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The map label for this gene is yigC [C]

Identifier: 159041005

GI number: 159041005

Start: 455805

End: 457127

Strand: Reverse

Name: yigC [C]

Synonym: Cmaq_0422

Alternate gene names: 159041005

Gene position: 457127-455805 (Counterclockwise)

Preceding gene: 159041006

Following gene: 159041004

Centisome position: 22.0

GC content: 46.56

Gene sequence:

>1323_bases
ATGGACTTGAGTAATTACCTTAATGAATTAAGGGGGGCTGGTTTACTTAAGGTAGTTAACTCACCCATGGCGGTGGAGTT
CGATATACCGCTAATTGCTCATAGGTTCAGTGGCCTTGGGCCAGCCATACTCTTCAATAACATTAAGGATCACCCAGGCT
TCAGGGCTGTGGCCAACATAGTGGATACTAGGGTTAAGTTAATGATGGCCCTAGGGGTCAGTAATGCTGAGGAGGCTTAC
ATTAAGCTTCTTAACGCTGAGGCTAATCCCCTTGAACCAAGGGAGGTTAATGACTTCCCGCTCATTAGGCTAAGTGAGGT
TGATTTAAGTAAGCTCCCAGTGCCGAGGTTCTTTGAGAGGGAGCCTGGACCATGCTTAACCAGTGGTGTGGTTCTTGGTT
TAGGTGACTACGTTAATGCATCCTTCCATAGGCTTACAGTTATTGATAGGGATAAGTTCGTGATTAGGCTTGTGCCAAGG
CACCTCTACAGGATCTTTAATGATAATAAGGCTAAGGGGCGTGATACACCAATAGCCATAGTCTGGGGAATTCACCCAGC
CTTCCTCCTCGCCTCAGCCTCCTCCCCACCGTATGGTGTCAGTGAATTAGGTGTCGCCAATAGGCTCATGAACGGTGAAT
TAAGGGTTTTTAGGCTGAGTAACGGTGTTCCAGTTCCAGTTGATGCGGAAGTGGTTATGGAGGGTTTCATTCTTAAGGAT
GCTGAGCATGATGAGGGTCCGTGCGTTGACGTAATGAGTACATACGATGTAGTTAGGAGGCAGCCTGTGGTTAAAATAAC
CTCAATCTATGTTAAACCTAACCCAATAGTGCATGTACTTGTCGCCGGTGATGCTGAGAACTCTATTTTAATGGGTTTTG
AGAAGGAGGCCAGGATATGGAATGCAGTTAGGACTGTGGCTGATGTTAAGGCCGTTAGATTAACGAGGGGTGGTGGGGGT
TGGCTTCACGCCATTGTGGCTATTAGGAAGACAATTGAGGGTGAGGGTAAGAACGCAATACTGGCAGCCTTCTCCGCCCA
CCCAAGTTTAAAGCATGTTGTGGTTGTTGATGATGATGTTAACATTGATGACTTGAATGAGGTTGAGTGGGCAATTGCAA
CCAGGTTTAGGGCTGACGAGGACCTGGTGATCATTGAGGGTGTTAGGGGTTCAAGCCTTGATCCAGCAGCCATTGATCAA
TCAATAGGCTTAACAACAAAGATGGGTATTGACGCCACTAGGCCATTAAGTAAGGAAGCCTGGAGATTTGAGAGAGCTAA
GATTCCGGAGAGGATTAACATTAATGAGATTAAACTCGAGTAG

Upstream 100 bases:

>100_bases
TGCTTAACCTATACATGCCTCAAATAATGCACATATAGCTAATTAATCACCCGGGGTAATACGGTTAATACTTAATTAAG
GGCCTGGTGGTGCGTACTTA

Downstream 100 bases:

>100_bases
TAGGGTTTTAATCATATGGGAGGGTTTTTAAAGTGTACTTCTATTAAGAGTTAGGTTAGAGTAAATGTGAGTTGAATTTT
TAGTATCCGACATTTGCCTA

Product: UbiD family decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MDLSNYLNELRGAGLLKVVNSPMAVEFDIPLIAHRFSGLGPAILFNNIKDHPGFRAVANIVDTRVKLMMALGVSNAEEAY
IKLLNAEANPLEPREVNDFPLIRLSEVDLSKLPVPRFFEREPGPCLTSGVVLGLGDYVNASFHRLTVIDRDKFVIRLVPR
HLYRIFNDNKAKGRDTPIAIVWGIHPAFLLASASSPPYGVSELGVANRLMNGELRVFRLSNGVPVPVDAEVVMEGFILKD
AEHDEGPCVDVMSTYDVVRRQPVVKITSIYVKPNPIVHVLVAGDAENSILMGFEKEARIWNAVRTVADVKAVRLTRGGGG
WLHAIVAIRKTIEGEGKNAILAAFSAHPSLKHVVVVDDDVNIDDLNEVEWAIATRFRADEDLVIIEGVRGSSLDPAAIDQ
SIGLTTKMGIDATRPLSKEAWRFERAKIPERININEIKLE

Sequences:

>Translated_440_residues
MDLSNYLNELRGAGLLKVVNSPMAVEFDIPLIAHRFSGLGPAILFNNIKDHPGFRAVANIVDTRVKLMMALGVSNAEEAY
IKLLNAEANPLEPREVNDFPLIRLSEVDLSKLPVPRFFEREPGPCLTSGVVLGLGDYVNASFHRLTVIDRDKFVIRLVPR
HLYRIFNDNKAKGRDTPIAIVWGIHPAFLLASASSPPYGVSELGVANRLMNGELRVFRLSNGVPVPVDAEVVMEGFILKD
AEHDEGPCVDVMSTYDVVRRQPVVKITSIYVKPNPIVHVLVAGDAENSILMGFEKEARIWNAVRTVADVKAVRLTRGGGG
WLHAIVAIRKTIEGEGKNAILAAFSAHPSLKHVVVVDDDVNIDDLNEVEWAIATRFRADEDLVIIEGVRGSSLDPAAIDQ
SIGLTTKMGIDATRPLSKEAWRFERAKIPERININEIKLE
>Mature_440_residues
MDLSNYLNELRGAGLLKVVNSPMAVEFDIPLIAHRFSGLGPAILFNNIKDHPGFRAVANIVDTRVKLMMALGVSNAEEAY
IKLLNAEANPLEPREVNDFPLIRLSEVDLSKLPVPRFFEREPGPCLTSGVVLGLGDYVNASFHRLTVIDRDKFVIRLVPR
HLYRIFNDNKAKGRDTPIAIVWGIHPAFLLASASSPPYGVSELGVANRLMNGELRVFRLSNGVPVPVDAEVVMEGFILKD
AEHDEGPCVDVMSTYDVVRRQPVVKITSIYVKPNPIVHVLVAGDAENSILMGFEKEARIWNAVRTVADVKAVRLTRGGGG
WLHAIVAIRKTIEGEGKNAILAAFSAHPSLKHVVVVDDDVNIDDLNEVEWAIATRFRADEDLVIIEGVRGSSLDPAAIDQ
SIGLTTKMGIDATRPLSKEAWRFERAKIPERININEIKLE

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=461, Percent_Identity=27.765726681128, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 48517; Mature: 48517

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSNYLNELRGAGLLKVVNSPMAVEFDIPLIAHRFSGLGPAILFNNIKDHPGFRAVANI
CCHHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHCCCCHHHEECCCCCCCCHHHHHHH
VDTRVKLMMALGVSNAEEAYIKLLNAEANPLEPREVNDFPLIRLSEVDLSKLPVPRFFER
HHHHHHHHHHHCCCCCHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHCC
EPGPCLTSGVVLGLGDYVNASFHRLTVIDRDKFVIRLVPRHLYRIFNDNKAKGRDTPIAI
CCCCCCCCCEEEECCHHCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCEEE
VWGIHPAFLLASASSPPYGVSELGVANRLMNGELRVFRLSNGVPVPVDAEVVMEGFILKD
EECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCEEEEC
AEHDEGPCVDVMSTYDVVRRQPVVKITSIYVKPNPIVHVLVAGDAENSILMGFEKEARIW
CCCCCCCEEHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEECCHHHHHH
NAVRTVADVKAVRLTRGGGGWLHAIVAIRKTIEGEGKNAILAAFSAHPSLKHVVVVDDDV
HHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCC
NIDDLNEVEWAIATRFRADEDLVIIEGVRGSSLDPAAIDQSIGLTTKMGIDATRPLSKEA
CCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCCCHHH
WRFERAKIPERININEIKLE
HHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MDLSNYLNELRGAGLLKVVNSPMAVEFDIPLIAHRFSGLGPAILFNNIKDHPGFRAVANI
CCHHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHCCCCHHHEECCCCCCCCHHHHHHH
VDTRVKLMMALGVSNAEEAYIKLLNAEANPLEPREVNDFPLIRLSEVDLSKLPVPRFFER
HHHHHHHHHHHCCCCCHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHCC
EPGPCLTSGVVLGLGDYVNASFHRLTVIDRDKFVIRLVPRHLYRIFNDNKAKGRDTPIAI
CCCCCCCCCEEEECCHHCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCEEE
VWGIHPAFLLASASSPPYGVSELGVANRLMNGELRVFRLSNGVPVPVDAEVVMEGFILKD
EECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCEEEEC
AEHDEGPCVDVMSTYDVVRRQPVVKITSIYVKPNPIVHVLVAGDAENSILMGFEKEARIW
CCCCCCCEEHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEECCHHHHHH
NAVRTVADVKAVRLTRGGGGWLHAIVAIRKTIEGEGKNAILAAFSAHPSLKHVVVVDDDV
HHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCC
NIDDLNEVEWAIATRFRADEDLVIIEGVRGSSLDPAAIDQSIGLTTKMGIDATRPLSKEA
CCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCCCHHH
WRFERAKIPERININEIKLE
HHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]