| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
Click here to switch to the map view.
The map label for this gene is pmbA
Identifier: 159042620
GI number:
Start: 64554
End: 65900
Strand: Reverse
Name: pmbA
Synonym: Dshi_0064
Alternate gene names: NA
Gene position: NA
Preceding gene: 159042621
Following gene: 159042619
Centisome position: NA
GC content: NA
Gene sequence:
>1347_bases ATGCCGCAAGACCTGTCTGCCCTGACCGATGCCCTCCTGAGTGCTGCCAAGGCCGCGGGGGCCGAGGCCGCCGATGCCAT GGCGGTGAAGGGCACCTCGGTGTCCATCGACGTGCGCGCCGGTGCCCTCGAACAGGCCGAGCGCTCCGAAGGGATCGATC TCGGCTTGCGGGTCCTGCTGGGCCAGAAACAGGCGCTGGTCTCGGCCTCCGATACCTCGGGCGACACGATCCGCGAGATG GCCGAACGCGCCGTGGCCATGGCCGCCGAGGCACCGGACGACCCCTATATCGGGCTCGCGGACCCGGACGCGCTCGCCAC CTCCTGGGACATCGACGCGCTGGAGTTGCAAGACCCCAGCCCGGAGCCGGACCCCGCCGCGCTCGAGGACGACGCGCGAC GTGCGGAGGCCGCGGCCCTCGCCCTGCCGGGCATCAGCCAGGTCCAGTCCGCCAGCGCGGGCTATGGCCGCCGCGCCGTG CACCTGGCCACCAGCGACGGGTTTTCGGGCGGCTACGCACGTACCGACCGTGGGCTCTCTGCCGTGGCCATCACCGGCAC GGGCACCGGGATGGAGCGTGACTACGCAGGCGAGAGCCGGATCTTCCAGGCCGACCTGCCCAGCCCCGAAGAAGTCGGCA AACGCGCCGCCGAACGCACCCTCGCCCGGGCCGGGGCGCGCAAACCGCCCACCGGCGCCTTCCCGGTGCTCTACGACGAA CGGATTTCCAGCGCCCTGATCGGACACCTGCTGGCCGCGATCAGCGGCAGCGCCATCGCCCGCGGCTCCAGCTGGTTGCG CGACGCGCTCGGCACGCAGGTGCTGCCCGCGGGCCTGAGCCTCGTCGAGGATCCCCACCGCCCGCGGGCCACGGGATCAC GTCCCTTCGATGCCGAGGGCCTGCCGACCGCGCGTCGACTCATTGTCGACAACGGGGTGCTGCAGGGCTGGACGCTCGAT CTGGCCACGGGCCGCAAGCTGGGCCTGCCGAGCACGGCCAATGCCGCCCGCGGCACCTCCAGCCCGCCATCGCCCTCGGT GACCAACGTGGCCCTGACCCAGGGCGACAAGCCCGCCGAAGCACTCGCACGGGACATGGGCACCGGGCTCTGGGTGACCT CGATGATCGGCGCCTCGATCAATCCCACGACCGGGGATTACTCCCGCGGGGCCAGCGGCTTCTGGGTCGAGAAGGGCGAG ATCGCCTACCCGGTGAACGAATGCACCATCGCGGGTAACCTGCGCGACATGCTCAAGACCCTGGTGCCCGGCAACGACGC CCGGCCCCATCTGAGCCGCGTGATCCCCAGCCTGCTGGTCGAAGGACTGACGATTGCCGGCGCCTGA
Upstream 100 bases:
>100_bases CCAACGGGATGCGCCTGCGCTGAGCGAAGCCGGACAACCGCTTGCACCCGGGGGCGGCGCGACCTAGGTCAGAGCGAGTG TTTCCCGGAGAACCTGTGCC
Downstream 100 bases:
>100_bases CCTCGCGCTCCTGATCGACGCGGCGCAGGCGGCCGGCCGGATCGCCGAGAAGCACTGGCGTCAGGACCCCGAAGCCTGGG ACAAGGCCGGCGGTGCAGGC
Product: peptidase U62 modulator of DNA gyrase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>448_residues MPQDLSALTDALLSAAKAAGAEAADAMAVKGTSVSIDVRAGALEQAERSEGIDLGLRVLLGQKQALVSASDTSGDTIREM AERAVAMAAEAPDDPYIGLADPDALATSWDIDALELQDPSPEPDPAALEDDARRAEAAALALPGISQVQSASAGYGRRAV HLATSDGFSGGYARTDRGLSAVAITGTGTGMERDYAGESRIFQADLPSPEEVGKRAAERTLARAGARKPPTGAFPVLYDE RISSALIGHLLAAISGSAIARGSSWLRDALGTQVLPAGLSLVEDPHRPRATGSRPFDAEGLPTARRLIVDNGVLQGWTLD LATGRKLGLPSTANAARGTSSPPSPSVTNVALTQGDKPAEALARDMGTGLWVTSMIGASINPTTGDYSRGASGFWVEKGE IAYPVNECTIAGNLRDMLKTLVPGNDARPHLSRVIPSLLVEGLTIAGA
Sequences:
NA
Specific function: NA
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA