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The map label for this gene is ybcL [C]

Identifier: 159041120

GI number: 159041120

Start: 572075

End: 572656

Strand: Reverse

Name: ybcL [C]

Synonym: Cmaq_0538

Alternate gene names: 159041120

Gene position: 572656-572075 (Counterclockwise)

Preceding gene: 159041122

Following gene: 159041115

Centisome position: 27.56

GC content: 42.61

Gene sequence:

>582_bases
ATGAGGATAAAGCCCTCGTATATAATAACTACGGTAATACTGGTGATAATAATGGTGGCGTTAGTAGTAATAATGACCCT
TAGCGGGGGCTCTGGTGGTGGGGTTACTGTATATGAGCCTAATCTAGGCTTAGGGGGCTTCAGCATTAAGGTACCTATCT
ACGGTAATGAATCAACAATACCCAGTTCATACGCCTGCAACGGGGTTAACTTCACATCATCACCCCCTTTAATCATAAGT
AACATTCCCTCAGGCACTAGGTCACTCATGGTTGTTATGATTGATGTCGACGCCAACATGTTCATACACTGGGCCCTAGT
AAACGCGCCACCAGTATCATTAATACCCCCTAACCTACCTCACTCATTTAACACTAGTTTCGGTGAACAGTTGATTAATG
ACTTCGGTAACGTGGGCTTCAATGGACCTTGCCCACCCAGCAGGCACATGTACATTATAATAGTTTACGCATTAAACTCA
ACGATTAATGTTAAGGATGGTAAATACACTTACGCTCAATTAGTAAGTATGATTAAGAATCATGTATTGGCCACAGCCCT
ATGGATTGGTTACTACGGTTAG

Upstream 100 bases:

>100_bases
CGCTGTAGCTCAGCCTCCTTCACGCATTACTGATTACTGTGGGGATTAATAAATCGTTCTAGGATAAGGTATTAAAAACA
GCACCGGGTTAAAGATTAGG

Downstream 100 bases:

>100_bases
GCGGAGGTAATGTGCTAGTGAATGATTAAGCATTATATAGTACGTTTAAGCCACACCCTTAATAATGCGTAATCAATTAT
GATTATGCTCACAACGGTTA

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRIKPSYIITTVILVIIMVALVVIMTLSGGSGGGVTVYEPNLGLGGFSIKVPIYGNESTIPSSYACNGVNFTSSPPLIIS
NIPSGTRSLMVVMIDVDANMFIHWALVNAPPVSLIPPNLPHSFNTSFGEQLINDFGNVGFNGPCPPSRHMYIIIVYALNS
TINVKDGKYTYAQLVSMIKNHVLATALWIGYYG

Sequences:

>Translated_193_residues
MRIKPSYIITTVILVIIMVALVVIMTLSGGSGGGVTVYEPNLGLGGFSIKVPIYGNESTIPSSYACNGVNFTSSPPLIIS
NIPSGTRSLMVVMIDVDANMFIHWALVNAPPVSLIPPNLPHSFNTSFGEQLINDFGNVGFNGPCPPSRHMYIIIVYALNS
TINVKDGKYTYAQLVSMIKNHVLATALWIGYYG
>Mature_193_residues
MRIKPSYIITTVILVIIMVALVVIMTLSGGSGGGVTVYEPNLGLGGFSIKVPIYGNESTIPSSYACNGVNFTSSPPLIIS
NIPSGTRSLMVVMIDVDANMFIHWALVNAPPVSLIPPNLPHSFNTSFGEQLINDFGNVGFNGPCPPSRHMYIIIVYALNS
TINVKDGKYTYAQLVSMIKNHVLATALWIGYYG

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=135, Percent_Identity=34.0740740740741, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20769; Mature: 20769

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKPSYIITTVILVIIMVALVVIMTLSGGSGGGVTVYEPNLGLGGFSIKVPIYGNESTI
CCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCEEEEEEEECCCCCC
PSSYACNGVNFTSSPPLIISNIPSGTRSLMVVMIDVDANMFIHWALVNAPPVSLIPPNLP
CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCC
HSFNTSFGEQLINDFGNVGFNGPCPPSRHMYIIIVYALNSTINVKDGKYTYAQLVSMIKN
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCHHHHHHHHHHH
HVLATALWIGYYG
HHHHHHHEEECCC
>Mature Secondary Structure
MRIKPSYIITTVILVIIMVALVVIMTLSGGSGGGVTVYEPNLGLGGFSIKVPIYGNESTI
CCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCEEEEEEEECCCCCC
PSSYACNGVNFTSSPPLIISNIPSGTRSLMVVMIDVDANMFIHWALVNAPPVSLIPPNLP
CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCC
HSFNTSFGEQLINDFGNVGFNGPCPPSRHMYIIIVYALNSTINVKDGKYTYAQLVSMIKN
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCHHHHHHHHHHH
HVLATALWIGYYG
HHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]