Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159043422

GI number:

Start: 885921

End: 887960

Strand: Reverse

Name: Not Available

Synonym: Dshi_0870

Alternate gene names: NA

Gene position: NA

Preceding gene: 159043423

Following gene: 159043421

Centisome position: NA

GC content: NA

Gene sequence:

>2040_bases
ATGACGCAAGGTCAGAGGGCATCTGGACAGGATGCGGTAGCGCACTCGAAAGAAGGCTTCAAACCTTTGAACACAAGCAA
TTTTTCAGTAGCTTATCATTTCAATCAAGGGCACTGTTCCCGCCCGACACGTTTGAAGAACCAAACTCTGGAGCTCGACT
TCGATGCGTCCAAATCCTGTCCAGGTGCACCCTTCCCGGTGGAAGCAGAGCGGTCGGTGCATCCCCAAACCCAGCCCTCC
GCTCTGTTCAAGCCCGAGCAGGGGTCCGTAATGAGTACTGGTCCCGAGCAGGGCACGACCCAGCTGGTCAAGCTTTATGT
ACTTGGCCCGCTGGGTCTCTTTTCTGCCGGGGACCGAAATCTGACACCGCGGGGCAAGAAGGCCCAGGGTCTGCTGGCGC
TTCTGGCGCTGGCTCCGCGGGGGCAGCGTACCCGGGTCTGGTTGCGCGACAAGCTGTGGAGTACGAGTGACGAACAGAAA
TCTGCATCCTCCCTGCGGCAGACGGTGTTCGAGTTGCGCAAGGACCTGGGCGCGCTGGCCGATGAGATCCTCGACATCAA
CCGGATGTCGATCGGCCTGCGGCTCGACCGGGTCTGGATCGACCATGCCACGGTGATGGGAGATCCCGCGCAGCTGCACG
AGCTGGAGATCACCGAGGACACCGAACTGCTCGAAGGGATCGACGTGGTCGACGAGGAGTTCGAGGACTGGCTCCAGATG
GAGCGGCAGATCTGGTACGACAAGGCGACAGACCTGCTGGAGGCGCATCCGCGCCCCGCCCCGGCGGCCCGGCCGACCCC
GGCGCAGACCCGCGGGCTGCTGGTGCCTGCGCGCAGCACCGAGGATCTGAGCGAGACGCAGGCGCCGCAGACCTGCTCCA
TCGGGTTTCTGCCCAACATCCAGCAGGGCTGCGACGGGGCGACCCAGCACCTGGCCGATTACGTGCTGGAAGGGGTGGCG
CGGAACCTGCGGGAGTTCGAGCCGGTGGCGGTGTTCGATTTCCGCGATCCGGGCGTCCATTCGGACCGGTTCACCAATGC
ATTCGAGACCGAGTATTATACCCGCGTGCGGACCTTGCAGGTGCGCGACAGCCTGACCCTGACGTTTTTCCTTTATCGGT
CCAGCCGGATGGCGCTGGAATGGTCCCAGTCGATCCAGACCTCCGCGGACGAGATCGTGCAGAATTCCATGCTGCTGGAG
GGGTTCATCGCGCAGAATGTCGACCGGATGGCCAAGTCGATGTTCGAGGACCGGTTGCGGATGCTGGACAACCGCGAGGA
CTGGCCGCCGAAGGTCGGGTATTCGGCGCTGAACCTGATGTTCAAGCTGGACGAGAACGCGCTGAGCAACTCGGAATCCA
TGCTGCTGCGCGGGGCCGAGAGCGAAGAGGACAGCCCGATCTACCCGGCCCTGCGCGCCTATCTGACGACCTTCAAGCTG
GGCGAGAACATGGGGGTTTTGAACCGCGGCGAGCTGGAGGATGCGCGCGCCAACGCCGAGGCCGCCCTGGGGCAGAACCC
GTTCAACTCGATCTCGCTGGCCTGTATCGCCCATGTGATGGGCTATGTGTTTCACGAGCATGACATGGCCGGCGGGCTGC
TGGAGCAGGCGCTGAACCTGAACGCGTCGCAACCTTTCGTGTGGGATCACTACGCGCTGCACAAGCTTTATTCCGGGGAG
TTCGAGGCGGCCTACCGCGCCGCCGAGCGGGGCGCGGCCCTGGGTGCCTTCAGCCCGATCAGCTACAGCTACGACACCAC
GCTGGCGATGGCCGCAACCATGGCGGGCGATCATCGGCGCGCGATCATGGCCGGGCAGCGGGCCCTGCGCAAACAGCCGC
GCTTTGCCGCCGCGATGCGGTATCTGTTGCTGAACTACGCAAAGCTCGGGCGCGAGGCGGAGGCCCAGGAGATGTTCACG
CGGCTGACCGCCGTGGACCCGGATTTCGGCGACCCGGAGGTGCAGAAGGAGCGCTTCCGCTTTGCCCAGAAACAGGACGA
GACCAACGTTCTGAGCATCATAAAAAGACTGACATCGTGA

Upstream 100 bases:

>100_bases
CCGCAAGGCCTTGGAAACAAAGGTTAACGGCGCCGGCCCCATCCCAGGATCACGCCACGCGACAGGGTGTTAGGAATCAC
TAACAGTTTCCTAACGGTAG

Downstream 100 bases:

>100_bases
GGGGATGACCCATGGAAGACCGGCCGGAGGACGACGATATTCTTCAAAGCCACAAGTTCGAAGTGACCGCCGTGGGGCTG
AAGCTGTCGGGGATGGACGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>679_residues
MTQGQRASGQDAVAHSKEGFKPLNTSNFSVAYHFNQGHCSRPTRLKNQTLELDFDASKSCPGAPFPVEAERSVHPQTQPS
ALFKPEQGSVMSTGPEQGTTQLVKLYVLGPLGLFSAGDRNLTPRGKKAQGLLALLALAPRGQRTRVWLRDKLWSTSDEQK
SASSLRQTVFELRKDLGALADEILDINRMSIGLRLDRVWIDHATVMGDPAQLHELEITEDTELLEGIDVVDEEFEDWLQM
ERQIWYDKATDLLEAHPRPAPAARPTPAQTRGLLVPARSTEDLSETQAPQTCSIGFLPNIQQGCDGATQHLADYVLEGVA
RNLREFEPVAVFDFRDPGVHSDRFTNAFETEYYTRVRTLQVRDSLTLTFFLYRSSRMALEWSQSIQTSADEIVQNSMLLE
GFIAQNVDRMAKSMFEDRLRMLDNREDWPPKVGYSALNLMFKLDENALSNSESMLLRGAESEEDSPIYPALRAYLTTFKL
GENMGVLNRGELEDARANAEAALGQNPFNSISLACIAHVMGYVFHEHDMAGGLLEQALNLNASQPFVWDHYALHKLYSGE
FEAAYRAAERGAALGAFSPISYSYDTTLAMAATMAGDHRRAIMAGQRALRKQPRFAAAMRYLLLNYAKLGREAEAQEMFT
RLTAVDPDFGDPEVQKERFRFAQKQDETNVLSIIKRLTS

Sequences:
NA

Specific function: NA

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA