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The map label for this gene is yisS [H]

Identifier: 159040940

GI number: 159040940

Start: 394333

End: 395358

Strand: Reverse

Name: yisS [H]

Synonym: Cmaq_0356

Alternate gene names: 159040940

Gene position: 395358-394333 (Counterclockwise)

Preceding gene: 159040941

Following gene: 159040939

Centisome position: 19.03

GC content: 44.15

Gene sequence:

>1026_bases
ATGTGTAGCTCAGTTAGGAGAATTAGGGTTGCTATTGTTGGACTTGGTGAAGTCTCTCTAAACCACTATAATGCTCTCAG
GAGCACTAGGTATGGTGAATTAGCCGGTGTGTTTAGTCATAGTAGGAATAGGGTTGAGGAGGTGGCTAAGGCTTGGGGAA
CTAGGCCATACTACTCCTTCAAGGAGTTGATTAATGATCCTGGTATTGATGCTTTAATAATATGTAGTGCCGATGAGCAT
CATCATGATCAGGCAGTGGAGGCTATGAGGGCTGGTAAGCATGTGCTTGTTGAGAAGCCCCTAGCCTTAAGTGCCAGGGA
GGTTGCGGACATGGCTAAGGTAAGCCTTGAGACTAATAAAGTATTAATGCCTGTGCATAATTACGTCTTTAGGCCTAAGG
TTAGGAGGGCTAAGGAACTCATTGAGAGTGGGGCTATTGGTGAACCAACCTACGCATTATTCATTGTTACCCAAAGGTTA
AGTGAGGAAGTGGCTAGGAGACATCATGGCGCATTATTCACTCAATCATACCACTCAATATACACCTCAAACTACCTCCT
TGGACCACCCATTGAGTTCCAGGCAATGTGGGGTACGTTAACTTATAGGGAGGTTAAGAGTGATGAGGTCTTTGTGGCAA
CCTTCAGGTATAGGAATGGGGCTTTAGGCAATATTGTGGCTAATTGGGCTGCGGATGATTTATCATCATACCCATTCATG
TGGCTTGACAAGGTTATTGGGACTAAGGGTACTGTGACTATTAACTCCTTTGATGATGTGGTTGCATCACTTCAAGCAGG
CTCATTCATGATGGGTAAGACAGTGGATTACGTGGAGTCCTTTAAGGGTATTGTAAGGCATTTTATAGATGATGTTTTAG
CCGAAGGCCGTAAACCTGAGCAGTCAATCTACGATGCATTACTAGTCCATGACATTATTGAGGGTCTTAGGGAGAGCGCT
GGGTCAGGTAGGAGGATTAGGTATGAGGTATTGAGCCTTGAGCAATTAATTGAGAAGTATAGTTAA

Upstream 100 bases:

>100_bases
ATTAATTCAGGGGGTGTTCACTCATGGTTATATTAATGCATTAATATACGATACAGCGTTAGCGTAATTAGTTTTAAACA
CTTGGCCCTTATCTTAATCA

Downstream 100 bases:

>100_bases
GCATGATTCAGGAATACTTGATTAAGGCTTAAGTGTGAAAAGCTTAAAAATAAACAGGCAGAAACTTAATGATCCTGAGG
GCTAGGCTCCGCATAAGCCT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MCSSVRRIRVAIVGLGEVSLNHYNALRSTRYGELAGVFSHSRNRVEEVAKAWGTRPYYSFKELINDPGIDALIICSADEH
HHDQAVEAMRAGKHVLVEKPLALSAREVADMAKVSLETNKVLMPVHNYVFRPKVRRAKELIESGAIGEPTYALFIVTQRL
SEEVARRHHGALFTQSYHSIYTSNYLLGPPIEFQAMWGTLTYREVKSDEVFVATFRYRNGALGNIVANWAADDLSSYPFM
WLDKVIGTKGTVTINSFDDVVASLQAGSFMMGKTVDYVESFKGIVRHFIDDVLAEGRKPEQSIYDALLVHDIIEGLRESA
GSGRRIRYEVLSLEQLIEKYS

Sequences:

>Translated_341_residues
MCSSVRRIRVAIVGLGEVSLNHYNALRSTRYGELAGVFSHSRNRVEEVAKAWGTRPYYSFKELINDPGIDALIICSADEH
HHDQAVEAMRAGKHVLVEKPLALSAREVADMAKVSLETNKVLMPVHNYVFRPKVRRAKELIESGAIGEPTYALFIVTQRL
SEEVARRHHGALFTQSYHSIYTSNYLLGPPIEFQAMWGTLTYREVKSDEVFVATFRYRNGALGNIVANWAADDLSSYPFM
WLDKVIGTKGTVTINSFDDVVASLQAGSFMMGKTVDYVESFKGIVRHFIDDVLAEGRKPEQSIYDALLVHDIIEGLRESA
GSGRRIRYEVLSLEQLIEKYS
>Mature_341_residues
MCSSVRRIRVAIVGLGEVSLNHYNALRSTRYGELAGVFSHSRNRVEEVAKAWGTRPYYSFKELINDPGIDALIICSADEH
HHDQAVEAMRAGKHVLVEKPLALSAREVADMAKVSLETNKVLMPVHNYVFRPKVRRAKELIESGAIGEPTYALFIVTQRL
SEEVARRHHGALFTQSYHSIYTSNYLLGPPIEFQAMWGTLTYREVKSDEVFVATFRYRNGALGNIVANWAADDLSSYPFM
WLDKVIGTKGTVTINSFDDVVASLQAGSFMMGKTVDYVESFKGIVRHFIDDVLAEGRKPEQSIYDALLVHDIIEGLRESA
GSGRRIRYEVLSLEQLIEKYS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=298, Percent_Identity=23.1543624161074, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI87081947, Length=145, Percent_Identity=30.3448275862069, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38379; Mature: 38379

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSSVRRIRVAIVGLGEVSLNHYNALRSTRYGELAGVFSHSRNRVEEVAKAWGTRPYYSF
CCCCHHEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KELINDPGIDALIICSADEHHHDQAVEAMRAGKHVLVEKPLALSAREVADMAKVSLETNK
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCE
VLMPVHNYVFRPKVRRAKELIESGAIGEPTYALFIVTQRLSEEVARRHHGALFTQSYHSI
EEEEHHHHHHCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH
YTSNYLLGPPIEFQAMWGTLTYREVKSDEVFVATFRYRNGALGNIVANWAADDLSSYPFM
HHCCCEECCCCEEEEHHCEEEEHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHH
WLDKVIGTKGTVTINSFDDVVASLQAGSFMMGKTVDYVESFKGIVRHFIDDVLAEGRKPE
HHHHHHCCCCEEEECCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
QSIYDALLVHDIIEGLRESAGSGRRIRYEVLSLEQLIEKYS
HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MCSSVRRIRVAIVGLGEVSLNHYNALRSTRYGELAGVFSHSRNRVEEVAKAWGTRPYYSF
CCCCHHEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KELINDPGIDALIICSADEHHHDQAVEAMRAGKHVLVEKPLALSAREVADMAKVSLETNK
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCE
VLMPVHNYVFRPKVRRAKELIESGAIGEPTYALFIVTQRLSEEVARRHHGALFTQSYHSI
EEEEHHHHHHCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH
YTSNYLLGPPIEFQAMWGTLTYREVKSDEVFVATFRYRNGALGNIVANWAADDLSSYPFM
HHCCCEECCCCEEEEHHCEEEEHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHH
WLDKVIGTKGTVTINSFDDVVASLQAGSFMMGKTVDYVESFKGIVRHFIDDVLAEGRKPE
HHHHHHCCCCEEEECCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
QSIYDALLVHDIIEGLRESAGSGRRIRYEVLSLEQLIEKYS
HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]