| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
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The map label for this gene is rimM
Identifier: 159042900
GI number:
Start: 331421
End: 331921
Strand: Reverse
Name: rimM
Synonym: Dshi_0344
Alternate gene names: NA
Gene position: NA
Preceding gene: 159042901
Following gene: 159042898
Centisome position: NA
GC content: NA
Gene sequence:
>501_bases ATGAGCGACCGGGTCTGTGTCGGCGCGGTGGCCGGGGCCTTCGGGGTGCGCGGGGAGCTGCGGATCAAGAGCTTCTGCGC GGTGCCCGAGGATATCGCCAGCTACAACCCCCTGAGTTTCGAGGATGGGCGCGAGACGACCCTGCGCCTGACCGGGCAGA TCAAGAACGGCCTGTCGGGGCGGCTGACCGGCGTGAGCAACAAGGAGGCCGCCGACGCCCTGCGCGGCGCGCGGCTCTAT GCGCCGCGGGACCGGCTGCCGCGTCTGCCCGATGACGAGTTCTACCATGCCGACCTGATCGGTCTGGCCGTGCATGACAC GGGCGGCACCCTTCTGGGCAAGGTGGCGGCGGTACACAATCACGGGGCGGGCGACCTGCTGGAGCTGCGCGGGCCGGGGC TGAAGGGAAGCGTCCTGCTGCCCTTTACCCGGGCGGTGGTCCCGACCGTGGACCTGGACGCGGGCCGGATCGTCGCCGAC CCGCCCGAAGGCTTGTTCTGA
Upstream 100 bases:
>100_bases ATATCGGCATGCAGCTGGAACGGCGGCTGGCCGAGGAACGCTGCCTCTCCGCCGGGGGCGCGCCCGATGCGCGCGGCGTC TGCACCGGGGTGGCCGCGCC
Downstream 100 bases:
>100_bases GCCCGCAGCCCGCAGGCAGTCAGGCCGCCGCGAGGCGTGTGGCGGTCTTCTGCAATTGCAGAAGCCTCTCCTGCTGAAAC GCGGAGCGTTGGGAGGCCAC
Product: 16S rRNA-processing protein RimM
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>166_residues MSDRVCVGAVAGAFGVRGELRIKSFCAVPEDIASYNPLSFEDGRETTLRLTGQIKNGLSGRLTGVSNKEAADALRGARLY APRDRLPRLPDDEFYHADLIGLAVHDTGGTLLGKVAAVHNHGAGDLLELRGPGLKGSVLLPFTRAVVPTVDLDAGRIVAD PPEGLF
Sequences:
NA
Specific function: NA
COG id: COG0806
COG function: function code J; RimM protein, required for 16S rRNA processing
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA