Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is yhjX [C]

Identifier: 159041087

GI number: 159041087

Start: 539752

End: 540891

Strand: Reverse

Name: yhjX [C]

Synonym: Cmaq_0504

Alternate gene names: 159041087

Gene position: 540891-539752 (Counterclockwise)

Preceding gene: 159041088

Following gene: 159041086

Centisome position: 26.03

GC content: 43.68

Gene sequence:

>1140_bases
ATGAGGAACTGGTTCATAATAATCCAAGGACTATTACCAATGATGCTTATATCAGCCTACCAATACAGCTGGAACCTACT
CATAACACCATTAATGAGGAGTCTCAACGTTGATTTACCTGCAATTCAAGTAGCCTACTCATTATTCGTCCTATTCTCCA
CTATTTCACAGGTACTTGGGGGTTACATTGCTGATAGGAGAGGGCCTAGATTAGTTGGCGTAACCGGTGGTGTATTGGCT
GGCTTAGGTATGGTGGCTTCACCACTTGTTAATGGGGTTAATCAATTCTACGCCCTGTGGTCAATGGGGAGCATTGGCGT
TGGCTTAATCTACGGTGTATCAATAAACCTGGGGGTTAAGTGGTTTAGTAGGACTAGGGGCTTAGCCACAGGTATAATAA
ACATGGGCTTTGGACTTGGGGCGACATTCTTCAACCCGTTAATATCGCTATTAATTATTAAGGGTGAGTACAGGTACCCG
ATGATGCTTATAGGCGCATTAATACTGGCCGTAGTCATACCCTTAATGGCGACGGCCAAGTACCCTCCAAGCCAGGTTAA
GGCTATGAGGCTTACTAAAATACCCCCAGGCTTCTGGCTTGTCTTCGCATCATTCTCACTAATGGGTATTCCACTTCAAT
TACTCTCCTCCAGTCTCTCAATACTGGGTGAGGGTTACGGTTACATTATAGTTGCCACTGCGGCGTCACTACTTCCCCTA
TTCAGTGGTATTGGTAGGCCAATAATGGGTTCAATATCAGATAAGTTAAGTAGGAGGAAGACTATTCTCGTAACTGGTGT
CGCCTTAACGGTCTCAATGCTCACTCTGCTTATTCACTCACCCATAGCTTACATGGCCTCAACAGTAATTACAGGTATTT
TCGGGGGTTCGGTGATAACGTTATTCGCATCCCTTGTGGGTGATGAATACGGTACAGTTAACTCAACCTTCCTATTCGGT
ATACTTTACAATGGTAAATTCGTATCAGCCCTAATAAGTAGTGTAGTATTCGCTGAACTACTGAGGACCATTAATTTAAC
TAACTCCCTTATAATTGAGGCTTTCCTAACAGCCGTATCAATACTAGTATTCATGGTCTTCACCAGGGTTAAGTCTAGGA
GGCAGGTGGCTATTATTTGA

Upstream 100 bases:

>100_bases
AGGGTGATTCCCTTACCCTAACCATACCACCCAACCTGATTCACCTAATACCGGCTGTTGAGTGAATACTGTTTAATAGG
GTTAGGCTGGGGTTTTAACA

Downstream 100 bases:

>100_bases
AAAACACTTAATAATGCGCCTTCACGGGTCCTGTATGGACTCTAGCAAGGTATTAAATATTGCTGGTTACGTTGCCTTAA
CAGTAATCTTAATTTACCTA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRNWFIIIQGLLPMMLISAYQYSWNLLITPLMRSLNVDLPAIQVAYSLFVLFSTISQVLGGYIADRRGPRLVGVTGGVLA
GLGMVASPLVNGVNQFYALWSMGSIGVGLIYGVSINLGVKWFSRTRGLATGIINMGFGLGATFFNPLISLLIIKGEYRYP
MMLIGALILAVVIPLMATAKYPPSQVKAMRLTKIPPGFWLVFASFSLMGIPLQLLSSSLSILGEGYGYIIVATAASLLPL
FSGIGRPIMGSISDKLSRRKTILVTGVALTVSMLTLLIHSPIAYMASTVITGIFGGSVITLFASLVGDEYGTVNSTFLFG
ILYNGKFVSALISSVVFAELLRTINLTNSLIIEAFLTAVSILVFMVFTRVKSRRQVAII

Sequences:

>Translated_379_residues
MRNWFIIIQGLLPMMLISAYQYSWNLLITPLMRSLNVDLPAIQVAYSLFVLFSTISQVLGGYIADRRGPRLVGVTGGVLA
GLGMVASPLVNGVNQFYALWSMGSIGVGLIYGVSINLGVKWFSRTRGLATGIINMGFGLGATFFNPLISLLIIKGEYRYP
MMLIGALILAVVIPLMATAKYPPSQVKAMRLTKIPPGFWLVFASFSLMGIPLQLLSSSLSILGEGYGYIIVATAASLLPL
FSGIGRPIMGSISDKLSRRKTILVTGVALTVSMLTLLIHSPIAYMASTVITGIFGGSVITLFASLVGDEYGTVNSTFLFG
ILYNGKFVSALISSVVFAELLRTINLTNSLIIEAFLTAVSILVFMVFTRVKSRRQVAII
>Mature_379_residues
MRNWFIIIQGLLPMMLISAYQYSWNLLITPLMRSLNVDLPAIQVAYSLFVLFSTISQVLGGYIADRRGPRLVGVTGGVLA
GLGMVASPLVNGVNQFYALWSMGSIGVGLIYGVSINLGVKWFSRTRGLATGIINMGFGLGATFFNPLISLLIIKGEYRYP
MMLIGALILAVVIPLMATAKYPPSQVKAMRLTKIPPGFWLVFASFSLMGIPLQLLSSSLSILGEGYGYIIVATAASLLPL
FSGIGRPIMGSISDKLSRRKTILVTGVALTVSMLTLLIHSPIAYMASTVITGIFGGSVITLFASLVGDEYGTVNSTFLFG
ILYNGKFVSALISSVVFAELLRTINLTNSLIIEAFLTAVSILVFMVFTRVKSRRQVAII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789969, Length=345, Percent_Identity=25.7971014492754, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40849; Mature: 40849

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNWFIIIQGLLPMMLISAYQYSWNLLITPLMRSLNVDLPAIQVAYSLFVLFSTISQVLG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GYIADRRGPRLVGVTGGVLAGLGMVASPLVNGVNQFYALWSMGSIGVGLIYGVSINLGVK
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCHH
WFSRTRGLATGIINMGFGLGATFFNPLISLLIIKGEYRYPMMLIGALILAVVIPLMATAK
HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
YPPSQVKAMRLTKIPPGFWLVFASFSLMGIPLQLLSSSLSILGEGYGYIIVATAASLLPL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
FSGIGRPIMGSISDKLSRRKTILVTGVALTVSMLTLLIHSPIAYMASTVITGIFGGSVIT
HHHCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LFASLVGDEYGTVNSTFLFGILYNGKFVSALISSVVFAELLRTINLTNSLIIEAFLTAVS
HHHHHHCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVFMVFTRVKSRRQVAII
HHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MRNWFIIIQGLLPMMLISAYQYSWNLLITPLMRSLNVDLPAIQVAYSLFVLFSTISQVLG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GYIADRRGPRLVGVTGGVLAGLGMVASPLVNGVNQFYALWSMGSIGVGLIYGVSINLGVK
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCHH
WFSRTRGLATGIINMGFGLGATFFNPLISLLIIKGEYRYPMMLIGALILAVVIPLMATAK
HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
YPPSQVKAMRLTKIPPGFWLVFASFSLMGIPLQLLSSSLSILGEGYGYIIVATAASLLPL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
FSGIGRPIMGSISDKLSRRKTILVTGVALTVSMLTLLIHSPIAYMASTVITGIFGGSVIT
HHHCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LFASLVGDEYGTVNSTFLFGILYNGKFVSALISSVVFAELLRTINLTNSLIIEAFLTAVS
HHHHHHCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVFMVFTRVKSRRQVAII
HHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2439991 [H]