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The map label for this gene is pqqE [H]

Identifier: 159041188

GI number: 159041188

Start: 642848

End: 644002

Strand: Reverse

Name: pqqE [H]

Synonym: Cmaq_0609

Alternate gene names: 159041188

Gene position: 644002-642848 (Counterclockwise)

Preceding gene: 159041189

Following gene: 159041187

Centisome position: 31.0

GC content: 43.81

Gene sequence:

>1155_bases
TTGACCAGTGAATTAATTAAGGATATGGGGTTAATCTTCCTCACAGAGTGCCCTGCAACACCATTAACTCACATCCTGGC
GCTTAATACCGGAGACTACACTGAGAGTCTTGTTAAGTCACTTGGTTCAGGTAATCCAGTGGATGCCACCCTTTACTTAA
CCAGGGCATGCAACCTCAGGTGCGCTACCTGTTACGTATCAGCCTCAAAACCATTACCCAATGAACTTAATGCTGGTGAA
TGGATAAGGGTTGTGGATGAGTTGGGTAAATTGGGGGTAAGGTACCTTTACTTACTTGGAGGTGAACCCCTCCTTCTACT
TAATAGGGGTTTACTAGACATAGTTAAGAGGGGTAAGGAGAATGGTATGATTGTTTCCCTAAGCACTAATGGAACCTTAG
TAAGCGAGGAGGCTGCAGTTAAGTTAAGGGATTCAGGGGTGGATCAGGTTCAAGTGAGTCTTGATGGGCCTAATCCAGTG
ATTAATGATGCTATTAGGGGTCATGGATCCTTCAGTAAAGCCATAAACGCTATTAAGTACCTTAAGGATGCTGGGGTAAC
GGTATCATTATCGTACACGGTCACAATCAGTAATGCTGATTACGTAAAGGACTTCGTTAAACTAGCCTCCGATTTAAAGA
TTCCTGTGGTAACCTTCATTAGGGTTCAGGAATTCGGTAGGGCTAGCGGAGGGGGCTTAGGTATTAGTAATGAATTAGCC
CATGAGGTTTTAATTAAGTTAAGTGAATTAAGTGATGTTAATGTTAAGGTAGTGTACAGTGGCTTTAGGTTCGGGTTACT
GAACCTTATGAGTAAAGCTTACCGTGAGACTGAGGGGTTACTTAATGGGCTTAAGGTGGTTAACTATGGTACATGCCCAG
CAGGTAGGAGTAGGCTTGTGATTGACTCCAATGGTGATATTTACGGTTGCGAATTATTAATGCGACCGGAGTTTAGGGAA
GGTAATGTTAGGCGGGATGAGTTGAGTAAGGTGTGGGTAAGTGGGTTCAAGGCCTTTAGAAACAGAGTACCCAGTCCATT
ATGTCTTACATGCCCATTCTTTAAAATATGCCGGGGAGGGTGCCCAGCTAGGGTTTACGCTAAGTATGGTTCATTAAATG
GCCCTGACCCACAATGCACATTAATGAACAGCTAG

Upstream 100 bases:

>100_bases
TTATCAGTATATTCATTTATTAATACATTTATTAAAGTAAAGTTGCAAAATATTTTTTAACCGGAATGTTATTAAAAACA
GTTGAGATAGGTGAATTAAC

Downstream 100 bases:

>100_bases
GTGTTAAGCTTAATAAGGGTTGGTAAGCGGGGATGTAGAATATGATTGTATTACCACCATTACAGTACAGTATAATTAAA
GTGCTGGTTGAGGTTAATGA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTSELIKDMGLIFLTECPATPLTHILALNTGDYTESLVKSLGSGNPVDATLYLTRACNLRCATCYVSASKPLPNELNAGE
WIRVVDELGKLGVRYLYLLGGEPLLLLNRGLLDIVKRGKENGMIVSLSTNGTLVSEEAAVKLRDSGVDQVQVSLDGPNPV
INDAIRGHGSFSKAINAIKYLKDAGVTVSLSYTVTISNADYVKDFVKLASDLKIPVVTFIRVQEFGRASGGGLGISNELA
HEVLIKLSELSDVNVKVVYSGFRFGLLNLMSKAYRETEGLLNGLKVVNYGTCPAGRSRLVIDSNGDIYGCELLMRPEFRE
GNVRRDELSKVWVSGFKAFRNRVPSPLCLTCPFFKICRGGCPARVYAKYGSLNGPDPQCTLMNS

Sequences:

>Translated_384_residues
MTSELIKDMGLIFLTECPATPLTHILALNTGDYTESLVKSLGSGNPVDATLYLTRACNLRCATCYVSASKPLPNELNAGE
WIRVVDELGKLGVRYLYLLGGEPLLLLNRGLLDIVKRGKENGMIVSLSTNGTLVSEEAAVKLRDSGVDQVQVSLDGPNPV
INDAIRGHGSFSKAINAIKYLKDAGVTVSLSYTVTISNADYVKDFVKLASDLKIPVVTFIRVQEFGRASGGGLGISNELA
HEVLIKLSELSDVNVKVVYSGFRFGLLNLMSKAYRETEGLLNGLKVVNYGTCPAGRSRLVIDSNGDIYGCELLMRPEFRE
GNVRRDELSKVWVSGFKAFRNRVPSPLCLTCPFFKICRGGCPARVYAKYGSLNGPDPQCTLMNS
>Mature_383_residues
TSELIKDMGLIFLTECPATPLTHILALNTGDYTESLVKSLGSGNPVDATLYLTRACNLRCATCYVSASKPLPNELNAGEW
IRVVDELGKLGVRYLYLLGGEPLLLLNRGLLDIVKRGKENGMIVSLSTNGTLVSEEAAVKLRDSGVDQVQVSLDGPNPVI
NDAIRGHGSFSKAINAIKYLKDAGVTVSLSYTVTISNADYVKDFVKLASDLKIPVVTFIRVQEFGRASGGGLGISNELAH
EVLIKLSELSDVNVKVVYSGFRFGLLNLMSKAYRETEGLLNGLKVVNYGTCPAGRSRLVIDSNGDIYGCELLMRPEFREG
NVRRDELSKVWVSGFKAFRNRVPSPLCLTCPFFKICRGGCPARVYAKYGSLNGPDPQCTLMNS

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

Organism=Escherichia coli, GI87081923, Length=328, Percent_Identity=24.6951219512195, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41716; Mature: 41585

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSELIKDMGLIFLTECPATPLTHILALNTGDYTESLVKSLGSGNPVDATLYLTRACNLR
CCHHHHHHCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEECCCCE
CATCYVSASKPLPNELNAGEWIRVVDELGKLGVRYLYLLGGEPLLLLNRGLLDIVKRGKE
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCEEEEECCCHHHHHHCCCC
NGMIVSLSTNGTLVSEEAAVKLRDSGVDQVQVSLDGPNPVINDAIRGHGSFSKAINAIKY
CCEEEEEECCCEEEECCCEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHH
LKDAGVTVSLSYTVTISNADYVKDFVKLASDLKIPVVTFIRVQEFGRASGGGLGISNELA
HHHCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHEEHHHHCCCCCCCCCCCHHHH
HEVLIKLSELSDVNVKVVYSGFRFGLLNLMSKAYRETEGLLNGLKVVNYGTCPAGRSRLV
HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEE
IDSNGDIYGCELLMRPEFREGNVRRDELSKVWVSGFKAFRNRVPSPLCLTCPFFKICRGG
EECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCC
CPARVYAKYGSLNGPDPQCTLMNS
CCCEEHEECCCCCCCCCCEEECCC
>Mature Secondary Structure 
TSELIKDMGLIFLTECPATPLTHILALNTGDYTESLVKSLGSGNPVDATLYLTRACNLR
CHHHHHHCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEECCCCE
CATCYVSASKPLPNELNAGEWIRVVDELGKLGVRYLYLLGGEPLLLLNRGLLDIVKRGKE
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCEEEEECCCHHHHHHCCCC
NGMIVSLSTNGTLVSEEAAVKLRDSGVDQVQVSLDGPNPVINDAIRGHGSFSKAINAIKY
CCEEEEEECCCEEEECCCEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHH
LKDAGVTVSLSYTVTISNADYVKDFVKLASDLKIPVVTFIRVQEFGRASGGGLGISNELA
HHHCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHEEHHHHCCCCCCCCCCCHHHH
HEVLIKLSELSDVNVKVVYSGFRFGLLNLMSKAYRETEGLLNGLKVVNYGTCPAGRSRLV
HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEE
IDSNGDIYGCELLMRPEFREGNVRRDELSKVWVSGFKAFRNRVPSPLCLTCPFFKICRGG
EECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCC
CPARVYAKYGSLNGPDPQCTLMNS
CCCEEHEECCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA