| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041576
Identifier: 159041576
GI number: 159041576
Start: 1058695
End: 1059207
Strand: Reverse
Name: 159041576
Synonym: Cmaq_1007
Alternate gene names: NA
Gene position: 1059207-1058695 (Counterclockwise)
Preceding gene: 159041578
Following gene: 159041575
Centisome position: 50.98
GC content: 42.5
Gene sequence:
>513_bases ATGTCTGAGGAGGTTAAGCCCATTTACGCTAAGGGTTTCTTCACAATGGATCTCAACGGCACTGTTAGGCAGTACACTGT TTTCTACTACACCGACCCTAAGCACTACTACGCTAATTTAACTAAGGAGGGGTATAGGAGGGAGTTAAGCCTACTGAGGC GTAATATGCAGCGTTTCCTTGATGAGGAGGTTATTAGGATGAATGGTGTTAGGGTTAAGGCTAAGGTAATTCACGTTAAC ATTGGGCTATTAACAGTTAACCTACCCTTCATTGAATTCCTAATAACGTTTAAAGGATCCCTAAGGAGTGGTGTCAACAC TTATGAGGATGAGTATGAGGAGGAGGTCACTGAGTATCCCTATGACATAGTGTGGTGGCTTCCTGGTAATGTTACTGAAG TATCCATGGCTGGTGAAGTTAACGTTAAGGATAATATCATTACCGTGAGGGTTAATGAGGGTGTTAAAGTTGGCGGCAGG GAGACGATAAGCTTCATCATTGATAATACTTAA
Upstream 100 bases:
>100_bases CCCTTGCCTGAGGCTTACTAATCAAAGTTACAGTGACCACTGATTAGAGTAACTGCTGTTAGCTAAAAAGCTTAATAATC ATGTTATTTTAACTGACGTA
Downstream 100 bases:
>100_bases ATAATTTACTAGTATTATATTATCTTAAATATGGTAACGATAGCCTTATATATGACTAAGGGAGTACTAAACCATGGTCA TAGCACTATACTGCACAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSEEVKPIYAKGFFTMDLNGTVRQYTVFYYTDPKHYYANLTKEGYRRELSLLRRNMQRFLDEEVIRMNGVRVKAKVIHVN IGLLTVNLPFIEFLITFKGSLRSGVNTYEDEYEEEVTEYPYDIVWWLPGNVTEVSMAGEVNVKDNIITVRVNEGVKVGGR ETISFIIDNT
Sequences:
>Translated_170_residues MSEEVKPIYAKGFFTMDLNGTVRQYTVFYYTDPKHYYANLTKEGYRRELSLLRRNMQRFLDEEVIRMNGVRVKAKVIHVN IGLLTVNLPFIEFLITFKGSLRSGVNTYEDEYEEEVTEYPYDIVWWLPGNVTEVSMAGEVNVKDNIITVRVNEGVKVGGR ETISFIIDNT >Mature_169_residues SEEVKPIYAKGFFTMDLNGTVRQYTVFYYTDPKHYYANLTKEGYRRELSLLRRNMQRFLDEEVIRMNGVRVKAKVIHVNI GLLTVNLPFIEFLITFKGSLRSGVNTYEDEYEEEVTEYPYDIVWWLPGNVTEVSMAGEVNVKDNIITVRVNEGVKVGGRE TISFIIDNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19781; Mature: 19650
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEVKPIYAKGFFTMDLNGTVRQYTVFYYTDPKHYYANLTKEGYRRELSLLRRNMQRFL CCCCCCEEEECEEEEEECCCCEEEEEEEEEECCHHEEECCCHHHHHHHHHHHHHHHHHHH DEEVIRMNGVRVKAKVIHVNIGLLTVNLPFIEFLITFKGSLRSGVNTYEDEYEEEVTEYP HHHHHHHCCEEEEEEEEEEEEEEEEEEHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCC YDIVWWLPGNVTEVSMAGEVNVKDNIITVRVNEGVKVGGRETISFIIDNT CEEEEECCCCEEEEEECCCEEECCCEEEEEECCCEEECCCEEEEEEEECC >Mature Secondary Structure SEEVKPIYAKGFFTMDLNGTVRQYTVFYYTDPKHYYANLTKEGYRRELSLLRRNMQRFL CCCCCEEEECEEEEEECCCCEEEEEEEEEECCHHEEECCCHHHHHHHHHHHHHHHHHHH DEEVIRMNGVRVKAKVIHVNIGLLTVNLPFIEFLITFKGSLRSGVNTYEDEYEEEVTEYP HHHHHHHCCEEEEEEEEEEEEEEEEEEHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCC YDIVWWLPGNVTEVSMAGEVNVKDNIITVRVNEGVKVGGRETISFIIDNT CEEEEECCCCEEEEEECCCEEECCCEEEEEECCCEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA