Click here to switch to the map view.

The map label for this gene is 159041447

Identifier: 159041447

GI number: 159041447

Start: 918100

End: 918771

Strand: Reverse

Name: 159041447

Synonym: Cmaq_0874

Alternate gene names: NA

Gene position: 918771-918100 (Counterclockwise)

Preceding gene: 159041450

Following gene: 159041445

Centisome position: 44.22

GC content: 42.71

Gene sequence:

>672_bases
ATGCCTTATAGGCTTCATGTCTCCCTTATTCACCGTGGTGATTGGAGTGAGTTGTCCCGTAACTACCCTGGTTTAAGTGT
GGTTGGTTTATCGTCGTATGTTGTTAAGCCCAGTGAGCTTACCCTTGAGGTTGTTGCTGTTCATGCCTTGGATTCATCAT
TAATTAGGGATTTTACTCATGCATTAATGGGTGGGTTGGGTAATGTTGTTAAGGTGCTTTATGTTAATAATGTTTCACGT
AGGTACCGTGAGGTTGTCCTCCTAAGTGAGTATGATGGTGTTTTAAAATACGTATTAATTAATAATGGCTGCTTAACCGT
TCAATCACGTGTTCATAATGGTGTTAAGGAGTTCACGGCATACTTCACGGATAAGTCTAATGCAGAGTCATCATGCAGAG
CCCTTACTAGGCGTGGTGACGTTGATTTAATGAATTGCTCACTGGTGAGGGTTAAGGGTGAGTCATTTAGTAATGGCTTA
TCCTTAGGCACCATGTTAACGCATAGGGAGCTTCAAGTACTTAGGAGGGCTTATGAGGCCGGTTTCTTCGATGATACAAG
GGGTATTGGGTTGAGTGAGTTGGCTAGGGAGTTTGGGCTCTCCAAGTCTACGGTTAGTCACCACATAAGGTCGGCGGTTA
GGAAGATAATTAAATTATACTTAAGTAGGTGA

Upstream 100 bases:

>100_bases
TTTAAGTTTTTCATAGAACCTGTTCCATTAACTTATTTAATTGCGATTTGAATAGTGGTGTTGAATAATCTTTATTAAGT
AGTTTTCTTAATGTGTTATT

Downstream 100 bases:

>100_bases
CTGAGGATAAGCGTTACTTGGATTCACTGGTTTAGGAAGTACCAACCCTCCTTAGTCCTCTCACTCCACTTAACGTTAAG
CGGTAGTGCATAACCATAAA

Product: bacterio-opsin activator

Products: NA

Alternate protein names: Bacterio-Opsin Activator HTH Domain Protein; Bacterio-Opsin Activator HTH Domain-Containing Protein

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPYRLHVSLIHRGDWSELSRNYPGLSVVGLSSYVVKPSELTLEVVAVHALDSSLIRDFTHALMGGLGNVVKVLYVNNVSR
RYREVVLLSEYDGVLKYVLINNGCLTVQSRVHNGVKEFTAYFTDKSNAESSCRALTRRGDVDLMNCSLVRVKGESFSNGL
SLGTMLTHRELQVLRRAYEAGFFDDTRGIGLSELAREFGLSKSTVSHHIRSAVRKIIKLYLSR

Sequences:

>Translated_223_residues
MPYRLHVSLIHRGDWSELSRNYPGLSVVGLSSYVVKPSELTLEVVAVHALDSSLIRDFTHALMGGLGNVVKVLYVNNVSR
RYREVVLLSEYDGVLKYVLINNGCLTVQSRVHNGVKEFTAYFTDKSNAESSCRALTRRGDVDLMNCSLVRVKGESFSNGL
SLGTMLTHRELQVLRRAYEAGFFDDTRGIGLSELAREFGLSKSTVSHHIRSAVRKIIKLYLSR
>Mature_222_residues
PYRLHVSLIHRGDWSELSRNYPGLSVVGLSSYVVKPSELTLEVVAVHALDSSLIRDFTHALMGGLGNVVKVLYVNNVSRR
YREVVLLSEYDGVLKYVLINNGCLTVQSRVHNGVKEFTAYFTDKSNAESSCRALTRRGDVDLMNCSLVRVKGESFSNGLS
LGTMLTHRELQVLRRAYEAGFFDDTRGIGLSELAREFGLSKSTVSHHIRSAVRKIIKLYLSR

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24982; Mature: 24851

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRLHVSLIHRGDWSELSRNYPGLSVVGLSSYVVKPSELTLEVVAVHALDSSLIRDFTH
CCEEEEEEEEECCCHHHHHCCCCCEEEEECHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
ALMGGLGNVVKVLYVNNVSRRYREVVLLSEYDGVLKYVLINNGCLTVQSRVHNGVKEFTA
HHHHCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCEEEEHHHHHCCHHHHHH
YFTDKSNAESSCRALTRRGDVDLMNCSLVRVKGESFSNGLSLGTMLTHRELQVLRRAYEA
HHCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GFFDDTRGIGLSELAREFGLSKSTVSHHIRSAVRKIIKLYLSR
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYRLHVSLIHRGDWSELSRNYPGLSVVGLSSYVVKPSELTLEVVAVHALDSSLIRDFTH
CEEEEEEEEECCCHHHHHCCCCCEEEEECHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
ALMGGLGNVVKVLYVNNVSRRYREVVLLSEYDGVLKYVLINNGCLTVQSRVHNGVKEFTA
HHHHCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCEEEEHHHHHCCHHHHHH
YFTDKSNAESSCRALTRRGDVDLMNCSLVRVKGESFSNGLSLGTMLTHRELQVLRRAYEA
HHCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GFFDDTRGIGLSELAREFGLSKSTVSHHIRSAVRKIIKLYLSR
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA