Click here to switch to the map view.

The map label for this gene is dsvC [H]

Identifier: 159041429

GI number: 159041429

Start: 901290

End: 901634

Strand: Reverse

Name: dsvC [H]

Synonym: Cmaq_0856

Alternate gene names: 159041429

Gene position: 901634-901290 (Counterclockwise)

Preceding gene: 159041434

Following gene: 159041428

Centisome position: 43.4

GC content: 47.54

Gene sequence:

>345_bases
ATGTCCCTCAAGTACATGGAGGTAGGCGGAAGGAAGATTGAGCTAGATGAGGATGGTTTCCTAAAGGATCCATCAACATG
GAATGAGGAAGTGGCTAAAATACTATGCAGGGAGGAGTGCCGTGACCCAGATACTGGGCAAATGGGCGTTATGAAGGATG
AGCATTGGAAGGTTGTTAAGTACTTAAGACAATACTGGGAGAGATTCGGCATGTGCCCACCAATAAGGATGCTCGTTAAG
GAAACGGGAATACCGCTTCAGAGGATATATCAATTATTCCCAAATGGGCCAGCTAAGGGAGCTTGTAGGGTTGCTGGTGC
ACCCAAACCCACTGGTTGCGTGTAA

Upstream 100 bases:

>100_bases
GTATTTATAAGCACTCAAGTTTAAAAAAGAAACCCTCATAAAAGGCCACATAAGGCTTCACAATAGTTAAGGATTAATTA
TTAACCATACTGAAACACTC

Downstream 100 bases:

>100_bases
AATCAAAGTGACATTATTTACCTGCCTTAAAGGAAACTTCTATACCGAAGGTCCTTGGTGAAAGGCTTAAAACCCTAGAT
TTATTTTATAACTAACCTAT

Product: DsrC family protein

Products: NA

Alternate protein names: Desulfoviridin subunit gamma; Hydrogensulfite reductase subunit gamma [H]

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSLKYMEVGGRKIELDEDGFLKDPSTWNEEVAKILCREECRDPDTGQMGVMKDEHWKVVKYLRQYWERFGMCPPIRMLVK
ETGIPLQRIYQLFPNGPAKGACRVAGAPKPTGCV

Sequences:

>Translated_114_residues
MSLKYMEVGGRKIELDEDGFLKDPSTWNEEVAKILCREECRDPDTGQMGVMKDEHWKVVKYLRQYWERFGMCPPIRMLVK
ETGIPLQRIYQLFPNGPAKGACRVAGAPKPTGCV
>Mature_113_residues
SLKYMEVGGRKIELDEDGFLKDPSTWNEEVAKILCREECRDPDTGQMGVMKDEHWKVVKYLRQYWERFGMCPPIRMLVKE
TGIPLQRIYQLFPNGPAKGACRVAGAPKPTGCV

Specific function: Unknown

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrC/tusE family [H]

Homologues:

Organism=Escherichia coli, GI87081811, Length=112, Percent_Identity=36.6071428571429, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007453 [H]

Pfam domain/function: PF04358 DsrC [H]

EC number: =1.8.99.3 [H]

Molecular weight: Translated: 13064; Mature: 12933

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKYMEVGGRKIELDEDGFLKDPSTWNEEVAKILCREECRDPDTGQMGVMKDEHWKVVK
CCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
YLRQYWERFGMCPPIRMLVKETGIPLQRIYQLFPNGPAKGACRVAGAPKPTGCV
HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SLKYMEVGGRKIELDEDGFLKDPSTWNEEVAKILCREECRDPDTGQMGVMKDEHWKVVK
CCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
YLRQYWERFGMCPPIRMLVKETGIPLQRIYQLFPNGPAKGACRVAGAPKPTGCV
HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436111; 1555572 [H]