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The map label for this gene is dcd

Identifier: 159041108

GI number: 159041108

Start: 557953

End: 558492

Strand: Reverse

Name: dcd

Synonym: Cmaq_0525

Alternate gene names: 159041108

Gene position: 558492-557953 (Counterclockwise)

Preceding gene: 159041110

Following gene: 159041105

Centisome position: 26.88

GC content: 45.56

Gene sequence:

>540_bases
ATGATACTTGCCAGGGGAGAGATACTTAAGCTTATTAAGGATGGTTCCTTAGGTATTGAACCCTTCACTGAGGATGTTGT
TAGGGAGAATGGCCTCGACTTAAGGGTTGGTAACGAGTACGCAATATACGCCTTCGAGAACCAGGTAATTGATCCATGTG
AGCTTGAATCCACTAGGCACTTATTCAGTATTGTGGAGGCTAAGGACGGTAGAATAATAATACCACCCAGGAGTTTCGCC
TTACTGACAACTATGGAGTACGTTAAATTCCCAAGGGATGTAATAGGCTTCTGCAACCTACGCTCAACCCTAGCCAGATA
CGGCCTAGGGGTACCACCCACAATAATAGATACTGGGTTTGAGGGTAACATAACCATTGAGGTCATTAACAATAGTGGAA
ACTATGTGGTTCTTAGACCAGGTATGAGGTTCCTCCACGTGGTTCTCGCTAAAACCATAGGTGAAGCCAAGTACCAGGGC
AAGTACCTTGGGCAAAGAGGCGTAACACCACCTAAGGGGCTTAAGGGTGAATGCAGTTAA

Upstream 100 bases:

>100_bases
TAGTGGAGTTAACCATGATTAATCTATTACTCTTAGTGCTTTTAACATTAAGCTCACGTTGAGTAATAGCTTTTAATAAC
CTACCAGTTAAGGTGCATTA

Downstream 100 bases:

>100_bases
GTACCTACCTCCTCTTAGCTACAGCCAGTACTAGTGGGAAGGATTTCTTAATATTAAGCGTGAAGTACGGTGATAGGGTG
TTGTTAATGCATTTAACGGT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MILARGEILKLIKDGSLGIEPFTEDVVRENGLDLRVGNEYAIYAFENQVIDPCELESTRHLFSIVEAKDGRIIIPPRSFA
LLTTMEYVKFPRDVIGFCNLRSTLARYGLGVPPTIIDTGFEGNITIEVINNSGNYVVLRPGMRFLHVVLAKTIGEAKYQG
KYLGQRGVTPPKGLKGECS

Sequences:

>Translated_179_residues
MILARGEILKLIKDGSLGIEPFTEDVVRENGLDLRVGNEYAIYAFENQVIDPCELESTRHLFSIVEAKDGRIIIPPRSFA
LLTTMEYVKFPRDVIGFCNLRSTLARYGLGVPPTIIDTGFEGNITIEVINNSGNYVVLRPGMRFLHVVLAKTIGEAKYQG
KYLGQRGVTPPKGLKGECS
>Mature_179_residues
MILARGEILKLIKDGSLGIEPFTEDVVRENGLDLRVGNEYAIYAFENQVIDPCELESTRHLFSIVEAKDGRIIIPPRSFA
LLTTMEYVKFPRDVIGFCNLRSTLARYGLGVPPTIIDTGFEGNITIEVINNSGNYVVLRPGMRFLHVVLAKTIGEAKYQG
KYLGQRGVTPPKGLKGECS

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_CALMQ (A8MC64)

Other databases:

- EMBL:   CP000852
- RefSeq:   YP_001540360.1
- ProteinModelPortal:   A8MC64
- SMR:   A8MC64
- GeneID:   5709628
- GenomeReviews:   CP000852_GR
- KEGG:   cma:Cmaq_0525
- HOGENOM:   HBG553199
- OMA:   GSFAWVD
- ProtClustDB:   PRK00416
- BioCyc:   CMAQ397948:CMAQ_0525-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 19846; Mature: 19846

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILARGEILKLIKDGSLGIEPFTEDVVRENGLDLRVGNEYAIYAFENQVIDPCELESTRH
CEECCHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCEEEEEEECCCCCCCCCCHHHHH
LFSIVEAKDGRIIIPPRSFALLTTMEYVKFPRDVIGFCNLRSTLARYGLGVPPTIIDTGF
HHHHEECCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCC
EGNITIEVINNSGNYVVLRPGMRFLHVVLAKTIGEAKYQGKYLGQRGVTPPKGLKGECS
CCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILARGEILKLIKDGSLGIEPFTEDVVRENGLDLRVGNEYAIYAFENQVIDPCELESTRH
CEECCHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCEEEEEEECCCCCCCCCCHHHHH
LFSIVEAKDGRIIIPPRSFALLTTMEYVKFPRDVIGFCNLRSTLARYGLGVPPTIIDTGF
HHHHEECCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCC
EGNITIEVINNSGNYVVLRPGMRFLHVVLAKTIGEAKYQGKYLGQRGVTPPKGLKGECS
CCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA