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The map label for this gene is rpl29p [H]

Identifier: 159041516

GI number: 159041516

Start: 992804

End: 993151

Strand: Reverse

Name: rpl29p [H]

Synonym: Cmaq_0946

Alternate gene names: 159041516

Gene position: 993151-992804 (Counterclockwise)

Preceding gene: 159041517

Following gene: 159041515

Centisome position: 47.8

GC content: 39.08

Gene sequence:

>348_bases
ATGCCGGAGAAGGTTAAGTTGAGGGATCTTAAGAACATGAGTAGAGAGGATAGGTTAAGGCTACTTAATGAGCTTAGGAG
CGAATTAATAAGGCTAGAGACCCAAAGAGGTAGGGGTGTTGTTGATAATCCAGGGAGAATGAGGTACGTTAGGAGACTAA
TAGCTAGAATACTTACAATTGAGCATGAGACTGAGTTGAATGATTTAAGAAATAGGATAAATGAATTGGTTAAGAAGGGG
GTATCGTATGATAAGGTTTCAATGCAATTGGGTATTAAAAAATCAACCTTAAGAAGGATACTGAGGGTCACGAAACCCAG
TACCTCTACTAAACCTACCCAGCAATAA

Upstream 100 bases:

>100_bases
GCATTAACTTGAATCTAGGTAAGAGGAAGTAGGATAAGAGGTAATTCCTAGGATTCTTCCCTAGACTAAGCTTAAAAACA
CTTAACCCCGTAACCCCCTA

Downstream 100 bases:

>100_bases
ATATAAACTAGGGTTCTTTATTCTATCTGGTGAATTATATATCACAAGGGTTAATGAGGTCTACGAACTCAGTAGGGAGG
CTTTAACCCTCATTAAGGAT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MPEKVKLRDLKNMSREDRLRLLNELRSELIRLETQRGRGVVDNPGRMRYVRRLIARILTIEHETELNDLRNRINELVKKG
VSYDKVSMQLGIKKSTLRRILRVTKPSTSTKPTQQ

Sequences:

>Translated_115_residues
MPEKVKLRDLKNMSREDRLRLLNELRSELIRLETQRGRGVVDNPGRMRYVRRLIARILTIEHETELNDLRNRINELVKKG
VSYDKVSMQLGIKKSTLRRILRVTKPSTSTKPTQQ
>Mature_114_residues
PEKVKLRDLKNMSREDRLRLLNELRSELIRLETQRGRGVVDNPGRMRYVRRLIARILTIEHETELNDLRNRINELVKKGV
SYDKVSMQLGIKKSTLRRILRVTKPSTSTKPTQQ

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 13593; Mature: 13462

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKVKLRDLKNMSREDRLRLLNELRSELIRLETQRGRGVVDNPGRMRYVRRLIARILTI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
EHETELNDLRNRINELVKKGVSYDKVSMQLGIKKSTLRRILRVTKPSTSTKPTQQ
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PEKVKLRDLKNMSREDRLRLLNELRSELIRLETQRGRGVVDNPGRMRYVRRLIARILTI
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
EHETELNDLRNRINELVKKGVSYDKVSMQLGIKKSTLRRILRVTKPSTSTKPTQQ
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792869 [H]