1237050

Strand: Reverse

Name: dctD

Synonym: Dshi_1196

Alternate gene names: NA

Gene position: NA

Preceding gene: 159043746

Following gene: 159043744

Centisome position: NA

GC content: NA

Gene sequence:

>1347_bases
ATGAGTGCAGCGCCCGAGACCATTCTCTTTGTCGATGACGAGGAGCCCCTGCGCCACGCGGCGGCGCAAACCCTGCAACT
GGCGGAATTCGACGTCGCGTGTTTTGCCGAGGCCGAGGCCGCCCTGCCCCGGATCGCCCGCGATTTCCCCGGCATTCTGG
TCACCGACATCCGCATGCCCGGCATGGACGGCACGACGCTGATGGCCCGCGCGCTGGAGATCGACCCGGAGTTTCCGGTG
ATCCTCGTGACCGGCCACGGCGACGTGGACCTGGCGGTGCAGTCCATGCGCGACGGGGCCTATGATTTTCTGGAAAAACC
CTACGCACCCAGCCGTCTGGTCGCCAGCGTGCGCCGGGCGCTCGACAAGCGCCGCCTGACCCTCGACAACCGCCAGCTGC
GCGCCGCCATGGGCCGCCGCGACCCGGTGGAGGCCCGGCTCACCGGGCGCAGCGCGGTGATGGTCGCCCTACGTCAGCAG
CTGCGCGCGGTGGCGGGCACGGATGCGGATGTGCTGATCGTGGGGGACACGGGCACGGGCAAGGAGGTCGCGGCCCGCGC
GCTCCACCGCGCCAGCACCCGCAGTACGGGGCCTTTCCAGCATATCAACTGCGCCGCCCTGCCCGCCGACCTGATCGAGA
GCGAGCTTTTTGGGCATGAGGCCGGCGCCTATCCCGGGGCGATGCGCGCGCGGTTCGGCAAGTTCGAGGCCGCGCGGGGC
GGGACGGTGTTCCTGGATGAGATCGACAGTTTGCCCCTGCCGCTCCAGGCCAAGCTGCTGCACGCGATCCAGAACCGGAC
GGTGACGCGGCTCGGCTCGAACGATCCGGTGCATCTCGACATCCGCTTCGTCGCCGCCAGCAAGAAGGACCTCGAAGCCG
AGGCCGCCGCGGAGCGATTTCGGGCCGACCTGCTCTACCGGCTGAACGTGGTGACGGTGGGGCTGCCACCGCTGGCGGAG
CGGCGGGAGGATATTCCGCTGCTGTTCGCGCAGCTCGCGACCGAGGCCGCGGCGCGCTACAAGCAGCCCGCGCCGGAGAT
CTCGGGCGCGATCCTGACCGCGCTCGCGGCCCGCGACTGGCCCGGCAACGTGCGCGAGCTGCGCAATGCCGCCGACCGCT
ACGTACTGGGGCTGGATCTTGCGCTGACCAACACCGCCGAAGGCGCGTCCATGGGGTTGGCCGAGCGGATGGCGGCCCAT
GAGAAGGCGCTGATCGCCGCGAGCCTCGCAGCCCATGGCGGGCGGCTCAAGGATACCTACGCGGCGCTCAACCTTTCGCG
CAAGGCGCTCTACGAGAAGATGCAGAAGCACGGGCTGTCCCGAGACACCTTCGCCGAGGAAGACTGA

Upstream 100 bases:

>100_bases
ACGGCACGCTGGAGGCCGAGAATGCCCCCGGGGGCGGTGCGGTCTTCCGGTTGGTCCTGCCCGCCGCGGCCGCCTCCCGC
GCCGCCGGGACCGCGGCGGG

Downstream 100 bases:

>100_bases
CGCGCGCCACCCGGGCCGGGCCAAGCGGTTTCGAAACCGCTTGGAGGCGCGGAGCGGCGCGCGGGGCGCGTCCGGGACAA
CTGCGGCGCCGCACGGCCGG

Product: two component, sigma54 specific, transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>448_residues
MSAAPETILFVDDEEPLRHAAAQTLQLAEFDVACFAEAEAALPRIARDFPGILVTDIRMPGMDGTTLMARALEIDPEFPV
ILVTGHGDVDLAVQSMRDGAYDFLEKPYAPSRLVASVRRALDKRRLTLDNRQLRAAMGRRDPVEARLTGRSAVMVALRQQ
LRAVAGTDADVLIVGDTGTGKEVAARALHRASTRSTGPFQHINCAALPADLIESELFGHEAGAYPGAMRARFGKFEAARG
GTVFLDEIDSLPLPLQAKLLHAIQNRTVTRLGSNDPVHLDIRFVAASKKDLEAEAAAERFRADLLYRLNVVTVGLPPLAE
RREDIPLLFAQLATEAAARYKQPAPEISGAILTALAARDWPGNVRELRNAADRYVLGLDLALTNTAEGASMGLAERMAAH
EKALIAASLAAHGGRLKDTYAALNLSRKALYEKMQKHGLSRDTFAEED

Sequences:
NA

Specific function: NA

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA