Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is yfiL [H]

Identifier: 159040969

GI number: 159040969

Start: 420401

End: 421147

Strand: Reverse

Name: yfiL [H]

Synonym: Cmaq_0385

Alternate gene names: 159040969

Gene position: 421147-420401 (Counterclockwise)

Preceding gene: 159040973

Following gene: 159040968

Centisome position: 20.27

GC content: 44.18

Gene sequence:

>747_bases
ATGAGTAATAATGATGTACTTAAAGTTGAGAAGCTTGTGGTTAAGTATGGTGAAAAAACCGCCGTTAAGGGTATAAGCTT
CACTGTGAATAATGGTGAAGTCTACTGTCTCCTAGGCCCTAATGGAGCCGGTAAGACATCAACGATAAAGGCTGTATTAG
GTTTAGTTAAGTATGAGGGTTTAATAGATGTACTTGGCCTCGGCCCCCCTTCACCAGTGGTCATGAATCACGTGGGGGTT
GTTATGGAGACTCCAGCTGTCTTAGAGGCATTAACTGTGAAGGAGTTCCTTGAGTTCCTTGGATCTGTTAGAGGTACATT
CAATGCTAGGAGGGTTGAGGCGCTTCTGGAGGCCTTTGAATTGAAGGATTACATTAATACTCCAATAGCCGCGTTATCAG
CTGGTAATAAGCAGAAGGTGGCTATAGTGGCTGCGTTAATGCATGAGCCAAGGCTCCTGCTTCTTGATGAACCATTCAAC
TTCCTTGACGTAAAGTCAGTTAGGATACTTAAGGAGATAATGCAGAGGCATATTGAGTCAGGGGGCTCAATATTATTTTC
AACCCACATAATGGAGGTTGCGGAGAGGGTGTGTAGTAGGATAGGTATAATTAATGATGGTGTACTGGTTACTGAGGGTA
CTCCAGGTAGGATTAAGGAGGAGGCTAATGCAGGCACATTGGAGGATGCGTTCCTGAAGGCTATACATGCTGAGGAGGAG
ATTAGAAGTATACTGGAGGGTCTTTAA

Upstream 100 bases:

>100_bases
AAATCTATAAACCACGCTGAGGCTTATTTTTAAGTCAAATACCTTACGCCTAGTCTTCAGTGAGTTAAGTTTTTAAGACT
TAATTCAAGTCGCATATTTA

Downstream 100 bases:

>100_bases
TGGTAAGTGTACGTAGGCTGGCCTCGGTTTTATCCAAGGAGTTAATGTACCAGGGTTACACTGCATCTAGGGTAAGTGGC
TTAAGGCCGATGAACATTGA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSNNDVLKVEKLVVKYGEKTAVKGISFTVNNGEVYCLLGPNGAGKTSTIKAVLGLVKYEGLIDVLGLGPPSPVVMNHVGV
VMETPAVLEALTVKEFLEFLGSVRGTFNARRVEALLEAFELKDYINTPIAALSAGNKQKVAIVAALMHEPRLLLLDEPFN
FLDVKSVRILKEIMQRHIESGGSILFSTHIMEVAERVCSRIGIINDGVLVTEGTPGRIKEEANAGTLEDAFLKAIHAEEE
IRSILEGL

Sequences:

>Translated_248_residues
MSNNDVLKVEKLVVKYGEKTAVKGISFTVNNGEVYCLLGPNGAGKTSTIKAVLGLVKYEGLIDVLGLGPPSPVVMNHVGV
VMETPAVLEALTVKEFLEFLGSVRGTFNARRVEALLEAFELKDYINTPIAALSAGNKQKVAIVAALMHEPRLLLLDEPFN
FLDVKSVRILKEIMQRHIESGGSILFSTHIMEVAERVCSRIGIINDGVLVTEGTPGRIKEEANAGTLEDAFLKAIHAEEE
IRSILEGL
>Mature_247_residues
SNNDVLKVEKLVVKYGEKTAVKGISFTVNNGEVYCLLGPNGAGKTSTIKAVLGLVKYEGLIDVLGLGPPSPVVMNHVGVV
METPAVLEALTVKEFLEFLGSVRGTFNARRVEALLEAFELKDYINTPIAALSAGNKQKVAIVAALMHEPRLLLLDEPFNF
LDVKSVRILKEIMQRHIESGGSILFSTHIMEVAERVCSRIGIINDGVLVTEGTPGRIKEEANAGTLEDAFLKAIHAEEEI
RSILEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI47078218, Length=237, Percent_Identity=31.6455696202532, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI45446740, Length=237, Percent_Identity=31.6455696202532, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI153792144, Length=237, Percent_Identity=31.2236286919831, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI27477115, Length=236, Percent_Identity=31.7796610169492, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI27436953, Length=214, Percent_Identity=32.2429906542056, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI150417984, Length=232, Percent_Identity=31.0344827586207, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI116734710, Length=211, Percent_Identity=31.2796208530806, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI6005701, Length=213, Percent_Identity=31.924882629108, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=31.651376146789, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=31.651376146789, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI31657092, Length=242, Percent_Identity=29.3388429752066, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI27262624, Length=238, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI27262626, Length=238, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI21536376, Length=230, Percent_Identity=28.2608695652174, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI105990541, Length=233, Percent_Identity=29.6137339055794, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI11967969, Length=230, Percent_Identity=26.5217391304348, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI46592964, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592915, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592898, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592956, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592971, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592978, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI255708477, Length=239, Percent_Identity=24.6861924686192, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081782, Length=249, Percent_Identity=34.5381526104418, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1789593, Length=245, Percent_Identity=30.6122448979592, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI48994943, Length=233, Percent_Identity=29.6137339055794, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786319, Length=211, Percent_Identity=34.5971563981043, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=32.2429906542056, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787712, Length=211, Percent_Identity=31.2796208530806, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786563, Length=244, Percent_Identity=30.327868852459, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787792, Length=204, Percent_Identity=27.9411764705882, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788761, Length=221, Percent_Identity=31.2217194570136, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082064, Length=205, Percent_Identity=33.1707317073171, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787089, Length=214, Percent_Identity=33.1775700934579, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790544, Length=243, Percent_Identity=25.1028806584362, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=27.7533039647577, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081709, Length=227, Percent_Identity=28.6343612334802, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI48995001, Length=221, Percent_Identity=27.6018099547511, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=27.2321428571429, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790467, Length=215, Percent_Identity=26.9767441860465, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=27.9279279279279, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790525, Length=216, Percent_Identity=28.7037037037037, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789891, Length=244, Percent_Identity=27.0491803278689, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI87082267, Length=226, Percent_Identity=28.3185840707965, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI145693107, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788165, Length=214, Percent_Identity=28.0373831775701, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786398, Length=221, Percent_Identity=32.1266968325792, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787029, Length=212, Percent_Identity=27.8301886792453, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790739, Length=238, Percent_Identity=23.9495798319328, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788053, Length=174, Percent_Identity=29.3103448275862, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789864, Length=245, Percent_Identity=26.9387755102041, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787759, Length=240, Percent_Identity=25.4166666666667, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786698, Length=201, Percent_Identity=29.3532338308458, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789991, Length=216, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788506, Length=221, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1787500, Length=210, Percent_Identity=27.1428571428571, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788897, Length=211, Percent_Identity=28.9099526066351, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=28.5087719298246, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=23.7209302325581, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786803, Length=229, Percent_Identity=22.707423580786, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786975, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=28.2511210762332, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=27.5, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786872, Length=209, Percent_Identity=28.7081339712919, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786345, Length=214, Percent_Identity=28.5046728971963, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=28.3653846153846, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787972, Length=251, Percent_Identity=25.0996015936255, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1786253, Length=201, Percent_Identity=29.3532338308458, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=254, Percent_Identity=31.8897637795276, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17510237, Length=221, Percent_Identity=28.9592760180996, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17565586, Length=251, Percent_Identity=27.4900398406374, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71983523, Length=220, Percent_Identity=28.6363636363636, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71983516, Length=220, Percent_Identity=28.6363636363636, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71983510, Length=220, Percent_Identity=28.6363636363636, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=27.4336283185841, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17569143, Length=219, Percent_Identity=26.9406392694064, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=225, Percent_Identity=29.3333333333333, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=206, Percent_Identity=27.6699029126214, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=204, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=204, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=204, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=211, Percent_Identity=27.4881516587678, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=25.8771929824561, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6324314, Length=187, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643674, Length=237, Percent_Identity=30.8016877637131, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI221512771, Length=228, Percent_Identity=32.0175438596491, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28573573, Length=225, Percent_Identity=30.6666666666667, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28573571, Length=225, Percent_Identity=30.6666666666667, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24582014, Length=232, Percent_Identity=31.0344827586207, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24582012, Length=232, Percent_Identity=31.0344827586207, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI28574150, Length=217, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI116007328, Length=217, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI221500365, Length=215, Percent_Identity=26.9767441860465, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI116007184, Length=215, Percent_Identity=26.9767441860465, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI85725262, Length=229, Percent_Identity=30.5676855895196, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24648314, Length=223, Percent_Identity=26.457399103139, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24650853, Length=237, Percent_Identity=29.1139240506329, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666092, Length=227, Percent_Identity=29.0748898678414, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24650855, Length=238, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281362751, Length=238, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571209, Length=188, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574744, Length=179, Percent_Identity=26.2569832402235, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26864; Mature: 26733

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSNNDVLKVEKLVVKYGEKTAVKGISFTVNNGEVYCLLGPNGAGKTSTIKAVLGLVKYEG
CCCCCHHHHHHHHHHCCCCHHCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHH
LIDVLGLGPPSPVVMNHVGVVMETPAVLEALTVKEFLEFLGSVRGTFNARRVEALLEAFE
HHHHHCCCCCCCHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LKDYINTPIAALSAGNKQKVAIVAALMHEPRLLLLDEPFNFLDVKSVRILKEIMQRHIES
HHHHHCCCHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
GGSILFSTHIMEVAERVCSRIGIINDGVLVTEGTPGRIKEEANAGTLEDAFLKAIHAEEE
CCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IRSILEGL
HHHHHHCC
>Mature Secondary Structure 
SNNDVLKVEKLVVKYGEKTAVKGISFTVNNGEVYCLLGPNGAGKTSTIKAVLGLVKYEG
CCCCHHHHHHHHHHCCCCHHCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHH
LIDVLGLGPPSPVVMNHVGVVMETPAVLEALTVKEFLEFLGSVRGTFNARRVEALLEAFE
HHHHHCCCCCCCHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LKDYINTPIAALSAGNKQKVAIVAALMHEPRLLLLDEPFNFLDVKSVRILKEIMQRHIES
HHHHHCCCHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
GGSILFSTHIMEVAERVCSRIGIINDGVLVTEGTPGRIKEEANAGTLEDAFLKAIHAEEE
CCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IRSILEGL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]