Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041477

Identifier: 159041477

GI number: 159041477

Start: 949735

End: 950628

Strand: Reverse

Name: 159041477

Synonym: Cmaq_0906

Alternate gene names: NA

Gene position: 950628-949735 (Counterclockwise)

Preceding gene: 159041478

Following gene: 159041475

Centisome position: 45.76

GC content: 41.16

Gene sequence:

>894_bases
GTGGGTGTTAAGGTTGCGTTAATTGGAATGGGTAGGATGGGTTCAATCCACCTTAAGGAATTAGTTAGGTTAAGGAATGA
GGGGTTAATTGACAGTATTACTGTTATTGATATTGATGATTCAAGGCTCAATGCCGCTAAATCCATGGGGGTTGATGAAA
CTTTTAAAAGTATTGATGAAGCCTTAACTAAGCATCATGAGGCAATAATAATAGCAACACCAACAACCACTCACTATGAC
TTATCAATTAAGCTCGTGGGTAAGGCTCACTTAATGGTTGAGAAGCCTGTAACAGTGAAGTTGAGTGAGGCCCTTAACCT
ACTTAGTGAATCAAGGAAAACCGGCAACATGGTGATTCCTGCAATGGTTGAGAGATTTAATGAGACTGCTGAAGAGGCGT
TCAGCATGGTTAAGGAACCAATCGCCTTATCAATGGTTAGGATCGGTACCATGCCGCAGAACCCTGACTCATACATTGGG
GTTATGTATGATTTAGCAATCCATGACCTAGACCTAGCATTATTTAGGTTAAGACCCATGAAGGCTATAGTGGTTAAGTC
AATGCTTAATAGGGATAACGTAAGCCTACTCCTTAACCTAGATGGGGTCTCAGTGAATATTGAGGCTAAGTGGGTTAAGT
CAGGTAAACTACGTGTGCATACGTACGTTGGGTTAAGTACATTCACGGTAGCTGACTTAATGCATGGGTTAATTTACGGT
AATGGGGAGGTTAAGAAGGTGAATCAAAGTGAAGAACCTGTTTATCTAGAGGATAGGAATTTCCTTGAGGCGGTTATGGG
GAAGACTAAACCCTTCGCGACCTTAACCGACTACATATCATGCCTAAGGATAATTGAGGCCATTCAACAAAATTATAATG
CAGTACCATTATAG

Upstream 100 bases:

>100_bases
GAGGAGGGCAGTGAGAGTAAGGAGGGTAGTGAATCACCTGGCCAAGCCCAGCAATAATGCTTATAATTACTCATTATTAA
TCCCTCAACGGTGTTATTAA

Downstream 100 bases:

>100_bases
GGGCCGTTATCTCATACCTAAATATTGTACTGAATCTTCACCAATAATGGGGGGTTTAATCGAACTCATTAATATTGCTT
GCACTTACTTCGGCTTGATT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase Domain Protein; Dehydrogenase; Oxidoreductase Gfo/Idh/MocA Family; Oxidoreductase-Like; NADH-Dependent Dehydrogenase Family Protein; Oxidoreductase GFO/IDH/MOCA Family; Gfo/Idh/MocA Family Oxidoreductase; NAD(P)-Dependent Oxidoreductase; Myo-Inositol 2-Dehydrogenase; Oxidoreductase Family Protein; Dehydrogenase-Related Protein; 3-Chlorobenzoate-3 4-Dioxygenase Dyhydrogenase; NAD/P Oxidoreductase

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MGVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDEALTKHHEAIIIATPTTTHYD
LSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIPAMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIG
VMYDLAIHDLDLALFRLRPMKAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG
NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL

Sequences:

>Translated_297_residues
MGVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDEALTKHHEAIIIATPTTTHYD
LSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIPAMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIG
VMYDLAIHDLDLALFRLRPMKAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG
NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL
>Mature_296_residues
GVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDEALTKHHEAIIIATPTTTHYDL
SIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIPAMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIGV
MYDLAIHDLDLALFRLRPMKAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYGN
GEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32983; Mature: 32852

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDE
CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHH
ALTKHHEAIIIATPTTTHYDLSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIP
HHHHCCCEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCEEHH
AMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIGVMYDLAIHDLDLALFRLRPM
HHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHH
KAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG
HHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHEEC
NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL
CCCEEECCCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GVKVALIGMGRMGSIHLKELVRLRNEGLIDSITVIDIDDSRLNAAKSMGVDETFKSIDE
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHH
ALTKHHEAIIIATPTTTHYDLSIKLVGKAHLMVEKPVTVKLSEALNLLSESRKTGNMVIP
HHHHCCCEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCEEHH
AMVERFNETAEEAFSMVKEPIALSMVRIGTMPQNPDSYIGVMYDLAIHDLDLALFRLRPM
HHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHH
KAIVVKSMLNRDNVSLLLNLDGVSVNIEAKWVKSGKLRVHTYVGLSTFTVADLMHGLIYG
HHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHEEC
NGEVKKVNQSEEPVYLEDRNFLEAVMGKTKPFATLTDYISCLRIIEAIQQNYNAVPL
CCCEEECCCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA