| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is ywrD [H]
Identifier: 159041836
GI number: 159041836
Start: 1339056
End: 1340561
Strand: Reverse
Name: ywrD [H]
Synonym: Cmaq_1271
Alternate gene names: 159041836
Gene position: 1340561-1339056 (Counterclockwise)
Preceding gene: 159041837
Following gene: 159041835
Centisome position: 64.53
GC content: 44.69
Gene sequence:
>1506_bases ATGTCTTCCTTCAGTAAAACACCATGGGTTAGTAAACTTGGTGGCGTCGCCTCAGAACACCCAGTATCCAGTGGTGTTGG TGTTAATGTGCTTAAACTTGGTGGTAACGCCGTTGATGCAGCCGTGGCTGTATCACTGGCATTAGCTGTAACTCAACCAC ACCTGGGTGGCTTAGGTTCAGACCTAGTTGCCTTAATATACAATGGTGATGAGGTTAAGGTCCTTAACGCCACTGGATGG GCTCCAGCCAAGTTAACTAGGGGGTTACTTGAATCAAGGGGTTTAAGTAAAGTCCCATTGAGAGGACCCTTATCTCCAGT GGTTCCGGGGATGCTGGCTGGGTTATACACCATGTGGAGGGAAATGGGTACGTTGGAGTGGCGTAGCATAGTTAACACTG TGATTGAGGCTGTTAAGGATGGTTTCCCAGCAGGGTTAAGCCTAGTGAGGGCTATTAGAAGCGTTATCAGTAATGAATTA ATCGACGACGCCTTTAAATCAACCTACCCGATTAATGCTGAACCATGGAGCGTGGTTAAGATTAGTAAGCTTACCAAGGC CCTTGAGTTGATAGCTGAACATGGGGCTGATTCAATGTATAATGGTGAATTAGGTGAATCCCTGGTTAAGAGGGTTAATG AACTGGGTGGTGTATTGGATTTAAGTGATTTAAGGGATTATAGACCTGAGTGGGTTAATCCAGTAAGCATAGAGTACAGG GGATTCATTATTAATGAGGCTCCACCCAATACTCAAGGCTTAACCACACTCATGATACTTAAGCTACTTGAGGATGAGGA TATGCCTAAGGATCCATTTTCAAGTGAGAGAATTAGGCAATTCCTTAACGCCTATAGGATAGCGTATAAGGCGCGGGATG AATTCATAGGTGACCCAAGGTTCACTAATATCCCCATTAATACACTGCTTGACGTAGGCTTCCTAAGGAGCCTAGGCCAA GGCAAGTCACCTAGTGGTGTTGGTGACACAACATACTTCATCACTGCTGATAATCATGGTAATGTTGTAAGCTGCATACA AAGCCTATACCACCACTTTGGTTCCCTTGTCACAGATCCCGAATACGGTGTAACATTGAATAATAGGGCCTCGGACTTCG CGTTAAGTGGCCCTAATGCGCTTGAGCCTAGGAAGAGGCCGTTGCATACATTATCCTCGGTGATGATTCTTAAAAACGGT GAATTAAAATACACCCTAGGTACCTCTGGTGCTCACTTTAGGCCGCAGCAGCATGCCTTAATGATAACTAACATTATTGA TTACGGGATGAATCCAGTGGATGCTGTTAATGCTCCGAGATTCCTATGGAACAGTGATGAACTCATAATTGAGGATGATT ACGAAACCTCTGGGGTTAATGAGAAGTTCAGGTTAATTAAGTACCCCGGTAGTACTGGTGTTGCCAGTGTACTGGCTATG CTTGATAATGGCTTTAAACTACTTTACTCAGATATAAGGGGTGATGGGTTAGCCCTAGGTCTTTGA
Upstream 100 bases:
>100_bases TAGCATTAGCCGTAATAGGTCCTGGTGCATTATCAATAGATCACCTAATACTGGCCTACGCGTAGTATTATTTAAACCCC CTTAACTGGTATTAAAAATA
Downstream 100 bases:
>100_bases ACAGGGAGGCTAGTTTTTATAAAAGGTGGATTACTGAGGCTTCTTCATGTCGCTGAGGGTTATTGAGGTTAATGGTTACC CAATAATGGTGTTTGAATGG
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSSFSKTPWVSKLGGVASEHPVSSGVGVNVLKLGGNAVDAAVAVSLALAVTQPHLGGLGSDLVALIYNGDEVKVLNATGW APAKLTRGLLESRGLSKVPLRGPLSPVVPGMLAGLYTMWREMGTLEWRSIVNTVIEAVKDGFPAGLSLVRAIRSVISNEL IDDAFKSTYPINAEPWSVVKISKLTKALELIAEHGADSMYNGELGESLVKRVNELGGVLDLSDLRDYRPEWVNPVSIEYR GFIINEAPPNTQGLTTLMILKLLEDEDMPKDPFSSERIRQFLNAYRIAYKARDEFIGDPRFTNIPINTLLDVGFLRSLGQ GKSPSGVGDTTYFITADNHGNVVSCIQSLYHHFGSLVTDPEYGVTLNNRASDFALSGPNALEPRKRPLHTLSSVMILKNG ELKYTLGTSGAHFRPQQHALMITNIIDYGMNPVDAVNAPRFLWNSDELIIEDDYETSGVNEKFRLIKYPGSTGVASVLAM LDNGFKLLYSDIRGDGLALGL
Sequences:
