Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041474

Identifier: 159041474

GI number: 159041474

Start: 945078

End: 945857

Strand: Reverse

Name: 159041474

Synonym: Cmaq_0902

Alternate gene names: NA

Gene position: 945857-945078 (Counterclockwise)

Preceding gene: 159041475

Following gene: 159041473

Centisome position: 45.53

GC content: 43.08

Gene sequence:

>780_bases
ATGATTGATGCACTATGCATGAGTGGTGCATACCCATTTAGGTACCTTTCAATGAGCACTGAGGCTGTTGCATCAAAATT
AGCCTCAGAGGGCTTTAAGCACTGCTTAATGTTTAACCTAACAGCCCTATTTCACAGGGATCCATGGTGGGCTAACGTGG
AGTTCGCCAGGGAGGACCCTAAGGTTGACTGTAGCATACATAAGTTAGCCGTCTTCAACCCTGACTACGAGGATAAGTTA
AGGATTAGGGAGTACAGTAGAATGGGTTACGTGGGCTTCGTCACTAGTCCAATATACCATGGCTACAGATTAATGAGGAG
GAGCGTGATAAGTAACTTAACTGAGGCCTTAAGCCATGGCGCCGTCGTAATCCTTAACCTACTGGAGGATTTAAGGCAAA
TGCATAGGGCTTATTCCTTCAGGTATAGAATCATGCTGGGTGAATTAAGTGAGGCCTTGAAGAATATAGTTAATAAGGGG
GATGGGGAGGTTAAGGTATTGTTATCCCATTTCCCTTATAATGACCTAGCTGGCTTAAGGTCACTGTACAATGGTGATGT
TTACGTGGACTTCGCATCATCACAGGTATTAGGGGCGCCTTACAATCACGTTGAGGAATTAGTTAAGCTATATGGTGCAT
CAAGGCTCGTATTATCAACAGGATTCATGATGAAGTACCCTAAGTCATCAATACTTAAGCTTCAATTATCCAAGATTCAG
GATAAGGATAAGGAGGCGATATCATCAGTAAACGCAGGTAGGCTTTATGGAATTAAGTAA

Upstream 100 bases:

>100_bases
TATCGGCTGCCGTGTCTAGGATAATTAATGCTGATATTAGTGAGGAGTCTAGGATCAAGATACTTAGGTTAAACGCCATG
AGGATTCTAGGTGAGTGAGG

Downstream 100 bases:

>100_bases
AGCACTAAATCCTTAATTTACTCATTGAATTCTATAGTAAACTTTAATAGATTAAACCCAGCTAAGTCAAGTATGGTTAA
GTGGCCTCCGGTTAACTCAG

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDPKVDCSIHKLAVFNPDYEDKL
RIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHGAVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKG
DGEVKVLLSHFPYNDLAGLRSLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ
DKDKEAISSVNAGRLYGIK

Sequences:

>Translated_259_residues
MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDPKVDCSIHKLAVFNPDYEDKL
RIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHGAVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKG
DGEVKVLLSHFPYNDLAGLRSLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ
DKDKEAISSVNAGRLYGIK
>Mature_259_residues
MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDPKVDCSIHKLAVFNPDYEDKL
RIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHGAVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKG
DGEVKVLLSHFPYNDLAGLRSLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ
DKDKEAISSVNAGRLYGIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29458; Mature: 29458

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDP
CCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
KVDCSIHKLAVFNPDYEDKLRIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHG
CCCCEEEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKGDGEVKVLLSHFPYNDLAGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
SLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ
HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCEECCCHHHHHHHHHHHC
DKDKEAISSVNAGRLYGIK
CHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MIDALCMSGAYPFRYLSMSTEAVASKLASEGFKHCLMFNLTALFHRDPWWANVEFAREDP
CCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
KVDCSIHKLAVFNPDYEDKLRIREYSRMGYVGFVTSPIYHGYRLMRRSVISNLTEALSHG
CCCCEEEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AVVILNLLEDLRQMHRAYSFRYRIMLGELSEALKNIVNKGDGEVKVLLSHFPYNDLAGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
SLYNGDVYVDFASSQVLGAPYNHVEELVKLYGASRLVLSTGFMMKYPKSSILKLQLSKIQ
HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCEECCCHHHHHHHHHHHC
DKDKEAISSVNAGRLYGIK
CHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA