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The map label for this gene is 159041029

Identifier: 159041029

GI number: 159041029

Start: 480598

End: 481053

Strand: Reverse

Name: 159041029

Synonym: Cmaq_0446

Alternate gene names: NA

Gene position: 481053-480598 (Counterclockwise)

Preceding gene: 159041031

Following gene: 159041028

Centisome position: 23.15

GC content: 41.01

Gene sequence:

>456_bases
ATGGAGGTTCAGATTGTTAAGGAGGAGCAGCAGGTAGTTAATAACCCACCCAACATAGGTAGGGAAATCACTGAACTTGA
GAAATCCCTGAGGAGGATAATAAGTAGTCTAGTAGTCACAGGTAGTAAGGATATTGATAGGGAACCACCCATAGATATAT
ATGAGGATGGGGATAAGGTTATAGTGCTCTTCGACATGCCTGGTGTACGTAAGGAGCAGATTAAGCTTAGAATTGGTATG
AATTACATTGAGGTTAATGTTGAACCCACCGCCTATATTGCCACTGGGAAACCAGTACTGCTTGAGAGGTTTAGTAACTA
TAAGCTACATAGGAGGGTTGAGTTACCGTTTAACGTGAAGCTTGATGACGTTAAGGCGTATTATAAGGATGGTGTACTTC
AGGTTCACTTAACTAAACTACCAGGTTATAATACAGCTGAGGTCGCTATTGAATAA

Upstream 100 bases:

>100_bases
TTTACTTATATTAAAAACTTACACCTAAATATTACACATTACACCACAGCGCCCTATTTTAAACGAGGAGGTTATTACCA
CCACTGTTTAAATAAACATT

Downstream 100 bases:

>100_bases
TCAATACTATTATAGAGTTAATACTCATTGATTTAAACCAGTACTTTAATACCGTTAACAAAGCCCTATGAGCATATTTA
TTTTGCTTAAACCTTTAAAA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: Small Heat Shock Protein

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MEVQIVKEEQQVVNNPPNIGREITELEKSLRRIISSLVVTGSKDIDREPPIDIYEDGDKVIVLFDMPGVRKEQIKLRIGM
NYIEVNVEPTAYIATGKPVLLERFSNYKLHRRVELPFNVKLDDVKAYYKDGVLQVHLTKLPGYNTAEVAIE

Sequences:

>Translated_151_residues
MEVQIVKEEQQVVNNPPNIGREITELEKSLRRIISSLVVTGSKDIDREPPIDIYEDGDKVIVLFDMPGVRKEQIKLRIGM
NYIEVNVEPTAYIATGKPVLLERFSNYKLHRRVELPFNVKLDDVKAYYKDGVLQVHLTKLPGYNTAEVAIE
>Mature_151_residues
MEVQIVKEEQQVVNNPPNIGREITELEKSLRRIISSLVVTGSKDIDREPPIDIYEDGDKVIVLFDMPGVRKEQIKLRIGM
NYIEVNVEPTAYIATGKPVLLERFSNYKLHRRVELPFNVKLDDVKAYYKDGVLQVHLTKLPGYNTAEVAIE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17307; Mature: 17307

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQIVKEEQQVVNNPPNIGREITELEKSLRRIISSLVVTGSKDIDREPPIDIYEDGDKV
CCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEE
IVLFDMPGVRKEQIKLRIGMNYIEVNVEPTAYIATGKPVLLERFSNYKLHRRVELPFNVK
EEEECCCCCCCEEEEEEECCEEEEEEECCEEEEECCCHHHHHHCCCCEEEEEEECCCCEE
LDDVKAYYKDGVLQVHLTKLPGYNTAEVAIE
HHHHHHHHHCCEEEEEEEECCCCCCEEEEEC
>Mature Secondary Structure
MEVQIVKEEQQVVNNPPNIGREITELEKSLRRIISSLVVTGSKDIDREPPIDIYEDGDKV
CCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEE
IVLFDMPGVRKEQIKLRIGMNYIEVNVEPTAYIATGKPVLLERFSNYKLHRRVELPFNVK
EEEECCCCCCCEEEEEEECCEEEEEEECCEEEEECCCHHHHHHCCCCEEEEEEECCCCEE
LDDVKAYYKDGVLQVHLTKLPGYNTAEVAIE
HHHHHHHHHCCEEEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA