| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is yeaC [H]
Identifier: 159041991
GI number: 159041991
Start: 1508730
End: 1509686
Strand: Reverse
Name: yeaC [H]
Synonym: Cmaq_1428
Alternate gene names: 159041991
Gene position: 1509686-1508730 (Counterclockwise)
Preceding gene: 159041992
Following gene: 159041990
Centisome position: 72.67
GC content: 46.19
Gene sequence:
>957_bases ATGAGCAGTGTTACTGAGGCCCTTAACAGAATTAGGGGTTTCATTAGTGGAGTCTTCATGGGTAACGACTACGCAATTAA TGTGCTCCTAGCCACAGTCATGGCTGGTGGCCACGCATTATTAATGGGGCCTGTGGGTAGTGGTAAGACAACCTTAGCCA AGGCCCTAGCCAAGGCCATTGGGGGTAGTTTCAAGAGGGTTCAGGTAACTAATGAGACACTCCCATCAGACATACTCGGC TTCGTGGCCTATACTAGGGATGGGGAGGCTAGGGTTGTTAAGGGTCCAATATTCGCCAACGTTGTTCTACTAGATGAGAT TAATAGGGCCCCGCCAAGGACATTATCAGCCCTCCTTGAGGCAATGCAGGAGGCTCAGGTTACGTTGGATGGAAACCCGC TTCAATTACCTAAACCTCATGTGATTTTAGCCACGATGAATGTTGAGGAGGTGGAGTTGGGTATAACTAGGCAATTACCC ATAGCCGTGTTGGATAGGTTCATGGCTAGTTTAACCATAGGTTACGTTGATAGGGATAATGAGAGACGCATCCTATCCAG TCTCAATAGTATTGAATCCATGGTGAATTCACGGGATAATAACCCTAAGGTCATTGATGACTTCCTGGACTTAATGGACC AAGCCTCTAGGGTTTACGCTAGTGATGATGTTATTGATTACATAATGAATATTACTGACGCCATTAGGAGTGATGGGAGG CTTCTACTACCATTAAGCACCAGGGCTTCAATAAGCGTACTTAAGTTATCAAGGGCCATAGCCCTACTCAACGGTAGGGA TTACGTAACCCCAGATGACGTTAAGGTGGCTGTACCACCGGCATTAAGCCATAGGATTATTCTAAGGCCTGAATTCGCCA ACACTCTAAGGCCCATTGATGTAATTAACGATGCACTCAATAGGGTTCAGCCACCAGTCTATATGGTAACTGAGTGA
Upstream 100 bases:
>100_bases AGTCTAAGGCCTGTGAACTACATTATGGTTATGGCTCCATTAATCATAGCCTCATTGGCTTTGGCAAAACATAAAAACAC TTAATCAACCCGCATACTGA
Downstream 100 bases:
>100_bases TGGTTAAACCATGAGGCTTAACACCAGTGTGGTTAGGAAGATACTACCGGCATTATACATACTGCTTGGTGTAAGCAACC CAGTGGTGCTTGCCTCATCA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSSVTEALNRIRGFISGVFMGNDYAINVLLATVMAGGHALLMGPVGSGKTTLAKALAKAIGGSFKRVQVTNETLPSDILG FVAYTRDGEARVVKGPIFANVVLLDEINRAPPRTLSALLEAMQEAQVTLDGNPLQLPKPHVILATMNVEEVELGITRQLP IAVLDRFMASLTIGYVDRDNERRILSSLNSIESMVNSRDNNPKVIDDFLDLMDQASRVYASDDVIDYIMNITDAIRSDGR LLLPLSTRASISVLKLSRAIALLNGRDYVTPDDVKVAVPPALSHRIILRPEFANTLRPIDVINDALNRVQPPVYMVTE
Sequences:
>Translated_318_residues MSSVTEALNRIRGFISGVFMGNDYAINVLLATVMAGGHALLMGPVGSGKTTLAKALAKAIGGSFKRVQVTNETLPSDILG FVAYTRDGEARVVKGPIFANVVLLDEINRAPPRTLSALLEAMQEAQVTLDGNPLQLPKPHVILATMNVEEVELGITRQLP IAVLDRFMASLTIGYVDRDNERRILSSLNSIESMVNSRDNNPKVIDDFLDLMDQASRVYASDDVIDYIMNITDAIRSDGR LLLPLSTRASISVLKLSRAIALLNGRDYVTPDDVKVAVPPALSHRIILRPEFANTLRPIDVINDALNRVQPPVYMVTE >Mature_317_residues SSVTEALNRIRGFISGVFMGNDYAINVLLATVMAGGHALLMGPVGSGKTTLAKALAKAIGGSFKRVQVTNETLPSDILGF VAYTRDGEARVVKGPIFANVVLLDEINRAPPRTLSALLEAMQEAQVTLDGNPLQLPKPHVILATMNVEEVELGITRQLPI AVLDRFMASLTIGYVDRDNERRILSSLNSIESMVNSRDNNPKVIDDFLDLMDQASRVYASDDVIDYIMNITDAIRSDGRL LLPLSTRASISVLKLSRAIALLNGRDYVTPDDVKVAVPPALSHRIILRPEFANTLRPIDVINDALNRVQPPVYMVTE
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 34688; Mature: 34556
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVTEALNRIRGFISGVFMGNDYAINVLLATVMAGGHALLMGPVGSGKTTLAKALAKAI CCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH GGSFKRVQVTNETLPSDILGFVAYTRDGEARVVKGPIFANVVLLDEINRAPPRTLSALLE CCCCEEEEECCCCCHHHHHHHHHEECCCCCEEEECCHHEEEEEEECCCCCCCHHHHHHHH AMQEAQVTLDGNPLQLPKPHVILATMNVEEVELGITRQLPIAVLDRFMASLTIGYVDRDN HHHHCEEEECCCCCCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCC ERRILSSLNSIESMVNSRDNNPKVIDDFLDLMDQASRVYASDDVIDYIMNITDAIRSDGR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCE LLLPLSTRASISVLKLSRAIALLNGRDYVTPDDVKVAVPPALSHRIILRPEFANTLRPID EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHCCHHH VINDALNRVQPPVYMVTE HHHHHHHHCCCCEEEECC >Mature Secondary Structure SSVTEALNRIRGFISGVFMGNDYAINVLLATVMAGGHALLMGPVGSGKTTLAKALAKAI CHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH GGSFKRVQVTNETLPSDILGFVAYTRDGEARVVKGPIFANVVLLDEINRAPPRTLSALLE CCCCEEEEECCCCCHHHHHHHHHEECCCCCEEEECCHHEEEEEEECCCCCCCHHHHHHHH AMQEAQVTLDGNPLQLPKPHVILATMNVEEVELGITRQLPIAVLDRFMASLTIGYVDRDN HHHHCEEEECCCCCCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCC ERRILSSLNSIESMVNSRDNNPKVIDDFLDLMDQASRVYASDDVIDYIMNITDAIRSDGR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCE LLLPLSTRASISVLKLSRAIALLNGRDYVTPDDVKVAVPPALSHRIILRPEFANTLRPID EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHCCHHH VINDALNRVQPPVYMVTE HHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]