>Translated_501_residues MSSFSKTPWVSKLGGVASEHPVSSGVGVNVLKLGGNAVDAAVAVSLALAVTQPHLGGLGSDLVALIYNGDEVKVLNATGW APAKLTRGLLESRGLSKVPLRGPLSPVVPGMLAGLYTMWREMGTLEWRSIVNTVIEAVKDGFPAGLSLVRAIRSVISNEL IDDAFKSTYPINAEPWSVVKISKLTKALELIAEHGADSMYNGELGESLVKRVNELGGVLDLSDLRDYRPEWVNPVSIEYR GFIINEAPPNTQGLTTLMILKLLEDEDMPKDPFSSERIRQFLNAYRIAYKARDEFIGDPRFTNIPINTLLDVGFLRSLGQ GKSPSGVGDTTYFITADNHGNVVSCIQSLYHHFGSLVTDPEYGVTLNNRASDFALSGPNALEPRKRPLHTLSSVMILKNG ELKYTLGTSGAHFRPQQHALMITNIIDYGMNPVDAVNAPRFLWNSDELIIEDDYETSGVNEKFRLIKYPGSTGVASVLAM LDNGFKLLYSDIRGDGLALGL >Mature_500_residues SSFSKTPWVSKLGGVASEHPVSSGVGVNVLKLGGNAVDAAVAVSLALAVTQPHLGGLGSDLVALIYNGDEVKVLNATGWA PAKLTRGLLESRGLSKVPLRGPLSPVVPGMLAGLYTMWREMGTLEWRSIVNTVIEAVKDGFPAGLSLVRAIRSVISNELI DDAFKSTYPINAEPWSVVKISKLTKALELIAEHGADSMYNGELGESLVKRVNELGGVLDLSDLRDYRPEWVNPVSIEYRG FIINEAPPNTQGLTTLMILKLLEDEDMPKDPFSSERIRQFLNAYRIAYKARDEFIGDPRFTNIPINTLLDVGFLRSLGQG KSPSGVGDTTYFITADNHGNVVSCIQSLYHHFGSLVTDPEYGVTLNNRASDFALSGPNALEPRKRPLHTLSSVMILKNGE LKYTLGTSGAHFRPQQHALMITNIIDYGMNPVDAVNAPRFLWNSDELIIEDDYETSGVNEKFRLIKYPGSTGVASVLAML DNGFKLLYSDIRGDGLALGL
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=484, Percent_Identity=26.2396694214876, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI73915090, Length=484, Percent_Identity=26.2396694214876, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI73915096, Length=484, Percent_Identity=26.2396694214876, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI73915094, Length=484, Percent_Identity=26.2396694214876, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI113429326, Length=489, Percent_Identity=25.3578732106339, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI113429324, Length=484, Percent_Identity=25.4132231404959, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI153266901, Length=546, Percent_Identity=24.3589743589744, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI153266885, Length=545, Percent_Identity=23.6697247706422, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI109148539, Length=449, Percent_Identity=24.7216035634744, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI153266907, Length=542, Percent_Identity=22.140221402214, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1789856, Length=488, Percent_Identity=32.5819672131148, Blast_Score=219, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17506189, Length=460, Percent_Identity=25.8695652173913, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193208247, Length=486, Percent_Identity=24.0740740740741, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI193208245, Length=486, Percent_Identity=24.0740740740741, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI212646519, Length=529, Percent_Identity=23.2514177693762, Blast_Score=112, Evalue=6e-25, Organism=Caenorhabditis elegans, GI72000294, Length=529, Percent_Identity=23.2514177693762, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17542894, Length=460, Percent_Identity=23.4782608695652, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17564448, Length=395, Percent_Identity=25.0632911392405, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323330, Length=500, Percent_Identity=24.6, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642670, Length=496, Percent_Identity=24.7983870967742, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24642666, Length=496, Percent_Identity=24.7983870967742, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI161077878, Length=496, Percent_Identity=24.7983870967742, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI161077880, Length=496, Percent_Identity=24.7983870967742, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI45551474, Length=496, Percent_Identity=24.7983870967742, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI18859893, Length=442, Percent_Identity=27.6018099547511, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI161077496, Length=446, Percent_Identity=25.3363228699552, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI18859741, Length=440, Percent_Identity=22.5, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 54459; Mature: 54328
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFSKTPWVSKLGGVASEHPVSSGVGVNVLKLGGNAVDAAVAVSLALAVTQPHLGGLGS CCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCC DLVALIYNGDEVKVLNATGWAPAKLTRGLLESRGLSKVPLRGPLSPVVPGMLAGLYTMWR CEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH EMGTLEWRSIVNTVIEAVKDGFPAGLSLVRAIRSVISNELIDDAFKSTYPINAEPWSVVK HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH ISKLTKALELIAEHGADSMYNGELGESLVKRVNELGGVLDLSDLRDYRPEWVNPVSIEYR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHCCCCCCCCEEEEEE GFIINEAPPNTQGLTTLMILKLLEDEDMPKDPFSSERIRQFLNAYRIAYKARDEFIGDPR EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC FTNIPINTLLDVGFLRSLGQGKSPSGVGDTTYFITADNHGNVVSCIQSLYHHFGSLVTDP CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC EYGVTLNNRASDFALSGPNALEPRKRPLHTLSSVMILKNGELKYTLGTSGAHFRPQQHAL CCCEEECCCCCCCEECCCCCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCCCHH MITNIIDYGMNPVDAVNAPRFLWNSDELIIEDDYETSGVNEKFRLIKYPGSTGVASVLAM HHHHHHHHCCCCHHHCCCCCEEECCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHH LDNGFKLLYSDIRGDGLALGL HHCCHHHHHHHHCCCCEEECC >Mature Secondary Structure SSFSKTPWVSKLGGVASEHPVSSGVGVNVLKLGGNAVDAAVAVSLALAVTQPHLGGLGS CCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCC DLVALIYNGDEVKVLNATGWAPAKLTRGLLESRGLSKVPLRGPLSPVVPGMLAGLYTMWR CEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH EMGTLEWRSIVNTVIEAVKDGFPAGLSLVRAIRSVISNELIDDAFKSTYPINAEPWSVVK HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH ISKLTKALELIAEHGADSMYNGELGESLVKRVNELGGVLDLSDLRDYRPEWVNPVSIEYR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHCCCCCCCCEEEEEE GFIINEAPPNTQGLTTLMILKLLEDEDMPKDPFSSERIRQFLNAYRIAYKARDEFIGDPR EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC FTNIPINTLLDVGFLRSLGQGKSPSGVGDTTYFITADNHGNVVSCIQSLYHHFGSLVTDP CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC EYGVTLNNRASDFALSGPNALEPRKRPLHTLSSVMILKNGELKYTLGTSGAHFRPQQHAL CCCEEECCCCCCCEECCCCCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCCCHH MITNIIDYGMNPVDAVNAPRFLWNSDELIIEDDYETSGVNEKFRLIKYPGSTGVASVLAM HHHHHHHHCCCCHHHCCCCCEEECCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHH LDNGFKLLYSDIRGDGLALGL HHCCHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]