| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is 159041477
Identifier: 159041477
GI number: 159041477
Start: 949735
End: 950628
Strand: Reverse
Name: 159041477
Synonym: Cmaq_0906
Alternate gene names: NA
Gene position: 950628-949735 (Counterclockwise)
Preceding gene: 159041478
Following gene: 159041475
Centisome position: 45.76
GC content: 41.16
Gene sequence:
>894_bases GTGGGTGTTAAGGTTGCGTTAATTGGAATGGGTAGGATGGGTTCAATCCACCTTAAGGAATTAGTTAGGTTAAGGAATGA GGGGTTAATTGACAGTATTACTGTTATTGATATTGATGATTCAAGGCTCAATGCCGCTAAATCCATGGGGGTTGATGAAA CTTTTAAAAGTATTGATGAAGCCTTAACTAAGCATCATGAGGCAATAATAATAGCAACACCAACAACCACTCACTATGAC TTATCAATTAAGCTCGTGGGTAAGGCTCACTTAATGGTTGAGAAGCCTGTAACAGTGAAGTTGAGTGAGGCCCTTAACCT ACTTAGTGAATCAAGGAAAACCGGCAACATGGTGATTCCTGCAATGGTTGAGAGATTTAATGAGACTGCTGAAGAGGCGT TCAGCATGGTTAAGGAACCAATCGCCTTATCAATGGTTAGGATCGGTACCATGCCGCAGAACCCTGACTCATACATTGGG GTTATGTATGATTTAGCAATCCATGACCTAGACCTAGCATTATTTAGGTTAAGACCCATGAAGGCTATAGTGGTTAAGTC AATGCTTAATAGGGATAACGTAAGCCTACTCCTTAACCTAGATGGGGTCTCAGTGAATATTGAGGCTAAGTGGGTTAAGT CAGGTAAACTACGTGTGCATACGTACGTTGGGTTAAGTACATTCACGGTAGCTGACTTAATGCATGGGTTAATTTACGGT AATGGGGAGGTTAAGAAGGTGAATCAAAGTGAAGAACCTGTTTATCTAGAGGATAGGAATTTCCTTGAGGCGGTTATGGG GAAGACTAAACCCTTCGCGACCTTAACCGACTACATATCATGCCTAAGGATAATTGAGGCCATTCAACAAAATTATAATG CAGTACCATTATAG
Upstream 100 bases:
>100_bases GAGGAGGGCAGTGAGAGTAAGGAGGGTAGTGAATCACCTGGCCAAGCCCAGCAATAATGCTTATAATTACTCATTATTAA TCCCTCAACGGTGTTATTAA
Downstream 100 bases:
>100_bases GGGCCGTTATCTCATACCTAAATATTGTACTGAATCTTCACCAATAATGGGGGGTTTAATCGAACTCATTAATATTGCTT GCACTTACTTCGGCTTGATT
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase Domain Protein; Dehydrogenase; Oxidoreductase Gfo/Idh/MocA Family; Oxidoreductase-Like; NADH-Dependent Dehydrogenase Family Protein; Oxidoreductase GFO/IDH/MOCA Family; Gfo/Idh/MocA Family Oxidoreductase; NAD(P)-Dependent Oxidoreductase; Myo-Inositol 2-Dehydrogenase; Oxidoreductase Family Protein; Dehydrogenase-Related Protein; 3-Chlorobenzoate-3 4-Dioxygenase Dyhydrogenase; NAD/P Oxidoreductase
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDEALTKHHEAIIIATPTTTHYD LSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIPAMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIG VMYDLAIHDLDLALFRLRPMKAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL
Sequences:
>Translated_297_residues MGVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDEALTKHHEAIIIATPTTTHYD LSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIPAMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIG VMYDLAIHDLDLALFRLRPMKAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL >Mature_296_residues GVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDEALTKHHEAIIIATPTTTHYDL SIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIPAMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIGV MYDLAIHDLDLALFRLRPMKAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYGN GEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32983; Mature: 32852
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDE CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHH ALTKHHEAIIIATPTTTHYDLSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIP HHHHCCCEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCEEHH AMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIGVMYDLAIHDLDLALFRLRPM HHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHH KAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG HHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHEEC NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL CCCEEECCCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDE CEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHH ALTKHHEAIIIATPTTTHYDLSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIP HHHHCCCEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCEEHH AMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIGVMYDLAIHDLDLALFRLRPM HHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHH KAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG HHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHEEC NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL CCCEEECCCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA