| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041602
Identifier: 159041602
GI number: 159041602
Start: 1086633
End: 1087742
Strand: Reverse
Name: 159041602
Synonym: Cmaq_1035
Alternate gene names: NA
Gene position: 1087742-1086633 (Counterclockwise)
Preceding gene: 159041604
Following gene: 159041595
Centisome position: 52.36
GC content: 46.76
Gene sequence:
>1110_bases ATGGGGTTGATTACCGTAGTGGGTTTGGGTCCAATGGGTAGGGCTGCCTCATACTACTTGATTAAGCACACTAATCATGA GGTATTGGGTTACGATAAATCCAGTGAGGCGGTTAATGCTGCATTAAGCCTGGGGATTAATGCCGTTAAGGCTGATGCCA TGAATGATGAGGTCGCCAGGAGGATTGCCGGTGATTCTGATGTAGTATTAACCGCTGTGCCACAGTCCATTGCCGATTCA CTGGTTTTTAAGCTTCATGAATATGGGGCTAAGGTTATTGATTTAATATTCCTATGGAGGTTTAATAGTGAAACCGCTGG GAGGGTTAGTAATGGATCCCTTGTAATACCGGCCTGCGGTTGGGCTCCAGGCTTAACCAACCTACTTGCAGCTGCAGCAT CCTCAGAGTTGGATGCTGTTGAGGAGTTGGGGATTCATGTTGGTGGTAATCCAGTGAACCCAAGGCCACCACTGTACTAT GATGTGTTATTCTCCGTTGAAAGCACCATTGAGGAGTACGTGAGGCCGGCCACAATTATGATTAACGGTGAGTTAAAGAG TGTTGACCCATTATCATCAATATACCCGTTTAGGACCTGGCTCATTGACGGTGACTTCTCTGAATTCTACACCGACGGTT TATCAACACTAATCGTCACCATGCCTAGGCGGTTTAAGTCAATTAAAACAATGTATGAGAGAACCATTAGGTGGAGTAGG CACCTTGAGGTTATGAGGATTCTTAAGGATGTTGGCTTACTGGGTAGTGAGGCATTGGTTAAATCCTTAAGCAGCATAAT GAGGCAGGGTGTTGAGGATTTCTCACTAACTGTGGTGGAGGCTAGGGGTGTGATTAATGGTGAGCCTGCCAGGGTTGCCT TTGAGGGTATTGATTACGCAAGGGGTGGCTTCACGTCAATGGCTAGGTTAACTGGGTTCACAGCAGCCGTGGTAGCTGAC TTAGTGGCAAGGGGTGTGATTAAGGGTAGTGGCTTGCTCCCAATTGAGGAGGCTTATTTTGAGAATAAGGATGTATTGAG GCATGTTCTCAATGGACTTAAGGCTGAGGGCGTGAAGCTTATGCTCACTAAAACAGTAACCGCACCCTAG
Upstream 100 bases:
>100_bases GTATTTTTAATAGTCCTGATGGGTATTAAAGTACACTGCCTTATGGTGGTTAATGTAGGAATACTTTAGATACCTATTGA GTTAAGGCTAGGTGGTAATT
Downstream 100 bases:
>100_bases CTTAAACCTTACCTCAACCCTTGAGAAGTAGGGTATTATGAATTTGCCATTAGGTTCACTTGGTTTAAATAGGGATTCTT TTCCTTAAGCCTGAAGGCAT
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Saccharopine Reductase; L-Lysine Dehydrogenase; Dehydrogenase; Saccharopine Dehydrogenase Conjectural; Saccharopine Dehydrogenase-Like Protein; Saccharopine Dehydrogenase Family Protein; Dehydrogenase Protein; Amino Acid Dehydrogenase
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MGLITVVGLGPMGRAASYYLIKHTNHEVLGYDKSSEAVNAALSLGINAVKADAMNDEVARRIAGDSDVVLTAVPQSIADS LVFKLHEYGAKVIDLIFLWRFNSETAGRVSNGSLVIPACGWAPGLTNLLAAAASSELDAVEELGIHVGGNPVNPRPPLYY DVLFSVESTIEEYVRPATIMINGELKSVDPLSSIYPFRTWLIDGDFSEFYTDGLSTLIVTMPRRFKSIKTMYERTIRWSR HLEVMRILKDVGLLGSEALVKSLSSIMRQGVEDFSLTVVEARGVINGEPARVAFEGIDYARGGFTSMARLTGFTAAVVAD LVARGVIKGSGLLPIEEAYFENKDVLRHVLNGLKAEGVKLMLTKTVTAP
Sequences:
>Translated_369_residues MGLITVVGLGPMGRAASYYLIKHTNHEVLGYDKSSEAVNAALSLGINAVKADAMNDEVARRIAGDSDVVLTAVPQSIADS LVFKLHEYGAKVIDLIFLWRFNSETAGRVSNGSLVIPACGWAPGLTNLLAAAASSELDAVEELGIHVGGNPVNPRPPLYY DVLFSVESTIEEYVRPATIMINGELKSVDPLSSIYPFRTWLIDGDFSEFYTDGLSTLIVTMPRRFKSIKTMYERTIRWSR HLEVMRILKDVGLLGSEALVKSLSSIMRQGVEDFSLTVVEARGVINGEPARVAFEGIDYARGGFTSMARLTGFTAAVVAD LVARGVIKGSGLLPIEEAYFENKDVLRHVLNGLKAEGVKLMLTKTVTAP >Mature_368_residues GLITVVGLGPMGRAASYYLIKHTNHEVLGYDKSSEAVNAALSLGINAVKADAMNDEVARRIAGDSDVVLTAVPQSIADSL VFKLHEYGAKVIDLIFLWRFNSETAGRVSNGSLVIPACGWAPGLTNLLAAAASSELDAVEELGIHVGGNPVNPRPPLYYD VLFSVESTIEEYVRPATIMINGELKSVDPLSSIYPFRTWLIDGDFSEFYTDGLSTLIVTMPRRFKSIKTMYERTIRWSRH LEVMRILKDVGLLGSEALVKSLSSIMRQGVEDFSLTVVEARGVINGEPARVAFEGIDYARGGFTSMARLTGFTAAVVADL VARGVIKGSGLLPIEEAYFENKDVLRHVLNGLKAEGVKLMLTKTVTAP
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40013; Mature: 39881
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLITVVGLGPMGRAASYYLIKHTNHEVLGYDKSSEAVNAALSLGINAVKADAMNDEVAR CCEEEEEECCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHCCHHHHHCCCCHHHHH RIAGDSDVVLTAVPQSIADSLVFKLHEYGAKVIDLIFLWRFNSETAGRVSNGSLVIPACG HHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCCCEEEEECC WAPGLTNLLAAAASSELDAVEELGIHVGGNPVNPRPPLYYDVLFSVESTIEEYVRPATIM CCCCHHHHHHHHHCHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE INGELKSVDPLSSIYPFRTWLIDGDFSEFYTDGLSTLIVTMPRRFKSIKTMYERTIRWSR EECCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLEVMRILKDVGLLGSEALVKSLSSIMRQGVEDFSLTVVEARGVINGEPARVAFEGIDYA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCEEEECCCCCC RGGFTSMARLTGFTAAVVADLVARGVIKGSGLLPIEEAYFENKDVLRHVLNGLKAEGVKL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEE MLTKTVTAP EEEECCCCC >Mature Secondary Structure GLITVVGLGPMGRAASYYLIKHTNHEVLGYDKSSEAVNAALSLGINAVKADAMNDEVAR CEEEEEECCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHCCHHHHHCCCCHHHHH RIAGDSDVVLTAVPQSIADSLVFKLHEYGAKVIDLIFLWRFNSETAGRVSNGSLVIPACG HHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCCCEEEEECC WAPGLTNLLAAAASSELDAVEELGIHVGGNPVNPRPPLYYDVLFSVESTIEEYVRPATIM CCCCHHHHHHHHHCHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE INGELKSVDPLSSIYPFRTWLIDGDFSEFYTDGLSTLIVTMPRRFKSIKTMYERTIRWSR EECCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLEVMRILKDVGLLGSEALVKSLSSIMRQGVEDFSLTVVEARGVINGEPARVAFEGIDYA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCEEEECCCCCC RGGFTSMARLTGFTAAVVADLVARGVIKGSGLLPIEEAYFENKDVLRHVLNGLKAEGVKL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEE MLTKTVTAP EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA