| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041344
Identifier: 159041344
GI number: 159041344
Start: 803751
End: 806378
Strand: Reverse
Name: 159041344
Synonym: Cmaq_0771
Alternate gene names: NA
Gene position: 806378-803751 (Counterclockwise)
Preceding gene: 159041348
Following gene: 159041343
Centisome position: 38.81
GC content: 42.47
Gene sequence:
>2628_bases ATGAACCCGTTATCGAAAACCTCAGTAAGTGAAGTAAAGTTAACTACAATAATGGTGGCGGTAAGCCTACTAGCCCTAGT GGGTTTCCTTAAGGTAACCTACGCTCAAAACACCCCACCACCCTTCGTTATATTAAATGAACAAGCCACGCCATCACTAA CACCCGTTGGCGTCTCTAAGTTAACGTTAACCGTAGAGTACACTGGTGGCTACTACTTATATGATGTCTACTTCCAATTA CAACCAACCCTCTCATGCGGTAATTACACTGTTTCACCAGGCTCAATATTCATTGATTGGATTAGTCCCCAACAGGAATT AACCTTAACTTACCTTATAAATGGTTCATTACCCATTAATTGTCAGGCAAACCTTAACGTTAACTGGGGTGGAGAATCCA AGTACTCTCAATTAACATCATCATACGTTAATGCTGGTGGTTCAGGTTCAACAAGCATAACATTACCTATAGTGATATAC GGTGAACCGAATATTGACATTAACGTTAATCAAGGCTACTTAATATATGGTTCAATCAACCCAATCACATTAACTGTAAC AAATAATGGAAGCGGACCAATATACAATATGGCTATTTCAATTCAGGCCAATGGAGCCTACCTAAGCCCCAGTGGAGTAT CAACTGTAATTAATTACCTTAATCCCGGTGAATCACTACCATTAATGATTAACGTAGTACCCACTTCAACTGCCTCAGTG ACATTAACCATAACCTACAGTGGCATAACTCAAAGCGGTGATTCAGTATCAGGCTCCTCAACAATAAGTATGAGTACCTT ATCAGTGTCAGCAAGCCAAGTTACCGTATATCCACTTAACTCCACGCTTAGTCCAGGGCCTGGGATTCTTGAGATAGGTG TACGTAATCTAAACCCGGTAACACTGTATAATGTGACTATTCAACTGGTTTCAACACAGGGATTGATACTAAGGGGTAAT AGTACAATAATGGTATCAAGCATACCCAGTGGCGGTTACTTAACCCTCACTGTACCGGTGGTTGTACCATTATCCGCCAC AACCGCCTCAATAAGTTACGTATTATCATTCCAGTTACCTAACGGTTACGTAAGCAGTGGAGAAGGTTCACTCACCTTAA GCATCTATGGTGTGGCTAACCCATTATCAGTACTACTCCTTAACTCAACAATAAGCCCTGGATTAGGGGAATTAACGCTT CGTGTACTTAACTCAGCCTCAGTGACATTATACAATGTTAGCCTAGTGTTTAACTCCGCAGGTGGGTTAAGTTTAGGTGG CAGTGAGTATAATATACCTGAACTACCCCCAGGTGGTTCATACTATATTTCAGTACCCGTAATGACCCCATCAACAACAG GCACGGCAACCATTAGCTACACACTCTACTACTACCTAACACCAAGCACATATGGTGGAAGCATAACTGGGTCATTACCA GTCAACGTAATTAGCCCCCAGTCAATATTAACTGTTTACCCACTTAACTCAACCATAGGTATTGGTAATGAGACAATACC CATCGTTATCAGGAATAATTTAGGATCAAGCCTAAGTAACGTCACCTTCACAATAACCTCAGCACAGGGGGCGTATCCAC TAGTGACTAGTTTTAACATTGGTGAAATACAACCGTATAGTGCACGCATGGTTACTGTACCGTTAATGGTACCTTTATCA GCGGGCTCAGTGGTGATTAACTATGTTTTAACATACGGCGTAGGCAAGTACGTAAGTAACGTTAATGGTGAATTAAACCT AGGGGTGTCAAGTGCACCCAGTGTCATAGCCGTGGTTTATCCACTTAACTCAACCCTCAATGCTGGTTTAGGTAAGTTAA TACTAGGTATACGTAATAATGAACCAGTACCACTCTACAATTTAACGCTAATCTTCAATTCAGTGAACGGCATGTCTATT ACTAATACTGAGTATCATATTAATGAAGTTGGGGCCGGGGGAACCTACTACTTAACGGTACCTGCAGCCATACCATCATC ATCAAGCTCAGTCTCACTAAGCTACACCCTAATGTACAGTTACGCTGGTGGTGAGGGTAATGTTGAGGGCCAAATAACCA TGAGTGTTGCTGGGTTACCGCAAATCCTAATAACTGGTTACACCATTGCACCAACAGTAGCCACGGTGGGTACTGATGTA TCAATATCATTAACACTAGTTAACTCAGGTCCAGTAACTGCAAATAACCTGAACGTAACAATGCTAACCAGTCCCGGATT AGAAGCCATTAGTGGTAGGAGTATTTACCTCGGTTCACTTGGATCCCAGTCACTAAGTAATGTTGCCTTCACAGTGCTAC CAGTTAGGCCGCTTAACGGTTCAATAATCTTCATAATCACATTCACTGATCAGTATGGGCAGCTTCACAGGATTTACTAC AGTGTGCCGATTAGGGTGTTTGGGAATTCAACCAGGTTCGCTGGCTTCCCAGGTAGCAATAGTAGTGGTAGGTTCTTCAC AAGGGTCTTCACAACCACGGCTAGTAGAGTAAGTGGTAGTAGGTATGGGTTAGTAACCTACATCACAATTGCGGTGGTGG TGATTATTGTAGTTGCCGTGGTTGTACTTGCCTTAAGGAGGAGGGGTGGTGGTAGTGAGGGTCATTGA
Upstream 100 bases:
>100_bases CAATGAACGCCATGGTTAATTCGCATACTTCTAGGGTATTTAAACTAGTACATATAACTGGTGAGTATGGTTTATAAGGT TTATAGATTGCCGATATCGT
Downstream 100 bases:
>100_bases TTACCTTAACTTAGCCTGGAGGGCATTATGGGAGAGGAGAGGTAGGACTATTGGGGCTATTGCGGGCATAGTTATAGCAA TAATAGCCCTAGGCCTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 875; Mature: 875
Protein sequence:
>875_residues MNPLSKTSVSEVKLTTIMVAVSLLALVGFLKVTYAQNTPPPFVILNEQATPSLTPVGVSKLTLTVEYTGGYYLYDVYFQL QPTLSCGNYTVSPGSIFIDWISPQQELTLTYLINGSLPINCQANLNVNWGGESKYSQLTSSYVNAGGSGSTSITLPIVIY GEPNIDINVNQGYLIYGSINPITLTVTNNGSGPIYNMAISIQANGAYLSPSGVSTVINYLNPGESLPLMINVVPTSTASV TLTITYSGITQSGDSVSGSSTISMSTLSVSASQVTVYPLNSTLSPGPGILEIGVRNLNPVTLYNVTIQLVSTQGLILRGN STIMVSSIPSGGYLTLTVPVVVPLSATTASISYVLSFQLPNGYVSSGEGSLTLSIYGVANPLSVLLLNSTISPGLGELTL RVLNSASVTLYNVSLVFNSAGGLSLGGSEYNIPELPPGGSYYISVPVMTPSTTGTATISYTLYYYLTPSTYGGSITGSLP VNVISPQSILTVYPLNSTIGIGNETIPIVIRNNLGSSLSNVTFTITSAQGAYPLVTSFNIGEIQPYSARMVTVPLMVPLS AGSVVINYVLTYGVGKYVSNVNGELNLGVSSAPSVIAVVYPLNSTLNAGLGKLILGIRNNEPVPLYNLTLIFNSVNGMSI TNTEYHINEVGAGGTYYLTVPAAIPSSSSSVSLSYTLMYSYAGGEGNVEGQITMSVAGLPQILITGYTIAPTVATVGTDV SISLTLVNSGPVTANNLNVTMLTSPGLEAISGRSIYLGSLGSQSLSNVAFTVLPVRPLNGSIIFIITFTDQYGQLHRIYY SVPIRVFGNSTRFAGFPGSNSSGRFFTRVFTTTASRVSGSRYGLVTYITIAVVVIIVVAVVVLALRRRGGGSEGH
Sequences:
>Translated_875_residues MNPLSKTSVSEVKLTTIMVAVSLLALVGFLKVTYAQNTPPPFVILNEQATPSLTPVGVSKLTLTVEYTGGYYLYDVYFQL QPTLSCGNYTVSPGSIFIDWISPQQELTLTYLINGSLPINCQANLNVNWGGESKYSQLTSSYVNAGGSGSTSITLPIVIY GEPNIDINVNQGYLIYGSINPITLTVTNNGSGPIYNMAISIQANGAYLSPSGVSTVINYLNPGESLPLMINVVPTSTASV TLTITYSGITQSGDSVSGSSTISMSTLSVSASQVTVYPLNSTLSPGPGILEIGVRNLNPVTLYNVTIQLVSTQGLILRGN STIMVSSIPSGGYLTLTVPVVVPLSATTASISYVLSFQLPNGYVSSGEGSLTLSIYGVANPLSVLLLNSTISPGLGELTL RVLNSASVTLYNVSLVFNSAGGLSLGGSEYNIPELPPGGSYYISVPVMTPSTTGTATISYTLYYYLTPSTYGGSITGSLP VNVISPQSILTVYPLNSTIGIGNETIPIVIRNNLGSSLSNVTFTITSAQGAYPLVTSFNIGEIQPYSARMVTVPLMVPLS AGSVVINYVLTYGVGKYVSNVNGELNLGVSSAPSVIAVVYPLNSTLNAGLGKLILGIRNNEPVPLYNLTLIFNSVNGMSI TNTEYHINEVGAGGTYYLTVPAAIPSSSSSVSLSYTLMYSYAGGEGNVEGQITMSVAGLPQILITGYTIAPTVATVGTDV SISLTLVNSGPVTANNLNVTMLTSPGLEAISGRSIYLGSLGSQSLSNVAFTVLPVRPLNGSIIFIITFTDQYGQLHRIYY SVPIRVFGNSTRFAGFPGSNSSGRFFTRVFTTTASRVSGSRYGLVTYITIAVVVIIVVAVVVLALRRRGGGSEGH >Mature_875_residues MNPLSKTSVSEVKLTTIMVAVSLLALVGFLKVTYAQNTPPPFVILNEQATPSLTPVGVSKLTLTVEYTGGYYLYDVYFQL QPTLSCGNYTVSPGSIFIDWISPQQELTLTYLINGSLPINCQANLNVNWGGESKYSQLTSSYVNAGGSGSTSITLPIVIY GEPNIDINVNQGYLIYGSINPITLTVTNNGSGPIYNMAISIQANGAYLSPSGVSTVINYLNPGESLPLMINVVPTSTASV TLTITYSGITQSGDSVSGSSTISMSTLSVSASQVTVYPLNSTLSPGPGILEIGVRNLNPVTLYNVTIQLVSTQGLILRGN STIMVSSIPSGGYLTLTVPVVVPLSATTASISYVLSFQLPNGYVSSGEGSLTLSIYGVANPLSVLLLNSTISPGLGELTL RVLNSASVTLYNVSLVFNSAGGLSLGGSEYNIPELPPGGSYYISVPVMTPSTTGTATISYTLYYYLTPSTYGGSITGSLP VNVISPQSILTVYPLNSTIGIGNETIPIVIRNNLGSSLSNVTFTITSAQGAYPLVTSFNIGEIQPYSARMVTVPLMVPLS AGSVVINYVLTYGVGKYVSNVNGELNLGVSSAPSVIAVVYPLNSTLNAGLGKLILGIRNNEPVPLYNLTLIFNSVNGMSI TNTEYHINEVGAGGTYYLTVPAAIPSSSSSVSLSYTLMYSYAGGEGNVEGQITMSVAGLPQILITGYTIAPTVATVGTDV SISLTLVNSGPVTANNLNVTMLTSPGLEAISGRSIYLGSLGSQSLSNVAFTVLPVRPLNGSIIFIITFTDQYGQLHRIYY SVPIRVFGNSTRFAGFPGSNSSGRFFTRVFTTTASRVSGSRYGLVTYITIAVVVIIVVAVVVLALRRRGGGSEGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91563; Mature: 91563
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLSKTSVSEVKLTTIMVAVSLLALVGFLKVTYAQNTPPPFVILNEQATPSLTPVGVSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCCCCEE LTLTVEYTGGYYLYDVYFQLQPTLSCGNYTVSPGSIFIDWISPQQELTLTYLINGSLPIN EEEEEEECCCEEEEEEEEEEEEEEECCCEEECCCCEEEEEECCCCEEEEEEEECCCEEEE CQANLNVNWGGESKYSQLTSSYVNAGGSGSTSITLPIVIYGEPNIDINVNQGYLIYGSIN EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEEECC PITLTVTNNGSGPIYNMAISIQANGAYLSPSGVSTVINYLNPGESLPLMINVVPTSTASV EEEEEEECCCCCCEEEEEEEEEECCEEECCCCHHHHHHHCCCCCCCCEEEEEEECCCCEE TLTITYSGITQSGDSVSGSSTISMSTLSVSASQVTVYPLNSTLSPGPGILEIGVRNLNPV EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCE TLYNVTIQLVSTQGLILRGNSTIMVSSIPSGGYLTLTVPVVVPLSATTASISYVLSFQLP EEEEEEEEEEECCCEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEECC NGYVSSGEGSLTLSIYGVANPLSVLLLNSTISPGLGELTLRVLNSASVTLYNVSLVFNSA CCEEECCCCEEEEEEEECCCCEEEEEEECCCCCCHHHEEEEEECCCEEEEEEEEEEEECC GGLSLGGSEYNIPELPPGGSYYISVPVMTPSTTGTATISYTLYYYLTPSTYGGSITGSLP CCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEECCCE VNVISPQSILTVYPLNSTIGIGNETIPIVIRNNLGSSLSNVTFTITSAQGAYPLVTSFNI EEEECCCCEEEEEECCCEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCC GEIQPYSARMVTVPLMVPLSAGSVVINYVLTYGVGKYVSNVNGELNLGVSSAPSVIAVVY CCCCCCCEEEEEEEEEEEECCCCEEEEHHHHHCHHHHHHCCCCEEEECCCCCCCEEEEEE PLNSTLNAGLGKLILGIRNNEPVPLYNLTLIFNSVNGMSITNTEYHINEVGAGGTYYLTV ECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEECCEEEEEEECCCCEEEEEE PAAIPSSSSSVSLSYTLMYSYAGGEGNVEGQITMSVAGLPQILITGYTIAPTVATVGTDV EEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEECEEECCEEEECCCCE SISLTLVNSGPVTANNLNVTMLTSPGLEAISGRSIYLGSLGSQSLSNVAFTVLPVRPLNG EEEEEEEECCCEEECCEEEEEEECCCCHHCCCCEEEEECCCCCCCCCEEEEEEEEEECCC SIIFIITFTDQYGQLHRIYYSVPIRVFGNSTRFAGFPGSNSSGRFFTRVFTTTASRVSGS CEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEEEHHHHCCCC RYGLVTYITIAVVVIIVVAVVVLALRRRGGGSEGH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPLSKTSVSEVKLTTIMVAVSLLALVGFLKVTYAQNTPPPFVILNEQATPSLTPVGVSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCCCCEE LTLTVEYTGGYYLYDVYFQLQPTLSCGNYTVSPGSIFIDWISPQQELTLTYLINGSLPIN EEEEEEECCCEEEEEEEEEEEEEEECCCEEECCCCEEEEEECCCCEEEEEEEECCCEEEE CQANLNVNWGGESKYSQLTSSYVNAGGSGSTSITLPIVIYGEPNIDINVNQGYLIYGSIN EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEEECC PITLTVTNNGSGPIYNMAISIQANGAYLSPSGVSTVINYLNPGESLPLMINVVPTSTASV EEEEEEECCCCCCEEEEEEEEEECCEEECCCCHHHHHHHCCCCCCCCEEEEEEECCCCEE TLTITYSGITQSGDSVSGSSTISMSTLSVSASQVTVYPLNSTLSPGPGILEIGVRNLNPV EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCE TLYNVTIQLVSTQGLILRGNSTIMVSSIPSGGYLTLTVPVVVPLSATTASISYVLSFQLP EEEEEEEEEEECCCEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEECC NGYVSSGEGSLTLSIYGVANPLSVLLLNSTISPGLGELTLRVLNSASVTLYNVSLVFNSA CCEEECCCCEEEEEEEECCCCEEEEEEECCCCCCHHHEEEEEECCCEEEEEEEEEEEECC GGLSLGGSEYNIPELPPGGSYYISVPVMTPSTTGTATISYTLYYYLTPSTYGGSITGSLP CCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEECCCE VNVISPQSILTVYPLNSTIGIGNETIPIVIRNNLGSSLSNVTFTITSAQGAYPLVTSFNI EEEECCCCEEEEEECCCEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCC GEIQPYSARMVTVPLMVPLSAGSVVINYVLTYGVGKYVSNVNGELNLGVSSAPSVIAVVY CCCCCCCEEEEEEEEEEEECCCCEEEEHHHHHCHHHHHHCCCCEEEECCCCCCCEEEEEE PLNSTLNAGLGKLILGIRNNEPVPLYNLTLIFNSVNGMSITNTEYHINEVGAGGTYYLTV ECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEECCEEEEEEECCCCEEEEEE PAAIPSSSSSVSLSYTLMYSYAGGEGNVEGQITMSVAGLPQILITGYTIAPTVATVGTDV EEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEECEEECCEEEECCCCE SISLTLVNSGPVTANNLNVTMLTSPGLEAISGRSIYLGSLGSQSLSNVAFTVLPVRPLNG EEEEEEEECCCEEECCEEEEEEECCCCHHCCCCEEEEECCCCCCCCCEEEEEEEEEECCC SIIFIITFTDQYGQLHRIYYSVPIRVFGNSTRFAGFPGSNSSGRFFTRVFTTTASRVSGS CEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEEEHHHHCCCC RYGLVTYITIAVVVIIVVAVVVLALRRRGGGSEGH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA