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The map label for this gene is 159041574

Identifier: 159041574

GI number: 159041574

Start: 1058015

End: 1058359

Strand: Reverse

Name: 159041574

Synonym: Cmaq_1005

Alternate gene names: NA

Gene position: 1058359-1058015 (Counterclockwise)

Preceding gene: 159041575

Following gene: 159041573

Centisome position: 50.94

GC content: 41.45

Gene sequence:

>345_bases
ATGCCCCTTTACAGGTTAAGTAATATTAAGGGGGAAGAGGTTAACGCATTAACAACCAGGAGGTACATTAATGGTGAAAG
AATGACCCTTGCACAATTCATGTTTAAGAAAGGCGCCAAGGTTAAGAGGCATGCACACATTAATGAGCAATTCTCAATAA
TATTAACAGGCAGGTTAAGGTTTAGGATAAATAATGAGGAGTACATTGCTGAAGCCGGAGACGTGGTTCACGTACCCTCA
AATATGGAGCATGAGGTTGAGGCACTGGAGGATTCAATAGTAGTGGATGTATACAGTCCAATTAGGGAGGATTGGCTTAA
GGGGGAGGATAAATACTTAAGGTGA

Upstream 100 bases:

>100_bases
TACAGTATTGGGGATAGGGTGAGTAGGGGAATGGAGATTACACTTAACGCAACCAACCTATAGGATACAATACTTATAAC
CCAGTACTGAACCCGCAATT

Downstream 100 bases:

>100_bases
AGTTTAGTCTTTACGCGAATCCCAAGGGAAGTCAATAATCTTAGCATATTATACTATAGCCCAATTAGTGGAGATGCATT
ACCTCTAATACTATACTTAA

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Pectin Degradation Protein KdgF; Cupin Domain Protein; Cupin 2 Conserved Barrel Domain Protein; Degradation Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPLYRLSNIKGEEVNALTTRRYINGERMTLAQFMFKKGAKVKRHAHINEQFSIILTGRLRFRINNEEYIAEAGDVVHVPS
NMEHEVEALEDSIVVDVYSPIREDWLKGEDKYLR

Sequences:

>Translated_114_residues
MPLYRLSNIKGEEVNALTTRRYINGERMTLAQFMFKKGAKVKRHAHINEQFSIILTGRLRFRINNEEYIAEAGDVVHVPS
NMEHEVEALEDSIVVDVYSPIREDWLKGEDKYLR
>Mature_113_residues
PLYRLSNIKGEEVNALTTRRYINGERMTLAQFMFKKGAKVKRHAHINEQFSIILTGRLRFRINNEEYIAEAGDVVHVPSN
MEHEVEALEDSIVVDVYSPIREDWLKGEDKYLR

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13350; Mature: 13219

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYRLSNIKGEEVNALTTRRYINGERMTLAQFMFKKGAKVKRHAHINEQFSIILTGRLR
CCCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHHHCCCCCEECCCCCCCEEEEEEEEEE
FRINNEEYIAEAGDVVHVPSNMEHEVEALEDSIVVDVYSPIREDWLKGEDKYLR
EEECCHHEEECCCCEEECCCCCCHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PLYRLSNIKGEEVNALTTRRYINGERMTLAQFMFKKGAKVKRHAHINEQFSIILTGRLR
CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHHHCCCCCEECCCCCCCEEEEEEEEEE
FRINNEEYIAEAGDVVHVPSNMEHEVEALEDSIVVDVYSPIREDWLKGEDKYLR
EEECCHHEEECCCCEEECCCCCCHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA