| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041474
Identifier: 159041474
GI number: 159041474
Start: 945078
End: 945857
Strand: Reverse
Name: 159041474
Synonym: Cmaq_0902
Alternate gene names: NA
Gene position: 945857-945078 (Counterclockwise)
Preceding gene: 159041475
Following gene: 159041473
Centisome position: 45.53
GC content: 43.08
Gene sequence:
>780_bases ATGATTGATGCACTATGCATGAGTGGTGCATACCCATTTAGGTACCTTTCAATGAGCACTGAGGCTGTTGCATCAAAATT AGCCTCAGAGGGCTTTAAGCACTGCTTAATGTTTAACCTAACAGCCCTATTTCACAGGGATCCATGGTGGGCTAACGTGG AGTTCGCCAGGGAGGACCCTAAGGTTGACTGTAGCATACATAAGTTAGCCGTCTTCAACCCTGACTACGAGGATAAGTTA AGGATTAGGGAGTACAGTAGAATGGGTTACGTGGGCTTCGTCACTAGTCCAATATACCATGGCTACAGATTAATGAGGAG GAGCGTGATAAGTAACTTAACTGAGGCCTTAAGCCATGGCGCCGTCGTAATCCTTAACCTACTGGAGGATTTAAGGCAAA TGCATAGGGCTTATTCCTTCAGGTATAGAATCATGCTGGGTGAATTAAGTGAGGCCTTGAAGAATATAGTTAATAAGGGG GATGGGGAGGTTAAGGTATTGTTATCCCATTTCCCTTATAATGACCTAGCTGGCTTAAGGTCACTGTACAATGGTGATGT TTACGTGGACTTCGCATCATCACAGGTATTAGGGGCGCCTTACAATCACGTTGAGGAATTAGTTAAGCTATATGGTGCAT CAAGGCTCGTATTATCAACAGGATTCATGATGAAGTACCCTAAGTCATCAATACTTAAGCTTCAATTATCCAAGATTCAG GATAAGGATAAGGAGGCGATATCATCAGTAAACGCAGGTAGGCTTTATGGAATTAAGTAA
Upstream 100 bases:
>100_bases TATCGGCTGCCGTGTCTAGGATAATTAATGCTGATATTAGTGAGGAGTCTAGGATCAAGATACTTAGGTTAAACGCCATG AGGATTCTAGGTGAGTGAGG
Downstream 100 bases:
>100_bases AGCACTAAATCCTTAATTTACTCATTGAATTCTATAGTAAACTTTAATAGATTAAACCCAGCTAAGTCAAGTATGGTTAA GTGGCCTCCGGTTAACTCAG
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDPKVDCSIHKLAVFNPDYEDKL RIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHGAVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKG DGEVKVLLSHFPYNDLAGLRSLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ DKDKEAISSVNAGRLYGIK
Sequences:
>Translated_259_residues MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDPKVDCSIHKLAVFNPDYEDKL RIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHGAVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKG DGEVKVLLSHFPYNDLAGLRSLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ DKDKEAISSVNAGRLYGIK >Mature_259_residues MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDPKVDCSIHKLAVFNPDYEDKL RIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHGAVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKG DGEVKVLLSHFPYNDLAGLRSLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ DKDKEAISSVNAGRLYGIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29458; Mature: 29458
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDP CCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC KVDCSIHKLAVFNPDYEDKLRIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHG CCCCEEEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKGDGEVKVLLSHFPYNDLAGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH SLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCEECCCHHHHHHHHHHHC DKDKEAISSVNAGRLYGIK CHHHHHHHCCCCCEEECCC >Mature Secondary Structure MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDP CCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC KVDCSIHKLAVFNPDYEDKLRIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHG CCCCEEEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKGDGEVKVLLSHFPYNDLAGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH SLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCEECCCHHHHHHHHHHHC DKDKEAISSVNAGRLYGIK CHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA