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The map label for this gene is vdlD [H]

Identifier: 159041298

GI number: 159041298

Start: 757900

End: 758883

Strand: Reverse

Name: vdlD [H]

Synonym: Cmaq_0724

Alternate gene names: 159041298

Gene position: 758883-757900 (Counterclockwise)

Preceding gene: 159041301

Following gene: 159041296

Centisome position: 36.53

GC content: 43.8

Gene sequence:

>984_bases
ATGAAATACTACATAAGTATGGTCAGCATTAGAGATACTGAGGTTACTCTCCTTGAAATGGTTCAACCATTTGACGCTAA
TTCTATTGGTAGGTTATTCGGTGGTAGGATACTGGAGTGGATTGCTAACGTTGGTACAGTGGCCACTGTTAAGTTTTCCC
GGGGACCAACCGTGTTGGCTTACATGGATAGGCACTTCTTCCTAGCCCCAGCCTTCATTGGTGATTCAATCACACTTAAG
GCTAGGGTTGAGTACGTGGGTAGGTCATCAATGGAGACTTACATTGAGGCTGTTAGACGCCATGGTGGTGATCAAGTAAT
TATGACCATGACCACGGCGGCATACGTTGCTGTTGATGATTATGGGCAGCCTAGGTTAATTAGGAATGAACTTAAGCCTA
ATCCGGATGAATTAATGATTTATAATAATGCCAGGAGTAGGTATGAGGCTAGGAAGAGTAAGATAGTGAATAGGCGTGAG
GAGAGGTATAATGTTAATGATCCAACGGAGAATCTTAGGTGGAGGGTTGAGTCAAACAGATGGGTTACCCCTCAGGACGC
CTTCATGTCTAACATGGTTTCCGCAGGCAGATTACTCGCCTGGATTGATAATATTGCTGCATCCCTGGCTAGTGAATACG
CTAAGTCAGTGGTGGTAACTGGGTCAATTGATGATACAGTATTTTATTCACCAATAAGAACCGGCGAGATTGTTAAGATT
GCTGTAGGAATAAGTTACGTTGGTAAGACTAGCTTGGAGACTTTAATACACGTCACCACTGAGGACGCCTATGGTAACGT
TAAGAGGGTGTGTACAGCCTACTACACTTACATTGCTATTGATGATAAAGGGAAGCCTCAGCCTGTTCCACAATATCAGC
CGGCTAATGATTATGAGAGGAAGCTCTTTGAGGAGGGGGCGAGGAGGAAGATGCTTAGGGATGAGGAGATTAAGAGACTT
AAGGAGTCAATGATTATTAAGTAA

Upstream 100 bases:

>100_bases
GGGATCAGCCTTAATTCAGCGGCCGTGGTCTAGTGGTCTAGGATGGCGGCCCCCCGTGCGGCGGTGCGTGATTTAATGGG
CGAATTATTTATTAAGGCTT

Downstream 100 bases:

>100_bases
TTATCTTAACGCCACTCGGCTTAGGCATCCTCCTAACAAGCTCTGGGATACTTAACGCCTCACCTCCAGCGGCCTTAATC
TTATCAATGGCTGTTTTAGA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKYYISMVSIRDTEVTLLEMVQPFDANSIGRLFGGRILEWIANVGTVATVKFSRGPTVLAYMDRHFFLAPAFIGDSITLK
ARVEYVGRSSMETYIEAVRRHGGDQVIMTMTTAAYVAVDDYGQPRLIRNELKPNPDELMIYNNARSRYEARKSKIVNRRE
ERYNVNDPTENLRWRVESNRWVTPQDAFMSNMVSAGRLLAWIDNIAASLASEYAKSVVVTGSIDDTVFYSPIRTGEIVKI
AVGISYVGKTSLETLIHVTTEDAYGNVKRVCTAYYTYIAIDDKGKPQPVPQYQPANDYERKLFEEGARRKMLRDEEIKRL
KESMIIK

Sequences:

>Translated_327_residues
MKYYISMVSIRDTEVTLLEMVQPFDANSIGRLFGGRILEWIANVGTVATVKFSRGPTVLAYMDRHFFLAPAFIGDSITLK
ARVEYVGRSSMETYIEAVRRHGGDQVIMTMTTAAYVAVDDYGQPRLIRNELKPNPDELMIYNNARSRYEARKSKIVNRRE
ERYNVNDPTENLRWRVESNRWVTPQDAFMSNMVSAGRLLAWIDNIAASLASEYAKSVVVTGSIDDTVFYSPIRTGEIVKI
AVGISYVGKTSLETLIHVTTEDAYGNVKRVCTAYYTYIAIDDKGKPQPVPQYQPANDYERKLFEEGARRKMLRDEEIKRL
KESMIIK
>Mature_327_residues
MKYYISMVSIRDTEVTLLEMVQPFDANSIGRLFGGRILEWIANVGTVATVKFSRGPTVLAYMDRHFFLAPAFIGDSITLK
ARVEYVGRSSMETYIEAVRRHGGDQVIMTMTTAAYVAVDDYGQPRLIRNELKPNPDELMIYNNARSRYEARKSKIVNRRE
ERYNVNDPTENLRWRVESNRWVTPQDAFMSNMVSAGRLLAWIDNIAASLASEYAKSVVVTGSIDDTVFYSPIRTGEIVKI
AVGISYVGKTSLETLIHVTTEDAYGNVKRVCTAYYTYIAIDDKGKPQPVPQYQPANDYERKLFEEGARRKMLRDEEIKRL
KESMIIK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528284, Length=317, Percent_Identity=25.8675078864353, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI75709208, Length=321, Percent_Identity=25.5451713395639, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI32528286, Length=319, Percent_Identity=26.0188087774295, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI32528282, Length=316, Percent_Identity=25.9493670886076, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI18640736, Length=323, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22165400, Length=234, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI22165355, Length=237, Percent_Identity=28.6919831223629, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 37335; Mature: 37335

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYISMVSIRDTEVTLLEMVQPFDANSIGRLFGGRILEWIANVGTVATVKFSRGPTVLA
CEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEE
YMDRHFFLAPAFIGDSITLKARVEYVGRSSMETYIEAVRRHGGDQVIMTMTTAAYVAVDD
EECCCEEEEHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECC
YGQPRLIRNELKPNPDELMIYNNARSRYEARKSKIVNRREERYNVNDPTENLRWRVESNR
CCCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
WVTPQDAFMSNMVSAGRLLAWIDNIAASLASEYAKSVVVTGSIDDTVFYSPIRTGEIVKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEECCCCCCCEEEE
AVGISYVGKTSLETLIHVTTEDAYGNVKRVCTAYYTYIAIDDKGKPQPVPQYQPANDYER
EEEHHHCCCHHHHHEEEEECCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHH
KLFEEGARRKMLRDEEIKRLKESMIIK
HHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYYISMVSIRDTEVTLLEMVQPFDANSIGRLFGGRILEWIANVGTVATVKFSRGPTVLA
CEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEE
YMDRHFFLAPAFIGDSITLKARVEYVGRSSMETYIEAVRRHGGDQVIMTMTTAAYVAVDD
EECCCEEEEHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECC
YGQPRLIRNELKPNPDELMIYNNARSRYEARKSKIVNRREERYNVNDPTENLRWRVESNR
CCCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
WVTPQDAFMSNMVSAGRLLAWIDNIAASLASEYAKSVVVTGSIDDTVFYSPIRTGEIVKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEECCCCCCCEEEE
AVGISYVGKTSLETLIHVTTEDAYGNVKRVCTAYYTYIAIDDKGKPQPVPQYQPANDYER
EEEHHHCCCHHHHHEEEEECCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHH
KLFEEGARRKMLRDEEIKRLKESMIIK
HHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]