| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is mmlH [H]
Identifier: 159041929
GI number: 159041929
Start: 1439346
End: 1440497
Strand: Reverse
Name: mmlH [H]
Synonym: Cmaq_1365
Alternate gene names: 159041929
Gene position: 1440497-1439346 (Counterclockwise)
Preceding gene: 159041935
Following gene: 159041918
Centisome position: 69.34
GC content: 42.62
Gene sequence:
>1152_bases ATGGGTATTAGGAGTATCCTACTGGTACTTAGTGTCCTTGTACCATTCCTCATGAGTGCCTTCTGCATCTTCTCAGTGGT TTACCTATTTCCTGAAATATCATTATCAATACACGTTACTGTTACCGCACTTACCTTGATGGTTACATTATCGTTTATTG GTGGCGCTATTGGTGGTGTGGTTTTCGGTATGATTGCTGATGCATACGGTAGGCGTATTGGGCTTATGACATCAGTAATA TTATTCTCACTGATGACATTACTAGCGGGCTTTGCCAGGACGCTGTGGGAATTTTACGTGGCGTGGTTCCTAGTGGGATT CGGGGTTAATCCTGAAAATGGTATAACTTATGCCGTTATTGCTGAGAATTGGAGGGGCGGTAGGGGTTTAATTGGTGGTT TAACCCAAGGCCTCTACTTCATTGGCATCATGCTTGATGCACTAGTATACAGCATCATACATGAATGGAACCTAGTACTA ATAGTTACTGGTGCTGTAAGTTTACTCTCATCACTACCATGGTTAATAATCATGCCTGAAACAGTATCAAGGGTTGGCCT TAGGAGGATTAATTATAGTGAGGTTCTTAAGGATAGGTTCATGTGGTTAACAATACTGGGTATTGTTATTGTAGCCTCAG CATTCATGCTCACAGTGCCCCTGGTTAGCCTGGCTCCAACTTACCTGAAGCAGATAGGTATCAGTAACCTAAACCTATGG CTACTGGTGCTACCGGTAATAGGTGCATTGGCCTACACTTTAGCTGGCTATTTATCAGACCTCTATGGTAGAGTTAGGGT TCTAGTGGCGTTAAGCATTATTGCTCTTGCATCATCAGTGGCATTATTAGTTACCGCTGATTTAGGTCTCTTGGATTACA TGATACCGTCAATAGCCTTAACCTACGTCTCATCATCAGTATTCTCATACCTAGGAGTATTAATGAGTGAACTCTACCCA GTTAACATTAGGGCCACTGCATCAAACCTAGTATTCACACTGGGTAGGGTATTAGGTGGTATTGGACCACCCTTAATAGC ATTCACCTTTGCATCAAACCTAGGGCTTGGGTTAGGGGTGGTAATGCTCATAAGCGCATTCCTGTCACTGGTATCTGCAG TAATACTTGGCATAAAGTTCTCATTAAGATAA
Upstream 100 bases:
>100_bases CTTCCCTCCTGTCTAATTGCTATATAATGATGCCTCCAATCCTGTGAATTTTTAAGCATATTAGGGGTAATTTTTAAACT GTATCTAGAGGCATGAAATT
Downstream 100 bases:
>100_bases GCATAAGCACTTAATTGCATTATTCATTAACATGGTCATTACCACTTAGCAATATGCCTCAATGGGTTAAATGCTCATTA ACTAACTATGCCGTAACCCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGIRSILLVLSVLVPFLMSAFCIFSVVYLFPEISLSIHVTVTALTLMVTLSFIGGAIGGVVFGMIADAYGRRIGLMTSVI LFSLMTLLAGFARTLWEFYVAWFLVGFGVNPENGITYAVIAENWRGGRGLIGGLTQGLYFIGIMLDALVYSIIHEWNLVL IVTGAVSLLSSLPWLIIMPETVSRVGLRRINYSEVLKDRFMWLTILGIVIVASAFMLTVPLVSLAPTYLKQIGISNLNLW LLVLPVIGALAYTLAGYLSDLYGRVRVLVALSIIALASSVALLVTADLGLLDYMIPSIALTYVSSSVFSYLGVLMSELYP VNIRATASNLVFTLGRVLGGIGPPLIAFTFASNLGLGLGVVMLISAFLSLVSAVILGIKFSLR
Sequences:
>Translated_383_residues MGIRSILLVLSVLVPFLMSAFCIFSVVYLFPEISLSIHVTVTALTLMVTLSFIGGAIGGVVFGMIADAYGRRIGLMTSVI LFSLMTLLAGFARTLWEFYVAWFLVGFGVNPENGITYAVIAENWRGGRGLIGGLTQGLYFIGIMLDALVYSIIHEWNLVL IVTGAVSLLSSLPWLIIMPETVSRVGLRRINYSEVLKDRFMWLTILGIVIVASAFMLTVPLVSLAPTYLKQIGISNLNLW LLVLPVIGALAYTLAGYLSDLYGRVRVLVALSIIALASSVALLVTADLGLLDYMIPSIALTYVSSSVFSYLGVLMSELYP VNIRATASNLVFTLGRVLGGIGPPLIAFTFASNLGLGLGVVMLISAFLSLVSAVILGIKFSLR >Mature_382_residues GIRSILLVLSVLVPFLMSAFCIFSVVYLFPEISLSIHVTVTALTLMVTLSFIGGAIGGVVFGMIADAYGRRIGLMTSVIL FSLMTLLAGFARTLWEFYVAWFLVGFGVNPENGITYAVIAENWRGGRGLIGGLTQGLYFIGIMLDALVYSIIHEWNLVLI VTGAVSLLSSLPWLIIMPETVSRVGLRRINYSEVLKDRFMWLTILGIVIVASAFMLTVPLVSLAPTYLKQIGISNLNLWL LVLPVIGALAYTLAGYLSDLYGRVRVLVALSIIALASSVALLVTADLGLLDYMIPSIALTYVSSSVFSYLGVLMSELYPV NIRATASNLVFTLGRVLGGIGPPLIAFTFASNLGLGLGVVMLISAFLSLVSAVILGIKFSLR
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082404, Length=381, Percent_Identity=22.0472440944882, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41236; Mature: 41105
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRSILLVLSVLVPFLMSAFCIFSVVYLFPEISLSIHVTVTALTLMVTLSFIGGAIGGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH VFGMIADAYGRRIGLMTSVILFSLMTLLAGFARTLWEFYVAWFLVGFGVNPENGITYAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE AENWRGGRGLIGGLTQGLYFIGIMLDALVYSIIHEWNLVLIVTGAVSLLSSLPWLIIMPE ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCEEEEECH TVSRVGLRRINYSEVLKDRFMWLTILGIVIVASAFMLTVPLVSLAPTYLKQIGISNLNLW HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLVLPVIGALAYTLAGYLSDLYGRVRVLVALSIIALASSVALLVTADLGLLDYMIPSIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYVSSSVFSYLGVLMSELYPVNIRATASNLVFTLGRVLGGIGPPLIAFTFASNLGLGLGV HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH VMLISAFLSLVSAVILGIKFSLR HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIRSILLVLSVLVPFLMSAFCIFSVVYLFPEISLSIHVTVTALTLMVTLSFIGGAIGGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH VFGMIADAYGRRIGLMTSVILFSLMTLLAGFARTLWEFYVAWFLVGFGVNPENGITYAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE AENWRGGRGLIGGLTQGLYFIGIMLDALVYSIIHEWNLVLIVTGAVSLLSSLPWLIIMPE ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCEEEEECH TVSRVGLRRINYSEVLKDRFMWLTILGIVIVASAFMLTVPLVSLAPTYLKQIGISNLNLW HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLVLPVIGALAYTLAGYLSDLYGRVRVLVALSIIALASSVALLVTADLGLLDYMIPSIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYVSSSVFSYLGVLMSELYPVNIRATASNLVFTLGRVLGGIGPPLIAFTFASNLGLGLGV HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH VMLISAFLSLVSAVILGIKFSLR HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]