| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041901
Identifier: 159041901
GI number: 159041901
Start: 1412962
End: 1413660
Strand: Reverse
Name: 159041901
Synonym: Cmaq_1337
Alternate gene names: NA
Gene position: 1413660-1412962 (Counterclockwise)
Preceding gene: 159041902
Following gene: 159041900
Centisome position: 68.04
GC content: 42.2
Gene sequence:
>699_bases ATGTTCTATGAGTGGGTTAAGCCTGTGGTGAAGGGGGCTGAAGGCTCATTGGGGGGATTATCCATTATAGGTAAGATCAC TGTTGCTTTATCATTTATACCGTATCTTGCATCCTACTGGTTCATGAACCCAATTAGACTAATACCCATTACCGTGACTG GCTTAATAGTGAGCATGACTTACCTAGTATTAATAGGGGATTCAGTAAGGAGACTGAGGCCATTAATCCTGGTTTGGATT CTATCTGAAGCCACCGGATTACTGGTAGTGTTAATGTCCGGGGGAGGGTTAAGTCCAGTGGCATTACTTAACGTAACATT ATTATCAACCCTAATACTAGTGGCATTAACCGGATTCGTGGTTTCACTGGCATTACTCAGGTTAAGTGAAGTGAAGTATA TTCTTAACGTAATGGGTTTAGGTACATTGGGTGATTCACTGGTATTGTCACTGAGGTATCTTCTAAACGCATCAGTCGCC ATGGATGAGGCTTACATGGTTCTTAAGTCACTCGGCAGTGTTAAACCTAGGCTACTGGTTAATTCACTCGTGGCTAATGG CGTAAGGTACTCAATAATACTTGCACAATACATAGAGTACTACGGTATACCCAGTGTTAAGCCGAGGGTAACCTTAAGTA GGCTTGATTCCATAGCCCTAATACCACTAACACTTTACCTAATCCTACTTGCACTATAG
Upstream 100 bases:
>100_bases GCTACCCAGGACCTGCGCTTCGCATCCTTAATAAGGGATAGTGACGTATTCTACGTGAGGGGGCGGGAGGGGTATGTTGC TAAGGTGAGTGTGAGCGAGC
Downstream 100 bases:
>100_bases GTTCATTACATCAGTATGATGAATACTGCACGTGCGGTAAGGAAGCCAGCTGGCTTTCAAGTAATTAACAGCAGTACAAT GCTTTTAATTAGGGCTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MFYEWVKPVVKGAEGSLGGLSIIGKITVALSFIPYLASYWFMNPIRLIPITVTGLIVSMTYLVLIGDSVRRLRPLILVWI LSEATGLLVVLMSGGGLSPVALLNVTLLSTLILVALTGFVVSLALLRLSEVKYILNVMGLGTLGDSLVLSLRYLLNASVA MDEAYMVLKSLGSVKPRLLVNSLVANGVRYSIILAQYIEYYGIPSVKPRVTLSRLDSIALIPLTLYLILLAL
Sequences:
>Translated_232_residues MFYEWVKPVVKGAEGSLGGLSIIGKITVALSFIPYLASYWFMNPIRLIPITVTGLIVSMTYLVLIGDSVRRLRPLILVWI LSEATGLLVVLMSGGGLSPVALLNVTLLSTLILVALTGFVVSLALLRLSEVKYILNVMGLGTLGDSLVLSLRYLLNASVA MDEAYMVLKSLGSVKPRLLVNSLVANGVRYSIILAQYIEYYGIPSVKPRVTLSRLDSIALIPLTLYLILLAL >Mature_232_residues MFYEWVKPVVKGAEGSLGGLSIIGKITVALSFIPYLASYWFMNPIRLIPITVTGLIVSMTYLVLIGDSVRRLRPLILVWI LSEATGLLVVLMSGGGLSPVALLNVTLLSTLILVALTGFVVSLALLRLSEVKYILNVMGLGTLGDSLVLSLRYLLNASVA MDEAYMVLKSLGSVKPRLLVNSLVANGVRYSIILAQYIEYYGIPSVKPRVTLSRLDSIALIPLTLYLILLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25168; Mature: 25168
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYEWVKPVVKGAEGSLGGLSIIGKITVALSFIPYLASYWFMNPIRLIPITVTGLIVSMT CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YLVLIGDSVRRLRPLILVWILSEATGLLVVLMSGGGLSPVALLNVTLLSTLILVALTGFV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH VSLALLRLSEVKYILNVMGLGTLGDSLVLSLRYLLNASVAMDEAYMVLKSLGSVKPRLLV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH NSLVANGVRYSIILAQYIEYYGIPSVKPRVTLSRLDSIALIPLTLYLILLAL HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC >Mature Secondary Structure MFYEWVKPVVKGAEGSLGGLSIIGKITVALSFIPYLASYWFMNPIRLIPITVTGLIVSMT CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YLVLIGDSVRRLRPLILVWILSEATGLLVVLMSGGGLSPVALLNVTLLSTLILVALTGFV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH VSLALLRLSEVKYILNVMGLGTLGDSLVLSLRYLLNASVAMDEAYMVLKSLGSVKPRLLV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH NSLVANGVRYSIILAQYIEYYGIPSVKPRVTLSRLDSIALIPLTLYLILLAL HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA