Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159042695

GI number:

Start: 137186

End: 138925

Strand: Reverse

Name: Not Available

Synonym: Dshi_0139

Alternate gene names: NA

Gene position: NA

Preceding gene: 159042698

Following gene: 159042694

Centisome position: NA

GC content: NA

Gene sequence:

>1740_bases
ATGGCGCCACGCACCTCCCCGAACGCGGGCAAGGGGCTCGAAGAACTGGGTGCGATCCGTCGCGCCAACATGCCGTTGTT
CGCCTGGGTCTTCGTGTTCTCGATCTTCGTGAACGCCCTGATGCTGACCGGGCCACTCTACATGTTGCAGGTTTATGACC
GGGTCCTGGGCAGCCAGTCGGAAGAGACCCTGCTGGCGCTGTCGGTACTGGTCGCATTTCTGTTTTTGATGATGGGGATC
CTGGATTGGGCCCGCGGGCGTGTGTTGGCGCGGGCCGGGGCGCGCATGCAGGACACCCTAGACCAACGGGTGTTTTCGGC
GTCGTTGCGCAAATCTTTGCGCCAGGGGCAGACCACGGCGTCGACCGGGTTGCGCGACCTGGAGTCGATGCAGCGACTGT
TGTCTTCGCCGGCTCTTCTGGCGGTGTTCGACATTCCGTGGACGCCGCTCTTCGTGGCCGCGATCTTCATGTTTCACCCT
TGGCTGGGCTATCTCGCCCTGGTGGGCGGGACATTCCTGATCCTGGTGACGGTGCTGAACCAATGGCTGACAAGTCGCCC
GGTCAGCAAGGCGAACGAGGCCTCGGCCCGCGCCGAGATGATGTCGCAGCAACTGGCCGGGGGCGCGGAAACCGTCGAAT
CGCTCGGCATGCGCGGCGCGGCCTTCACACGCTGGAGCAAGGTGCGCGCGGAGTCCCTGTCGGAGACGCTGACATCCTCG
GACCGGACCGGCGGCTTTTCCACCCTGACCAAGACATTCCGGCTGTTCCTGCAATCGGCGATGCTCGGGCTTGGCGCATA
TCTCGTCCTGCAGGGGCAATTGACCGCCGGGGCGATGATCGCAGGCTCGATCCTGATGGGCCGGGCCCTGGCGCCGATCG
AGATGGCGATCGGACAATGGCCGCTGGTGCAGCGGGCGATGAAGGGACGGCGCGACCTGATCGAGTTGCTGGATGCCATC
CCGCCCGACCCGGAGCGGACCCCCCTGCCCAAACCGAAGGCGCGGTTGGTGGTGGAGCAGCTGATCGTGGTGCCCCCGGG
CGAAGCGCAAGCGGCCCTGCGGAGTGTGAGCTTCACGGTCTCGCCCGGGGAGGCGTGCGGGGTGATCGGGCAATCGGGCG
CGGGCAAATCGACCCTGGCGCGGGCGCTGACCGGCATCTGGCCCGTGGCGGGCGGCAAGATCCGGCTCGATGGCGCGGCG
CTGGACCAGTTCGGCCCGGATGTGCTGGGCACCCATATCGGCTACCTGCCGCAACAGGTTGTGCTCTTCGACGGCACCAT
TGCCGAGAACATCGCCCGGCTGGCCCCGCAGCCCGATGCCCAGGCGGTGGTGGATGCCGCCAAGCGTGCGGACGCCCACG
AGATGATCCTGAAGCTGCCCAAGGGCTATGACACGATGTTGCTCGGCAGCCAGACCCGGCTTTCAGGCGGGCAGATGCAG
CGGATCGGCCTGGCACGCGCACTCTACGGCGATCCGGTGCTGCTGGTGCTGGACGAGCCGAACTCGAACCTCGACAACTC
CGGCAGCCAGGCCTTGAATGCGGCCGTGGCGCGGATGAAAAAGGATGGCAAGGCGGTGCTGATCATGGCCCACCGGCCCG
CAGCGATCGAGCAATGCGATACGCTTCTGGTGCTGGAGGGCGGCTCGCGCAAGGCTTTCGGGCCACGGGACGAGGTGCTG
AAATCCATGGTGTCGAACCACAAGGAAATCCTGAAGAAAGCCGCTGGAGGCGTGTCATGA

Upstream 100 bases:

>100_bases
CTACAGCATTTATAGAACCCACGTTAAACAAGTGGCGTTAAGAATCGGCGCAGCCTCGCCAGTTCGGCGCGCACAGACAC
ATACGGAGACAGGGATCGCC

Downstream 100 bases:

>100_bases
CCGGACCCGCGGCCAAGAAATTTCCCGCCCGGCGGCAGCTCTTGATCGGTGGGATTGCCCTCGCGATCCTGGTCGGCGGC
TTCGGCAGCTGGTCGGTGAT

Product: type I secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>579_residues
MAPRTSPNAGKGLEELGAIRRANMPLFAWVFVFSIFVNALMLTGPLYMLQVYDRVLGSQSEETLLALSVLVAFLFLMMGI
LDWARGRVLARAGARMQDTLDQRVFSASLRKSLRQGQTTASTGLRDLESMQRLLSSPALLAVFDIPWTPLFVAAIFMFHP
WLGYLALVGGTFLILVTVLNQWLTSRPVSKANEASARAEMMSQQLAGGAETVESLGMRGAAFTRWSKVRAESLSETLTSS
DRTGGFSTLTKTFRLFLQSAMLGLGAYLVLQGQLTAGAMIAGSILMGRALAPIEMAIGQWPLVQRAMKGRRDLIELLDAI
PPDPERTPLPKPKARLVVEQLIVVPPGEAQAALRSVSFTVSPGEACGVIGQSGAGKSTLARALTGIWPVAGGKIRLDGAA
LDQFGPDVLGTHIGYLPQQVVLFDGTIAENIARLAPQPDAQAVVDAAKRADAHEMILKLPKGYDTMLLGSQTRLSGGQMQ
RIGLARALYGDPVLLVLDEPNSNLDNSGSQALNAAVARMKKDGKAVLIMAHRPAAIEQCDTLLVLEGGSRKAFGPRDEVL
KSMVSNHKEILKKAAGGVS

Sequences:
NA

Specific function: NA

COG id: COG4618

COG function: function code R; ABC-type protease/lipase transport system, ATPase and permease components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA