Click here to switch to the map view.

The map label for this gene is 159041917

Identifier: 159041917

GI number: 159041917

Start: 1429987

End: 1430718

Strand: Reverse

Name: 159041917

Synonym: Cmaq_1353

Alternate gene names: NA

Gene position: 1430718-1429987 (Counterclockwise)

Preceding gene: 159041918

Following gene: 159041916

Centisome position: 68.87

GC content: 43.72

Gene sequence:

>732_bases
ATGGATATTAAGGCCGTTAAGCAGGCGATTAGGGAGAGAGTTTGGAGAATACTTGAGGAGAGTAATGCGGCTGCATTTCC
AAGACCAGTTTACGGTAGGATACCGAACTTCGTGGGTTCCCAGGAGGCATGTAGATTAGCTTCAACACTCCCTGAGTTTA
AGGAGGCTAGGGTTATTAAGATTAATCCTGATTCACCTCAACGATACTGCAGGGAGCTCGCATTGAGGCACGGTAAACTG
GTTATTGTACCAACCCCCAGGATTAAGGAGGGATTCCTCCTACTTGATTCAAGTAGGATACCGAGGCAGTATTATGATGA
GGCATCAACCATAGGCGGCTCATTCAAATGGGGTATACCCATTAAACCATGGGATGCACCGCAAATAAACCTTGTGATAA
TAGGTTCAGTAGCCGTTAACCCCAGTAACGGTAGGAGACTTGGTAAATCCCACGGCTATGCTGAGATTGAATGGGGAATA
GTTAGTGCATTGGGTAAGGTGAATGAGGATACGCCTGTTTTAACCACTGTTCATGAACTTCAACTGGTTAATGATGAAAT
ACCTAAGGAACCCTTCGACCTACCTGTGGACATTATAGTAACACCCAGCAGGGTTATTAAGGTTAATAGAATTGATGAGA
AGCCGAAAGGAATATACTGGGGGTACGTTACGGATGAAATGATGAATGAGATACCACTCTTAGCGGAATTAAGGAGAATG
AATAATATTTAA

Upstream 100 bases:

>100_bases
TCTCAGCATTAAATAATCATATTGAGGTTGATGACGTTGCCTCACTTTAAAAGATGAAGTTTTAAGTATGCTATAACTTA
GAGAATCCCTTGAAGTTAAC

Downstream 100 bases:

>100_bases
TGAAGCCTTACCCCTCACTTCTAAAACATAGTTAAGCCTAAGTGACATTACGCGTGATTAATGCATTAACGTATGCATAT
TTAATCTCCAATAATTAAAC

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase-Related Protein

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDIKAVKQAIRERVWRILEESNAAAFPRPVYGRIPNFVGSQEACRLASTLPEFKEARVIKINPDSPQRYCRELALRHGKL
VIVPTPRIKEGFLLLDSSRIPRQYYDEASTIGGSFKWGIPIKPWDAPQINLVIIGSVAVNPSNGRRLGKSHGYAEIEWGI
VSALGKVNEDTPVLTTVHELQLVNDEIPKEPFDLPVDIIVTPSRVIKVNRIDEKPKGIYWGYVTDEMMNEIPLLAELRRM
NNI

Sequences:

>Translated_243_residues
MDIKAVKQAIRERVWRILEESNAAAFPRPVYGRIPNFVGSQEACRLASTLPEFKEARVIKINPDSPQRYCRELALRHGKL
VIVPTPRIKEGFLLLDSSRIPRQYYDEASTIGGSFKWGIPIKPWDAPQINLVIIGSVAVNPSNGRRLGKSHGYAEIEWGI
VSALGKVNEDTPVLTTVHELQLVNDEIPKEPFDLPVDIIVTPSRVIKVNRIDEKPKGIYWGYVTDEMMNEIPLLAELRRM
NNI
>Mature_243_residues
MDIKAVKQAIRERVWRILEESNAAAFPRPVYGRIPNFVGSQEACRLASTLPEFKEARVIKINPDSPQRYCRELALRHGKL
VIVPTPRIKEGFLLLDSSRIPRQYYDEASTIGGSFKWGIPIKPWDAPQINLVIIGSVAVNPSNGRRLGKSHGYAEIEWGI
VSALGKVNEDTPVLTTVHELQLVNDEIPKEPFDLPVDIIVTPSRVIKVNRIDEKPKGIYWGYVTDEMMNEIPLLAELRRM
NNI

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI226823322, Length=246, Percent_Identity=40.2439024390244, Blast_Score=172, Evalue=2e-43,
Organism=Homo sapiens, GI226823324, Length=237, Percent_Identity=40.5063291139241, Blast_Score=172, Evalue=2e-43,
Organism=Homo sapiens, GI226823319, Length=246, Percent_Identity=39.0243902439024, Blast_Score=163, Evalue=1e-40,
Organism=Homo sapiens, GI116875838, Length=237, Percent_Identity=39.2405063291139, Blast_Score=163, Evalue=1e-40,
Organism=Homo sapiens, GI226823326, Length=226, Percent_Identity=38.4955752212389, Blast_Score=150, Evalue=7e-37,
Organism=Drosophila melanogaster, GI161078016, Length=243, Percent_Identity=28.8065843621399, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355167, Length=243, Percent_Identity=28.8065843621399, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27503; Mature: 27503

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKAVKQAIRERVWRILEESNAAAFPRPVYGRIPNFVGSQEACRLASTLPEFKEARVIK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCHHHHCCEEEE
INPDSPQRYCRELALRHGKLVIVPTPRIKEGFLLLDSSRIPRQYYDEASTIGGSFKWGIP
ECCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCC
IKPWDAPQINLVIIGSVAVNPSNGRRLGKSHGYAEIEWGIVSALGKVNEDTPVLTTVHEL
CCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCEEHHHHH
QLVNDEIPKEPFDLPVDIIVTPSRVIKVNRIDEKPKGIYWGYVTDEMMNEIPLLAELRRM
HHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECHHHHHHCHHHHHHHHH
NNI
CCC
>Mature Secondary Structure
MDIKAVKQAIRERVWRILEESNAAAFPRPVYGRIPNFVGSQEACRLASTLPEFKEARVIK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCHHHHCCEEEE
INPDSPQRYCRELALRHGKLVIVPTPRIKEGFLLLDSSRIPRQYYDEASTIGGSFKWGIP
ECCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCC
IKPWDAPQINLVIIGSVAVNPSNGRRLGKSHGYAEIEWGIVSALGKVNEDTPVLTTVHEL
CCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCEEHHHHH
QLVNDEIPKEPFDLPVDIIVTPSRVIKVNRIDEKPKGIYWGYVTDEMMNEIPLLAELRRM
HHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECHHHHHHCHHHHHHHHH
NNI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA