| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is wtpA [H]
Identifier: 159041090
GI number: 159041090
Start: 542945
End: 544126
Strand: Reverse
Name: wtpA [H]
Synonym: Cmaq_0507
Alternate gene names: 159041090
Gene position: 544126-542945 (Counterclockwise)
Preceding gene: 159041091
Following gene: 159041089
Centisome position: 26.19
GC content: 43.32
Gene sequence:
>1182_bases ATGGCATCAAACTCAATACTAGCCACAGCCGTAGTTGTGGCTTTAATAGTGGGTATTGCCGCTGGATATGGAGTCGCCTC AACACATGTAAGTAAAGTAACCACGACGTTAACCTCAACAATAACAGTTACAACAACGACCACTTCACCAGTAACGGTTA CTGCAACCTATGCTTCATCACTTAGCCAACCCTTCGTAGTTGGTGCCGCTGGAACATTGAAGTTCGCCTTCACTGATTTA CTAAACATAATGAAGAGCATGTACCCTAACTTAAACATAGGTCAACCATACTTCAAGGGTAGTGGCGACGTGGCTCAGTA TGAGCTTGATACGAATCAACTCAGCATAATGGCCTCAGCGGACACCACAACAATACCATCAGTGCTCTTCGCTCATAATT ACACTGATTATGAGATTGCCTTCGGTGTAACTCAAATGGTTATTATAGTTGATTTAAATACAACAGCTGGACAGGAGGTT TATAGGCTTTGGCAGGAGGCGCAGAGTTACCCACCTTTATCAACTCAGTGGAACAACACTTGGAGGGAGATATTCACTAT AATAGCCTTAAACTCAAGCACCGTGGTGGGTGTCTCAAACCCATTCACTGATCCGTCAGGTTACCAAGCGCAGTGCATGA TTAAGTTAGCTGGCTTAACATTCTTCAACAATGCCTCATATCTATATGACGCTATTTACAGTAATCCAAGCAAGTACTTC ATGAGGAATACTGAGGTGGATTTATTCACGTTAATGGATGCCGGCCAGGTTCAATTCATACTATCAGCTTACTTAAGTAA TGCAATACCGCAGACCCAGGAGTATAAGGGGACAGCCTACATTACATTACCCTTCATGATTAACCTAGGTAACTTAAGCT ACGTACCCTACTACCACCAGGTTAATACAACCTGGACTGAGGTAGGTGTCACTAAAACCTTCAAATGCAACCCAGTGGTT TACACGATAACTATACCCAATAATGCACCTAATCCAACAGCCGCATTATACTTCCTAACACTACTCTACAGTCCAATAGG GCAGAAGATACTTGAGGAGAATGGTATTCAACCAATAGTGCCGGGTATAGTGTACGGTAACTACAGTAATGTACCAGCCA TCTTAAGACCATTCACGGCACCAGTCAGCCAGTACCCGCAGTATGCTCCAATATTCCCATAA
Upstream 100 bases:
>100_bases TTGTTTGGAGTAATGCACCGAGGAGTATTAGGGAGAAGATGTATTTGCTGTTGATTTCATAGGGTAAAATTTTTAAGCAT TATTATTTTACGGATAACGC
Downstream 100 bases:
>100_bases GCCTGAGCTGCTTAGTTAACTTTAAACCCCTATTAAAATAATGACTTTTAGGTGCCTTTAATATGGTTTACATGGGTGAG CTTCCCCTTAAAGTAGCCTT
Product: molybdate ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MASNSILATAVVVALIVGIAAGYGVASTHVSKVTTTLTSTITVTTTTTSPVTVTATYASSLSQPFVVGAAGTLKFAFTDL LNIMKSMYPNLNIGQPYFKGSGDVAQYELDTNQLSIMASADTTTIPSVLFAHNYTDYEIAFGVTQMVIIVDLNTTAGQEV YRLWQEAQSYPPLSTQWNNTWREIFTIIALNSSTVVGVSNPFTDPSGYQAQCMIKLAGLTFFNNASYLYDAIYSNPSKYF MRNTEVDLFTLMDAGQVQFILSAYLSNAIPQTQEYKGTAYITLPFMINLGNLSYVPYYHQVNTTWTEVGVTKTFKCNPVV YTITIPNNAPNPTAALYFLTLLYSPIGQKILEENGIQPIVPGIVYGNYSNVPAILRPFTAPVSQYPQYAPIFP
Sequences:
>Translated_393_residues MASNSILATAVVVALIVGIAAGYGVASTHVSKVTTTLTSTITVTTTTTSPVTVTATYASSLSQPFVVGAAGTLKFAFTDL LNIMKSMYPNLNIGQPYFKGSGDVAQYELDTNQLSIMASADTTTIPSVLFAHNYTDYEIAFGVTQMVIIVDLNTTAGQEV YRLWQEAQSYPPLSTQWNNTWREIFTIIALNSSTVVGVSNPFTDPSGYQAQCMIKLAGLTFFNNASYLYDAIYSNPSKYF MRNTEVDLFTLMDAGQVQFILSAYLSNAIPQTQEYKGTAYITLPFMINLGNLSYVPYYHQVNTTWTEVGVTKTFKCNPVV YTITIPNNAPNPTAALYFLTLLYSPIGQKILEENGIQPIVPGIVYGNYSNVPAILRPFTAPVSQYPQYAPIFP >Mature_392_residues ASNSILATAVVVALIVGIAAGYGVASTHVSKVTTTLTSTITVTTTTTSPVTVTATYASSLSQPFVVGAAGTLKFAFTDLL NIMKSMYPNLNIGQPYFKGSGDVAQYELDTNQLSIMASADTTTIPSVLFAHNYTDYEIAFGVTQMVIIVDLNTTAGQEVY RLWQEAQSYPPLSTQWNNTWREIFTIIALNSSTVVGVSNPFTDPSGYQAQCMIKLAGLTFFNNASYLYDAIYSNPSKYFM RNTEVDLFTLMDAGQVQFILSAYLSNAIPQTQEYKGTAYITLPFMINLGNLSYVPYYHQVNTTWTEVGVTKTFKCNPVVY TITIPNNAPNPTAALYFLTLLYSPIGQKILEENGIQPIVPGIVYGNYSNVPAILRPFTAPVSQYPQYAPIFP
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Binds tungstate and molybdate, with a preference for tungstate [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022498 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 42972; Mature: 42841
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNSILATAVVVALIVGIAAGYGVASTHVSKVTTTLTSTITVTTTTTSPVTVTATYASS CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEEEECCCCEEEEEEEHHC LSQPFVVGAAGTLKFAFTDLLNIMKSMYPNLNIGQPYFKGSGDVAQYELDTNQLSIMASA CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC DTTTIPSVLFAHNYTDYEIAFGVTQMVIIVDLNTTAGQEVYRLWQEAQSYPPLSTQWNNT CCCCCCHHHHHCCCCCEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHH WREIFTIIALNSSTVVGVSNPFTDPSGYQAQCMIKLAGLTFFNNASYLYDAIYSNPSKYF HHEEEEEEEECCCEEEECCCCCCCCCCCCEEEEEEEECEEEECCCHHHHHHHHCCCHHHE MRNTEVDLFTLMDAGQVQFILSAYLSNAIPQTQEYKGTAYITLPFMINLGNLSYVPYYHQ EECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCEEECEEEEE VNTTWTEVGVTKTFKCNPVVYTITIPNNAPNPTAALYFLTLLYSPIGQKILEENGIQPIV CCCEEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGIVYGNYSNVPAILRPFTAPVSQYPQYAPIFP CEEEECCCCCCCHHHCCCCCCHHHCCCCCCCCC >Mature Secondary Structure ASNSILATAVVVALIVGIAAGYGVASTHVSKVTTTLTSTITVTTTTTSPVTVTATYASS CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEEEECCCCEEEEEEEHHC LSQPFVVGAAGTLKFAFTDLLNIMKSMYPNLNIGQPYFKGSGDVAQYELDTNQLSIMASA CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC DTTTIPSVLFAHNYTDYEIAFGVTQMVIIVDLNTTAGQEVYRLWQEAQSYPPLSTQWNNT CCCCCCHHHHHCCCCCEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHH WREIFTIIALNSSTVVGVSNPFTDPSGYQAQCMIKLAGLTFFNNASYLYDAIYSNPSKYF HHEEEEEEEECCCEEEECCCCCCCCCCCCEEEEEEEECEEEECCCHHHHHHHHCCCHHHE MRNTEVDLFTLMDAGQVQFILSAYLSNAIPQTQEYKGTAYITLPFMINLGNLSYVPYYHQ EECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCEEECEEEEE VNTTWTEVGVTKTFKCNPVVYTITIPNNAPNPTAALYFLTLLYSPIGQKILEENGIQPIV CCCEEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGIVYGNYSNVPAILRPFTAPVSQYPQYAPIFP CEEEECCCCCCCHHHCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA