| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041355
Identifier: 159041355
GI number: 159041355
Start: 816485
End: 817651
Strand: Reverse
Name: 159041355
Synonym: Cmaq_0782
Alternate gene names: NA
Gene position: 817651-816485 (Counterclockwise)
Preceding gene: 159041356
Following gene: 159041354
Centisome position: 39.36
GC content: 43.02
Gene sequence:
>1167_bases ATGGGTAAGAAAATCCTAGTGCTGGGTGGTGGCGTTGGTGGTGTGGTAGCTGCTAAGAAACTTGCAGAAAGGCTAAGGAA TCGTGTCGATGCTGAAATAACATTAATAAGTGACACTGACTATTACCTACTACCACCGTTACTGGTTAACATTGCGTTAG GTGATATGGATCCGGCGCAGGCTCAATTACCATTATCAATGCTTAGTAAAAGAGGCGTCAAGAGTGTTAAAGCCGCTGTA ACTAAGATTGACCCTGATAATAGGGTTGTTGAGACTGATAAAGGCAAGTTTAACTATGATTATTTACTGGCGAGCCTTGG TACAGAGTTTGATTTTAAATCATATAACTTAGGGGTTGGTTACCATAACTACACCCTCGATGGTGCGCTTAAGCTAAGGG AGGCATTAAGGAACTTTAAGGGGGGAAGTGTAGTAGTGTTTACCCCTGAGCCATTATATAGGTGTGGTGTTTACCCGTTT GAAATCATTGCTCAATTAGATACAATATTTAGGAAGAGGGGGATTAGGGATAAGGTTGATTTAACGCTTATACACCCATT TGAGAAGCCTATACAGCCACTTGGCCCTGAGGCTGTTAAGATAACTGAGGATGTATTTGCTCAAAAGGGCATTAAATACA TTGGTAATGCCAAGCCTGTTGAGGTTGATGATAAGGGTAAGGTTGTCGTAACCACTTCAGATAAGGTTAAGTACGATTTA CTCATAGTTGTTCCACCAGCTAGATTACCTAAGCCCTTCGATGGAACACCGCTAGTGGTTGATACTCCAAGCGGTAAATG GACCGCAATAAACGTGTACACTGGTAGGAGTATTAAGTATGATGATGTCTACCTACCTGGGGAGCATTCCATGCCCGCAA TAGGCTTACCCACAGCTGGAGTACCAGTGCATTTCACCGCATTGGCAAGCACCGCATCAATAGCAGGTGAATTACTTGGT GAACCGGTGGATCCAGCTCAAATAAACGCAATGGCCTGCGCCATGGATTACGGTGACTTAGGCATGATGTTCAACTGCGA CATTAAGCTTGACCTTAAGAATAATAAAGCCCTCTGGGTAGGCAACTGCTACAGTATATTGACATCACCATTAGGTAAGC TTATAAAGGATCTATTCTACAAGACATGGCTACAGACAACAATGTAA
Upstream 100 bases:
>100_bases TAATGTAGGTACTATGAAAATGTAAGCTAAGCGGTATTTCACATGCGCTGAAGTATCATAGTATTAATGCTTAAAAGTCA AGTAGTGCACTGTGGATACT
Downstream 100 bases:
>100_bases GGTGAATGACCATGACAACCCAAGAACAGGTTCAAGTAAGCCCTGATGAAAAACTCGCCGAGGCATTAAGTATACTTGCT GAGAACGCTGATGAGTTGAA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MGKKILVLGGGVGGVVAAKKLAERLRNRVDAEITLISDTDYYLLPPLLVNIALGDMDPAQAQLPLSMLSKRGVKSVKAAV TKIDPDNRVVETDKGKFNYDYLLASLGTEFDFKSYNLGVGYHNYTLDGALKLREALRNFKGGSVVVFTPEPLYRCGVYPF EIIAQLDTIFRKRGIRDKVDLTLIHPFEKPIQPLGPEAVKITEDVFAQKGIKYIGNAKPVEVDDKGKVVVTTSDKVKYDL LIVVPPARLPKPFDGTPLVVDTPSGKWTAINVYTGRSIKYDDVYLPGEHSMPAIGLPTAGVPVHFTALASTASIAGELLG EPVDPAQINAMACAMDYGDLGMMFNCDIKLDLKNNKALWVGNCYSILTSPLGKLIKDLFYKTWLQTTM
Sequences:
>Translated_388_residues MGKKILVLGGGVGGVVAAKKLAERLRNRVDAEITLISDTDYYLLPPLLVNIALGDMDPAQAQLPLSMLSKRGVKSVKAAV TKIDPDNRVVETDKGKFNYDYLLASLGTEFDFKSYNLGVGYHNYTLDGALKLREALRNFKGGSVVVFTPEPLYRCGVYPF EIIAQLDTIFRKRGIRDKVDLTLIHPFEKPIQPLGPEAVKITEDVFAQKGIKYIGNAKPVEVDDKGKVVVTTSDKVKYDL LIVVPPARLPKPFDGTPLVVDTPSGKWTAINVYTGRSIKYDDVYLPGEHSMPAIGLPTAGVPVHFTALASTASIAGELLG EPVDPAQINAMACAMDYGDLGMMFNCDIKLDLKNNKALWVGNCYSILTSPLGKLIKDLFYKTWLQTTM >Mature_387_residues GKKILVLGGGVGGVVAAKKLAERLRNRVDAEITLISDTDYYLLPPLLVNIALGDMDPAQAQLPLSMLSKRGVKSVKAAVT KIDPDNRVVETDKGKFNYDYLLASLGTEFDFKSYNLGVGYHNYTLDGALKLREALRNFKGGSVVVFTPEPLYRCGVYPFE IIAQLDTIFRKRGIRDKVDLTLIHPFEKPIQPLGPEAVKITEDVFAQKGIKYIGNAKPVEVDDKGKVVVTTSDKVKYDLL IVVPPARLPKPFDGTPLVVDTPSGKWTAINVYTGRSIKYDDVYLPGEHSMPAIGLPTAGVPVHFTALASTASIAGELLGE PVDPAQINAMACAMDYGDLGMMFNCDIKLDLKNNKALWVGNCYSILTSPLGKLIKDLFYKTWLQTTM
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI10864011, Length=301, Percent_Identity=24.2524916943522, Blast_Score=79, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 42458; Mature: 42327
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKILVLGGGVGGVVAAKKLAERLRNRVDAEITLISDTDYYLLPPLLVNIALGDMDPAQ CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHHHEEEEECCCCHHH AQLPLSMLSKRGVKSVKAAVTKIDPDNRVVETDKGKFNYDYLLASLGTEFDFKSYNLGVG HHCCHHHHHHCCHHHHHHHHEEECCCCCEEECCCCCCCHHHHEEHHCCCCCCCEEEEECC YHNYTLDGALKLREALRNFKGGSVVVFTPEPLYRCGVYPFEIIAQLDTIFRKRGIRDKVD EECEEEHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC LTLIHPFEKPIQPLGPEAVKITEDVFAQKGIKYIGNAKPVEVDDKGKVVVTTSDKVKYDL EEEECCCCCCCCCCCCCCEEHHHHHHHHCCHHHHCCCCCEEECCCCCEEEEECCCEEEEE LIVVPPARLPKPFDGTPLVVDTPSGKWTAINVYTGRSIKYDDVYLPGEHSMPAIGLPTAG EEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEECCEEEECCEEECCCCCCCCCCCCCCC VPVHFTALASTASIAGELLGEPVDPAQINAMACAMDYGDLGMMFNCDIKLDLKNNKALWV CCEEEHHHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCCCEEEEEEEEEEECCCCEEEE GNCYSILTSPLGKLIKDLFYKTWLQTTM ECHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKKILVLGGGVGGVVAAKKLAERLRNRVDAEITLISDTDYYLLPPLLVNIALGDMDPAQ CCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHHHEEEEECCCCHHH AQLPLSMLSKRGVKSVKAAVTKIDPDNRVVETDKGKFNYDYLLASLGTEFDFKSYNLGVG HHCCHHHHHHCCHHHHHHHHEEECCCCCEEECCCCCCCHHHHEEHHCCCCCCCEEEEECC YHNYTLDGALKLREALRNFKGGSVVVFTPEPLYRCGVYPFEIIAQLDTIFRKRGIRDKVD EECEEEHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC LTLIHPFEKPIQPLGPEAVKITEDVFAQKGIKYIGNAKPVEVDDKGKVVVTTSDKVKYDL EEEECCCCCCCCCCCCCCEEHHHHHHHHCCHHHHCCCCCEEECCCCCEEEEECCCEEEEE LIVVPPARLPKPFDGTPLVVDTPSGKWTAINVYTGRSIKYDDVYLPGEHSMPAIGLPTAG EEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEECCEEEECCEEECCCCCCCCCCCCCCC VPVHFTALASTASIAGELLGEPVDPAQINAMACAMDYGDLGMMFNCDIKLDLKNNKALWV CCEEEHHHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCCCEEEEEEEEEEECCCCEEEE GNCYSILTSPLGKLIKDLFYKTWLQTTM ECHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA