| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040949
Identifier: 159040949
GI number: 159040949
Start: 402695
End: 403051
Strand: Reverse
Name: 159040949
Synonym: Cmaq_0365
Alternate gene names: NA
Gene position: 403051-402695 (Counterclockwise)
Preceding gene: 159040959
Following gene: 159040948
Centisome position: 19.4
GC content: 42.02
Gene sequence:
>357_bases ATGGGTAGAGGCACCCACGTCTTCACGGTTAATGAGGCTAATGCAATAGTCATGGAAATTAAACCAGTATTAGGGGGTTT AATGGAGGCGTATAAGGAGGGTGAACTAGGCATCATACGTGAACAGTCAAGATGGTTGATTAAATTATCACACAGGCTTG GCTTCAGCATAAACCCTAGGCTCGGTATCATTCACTTCCCAACACTATATAGGGGTAGTTATGATGCTTTACTATGCTAT AGATTCAATGAGCCTAAGGTAATGTATTGGCATTGGGTTGATAGTGCTGTTAGGATGAGGATAAGGAATATTAACCTATT CGGCTCAAGGGGGATTGAGAATAAGGAGGCTGGTTAA
Upstream 100 bases:
>100_bases TGCAATGTTAATTACTGGTTTAATACTTTTAGTCAACTCTATAAACCCAGTAATCCCTAGATTAATTACGCTTAAATGCA GCCGTAGTTAAGGTTAAGTC
Downstream 100 bases:
>100_bases CTGCCATGCATTAATTGAGTAGAAACGTTTATAAGCTGAGTTGCAGCACCGATATCGAGTAGCTATGTCATCAGATTCAG CCATAAAGGCTATAAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MGRGTHVFTVNEANAIVMEIKPVLGGLMEAYKEGELGIIREQSRWLIKLSHRLGFSINPRLGIIHFPTLYRGSYDALLCY RFNEPKVMYWHWVDSAVRMRIRNINLFGSRGIENKEAG
Sequences:
>Translated_118_residues MGRGTHVFTVNEANAIVMEIKPVLGGLMEAYKEGELGIIREQSRWLIKLSHRLGFSINPRLGIIHFPTLYRGSYDALLCY RFNEPKVMYWHWVDSAVRMRIRNINLFGSRGIENKEAG >Mature_117_residues GRGTHVFTVNEANAIVMEIKPVLGGLMEAYKEGELGIIREQSRWLIKLSHRLGFSINPRLGIIHFPTLYRGSYDALLCYR FNEPKVMYWHWVDSAVRMRIRNINLFGSRGIENKEAG
Specific function: Unknown
COG id: COG4911
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13623; Mature: 13492
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGTHVFTVNEANAIVMEIKPVLGGLMEAYKEGELGIIREQSRWLIKLSHRLGFSINPR CCCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEECCC LGIIHFPTLYRGSYDALLCYRFNEPKVMYWHWVDSAVRMRIRNINLFGSRGIENKEAG EEEEECCCEECCCCCEEEEEEECCCCEEEEEECCHHHEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure GRGTHVFTVNEANAIVMEIKPVLGGLMEAYKEGELGIIREQSRWLIKLSHRLGFSINPR CCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEECCC LGIIHFPTLYRGSYDALLCYRFNEPKVMYWHWVDSAVRMRIRNINLFGSRGIENKEAG EEEEECCCEECCCCCEEEEEEECCCCEEEEEECCHHHEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA