| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040896
Identifier: 159040896
GI number: 159040896
Start: 347703
End: 349511
Strand: Reverse
Name: 159040896
Synonym: Cmaq_0310
Alternate gene names: NA
Gene position: 349511-347703 (Counterclockwise)
Preceding gene: 159040897
Following gene: 159040895
Centisome position: 16.82
GC content: 40.52
Gene sequence:
>1809_bases ATGAGGAGGCTTATCGCATTCTTAACGGCATTCATAGCCATGATGCCTGTGTTGGCAGCCGTACCTAACTACATTGTTAA TTATGGTTTAATCTACATTAATGGTTCCTCAATACCAGTGATGCTGCCTATTAATGGTTCATCAATAATACCGTTGAATT GCAATGGCTTAGTTAATTTAACCCTTGTAATAGACCCAAGGTCTCAGTTAGGCTTAGCCTCAGCATCACTGGTTCTGAGC AATGGATCAATAACCCCAGTAACTGGTTTAAACACCCCTAAGTACATGAGTACTTGGGTTAACTGCAGGAGCACATACGG GGTAATAGTGTTTGTCTCCAGTTACATGAAAATACCCCCAGTGCTTTACCTCTACAATGGTCCAGTGATCACCGGTAGCT ATAGTGGATCCGGTGTCCTTACGATTAATAATACTGTTAGCCTTGGGTTAACCCCCCTATATACTATTATTGGGTTAGTG GTCATTGGGGGATCAGTGAAGCCGGCTTCACCATTCACGTTCCTGGTTAATAAAAGCACCTACACTATTAATACTAATGG TATACCCATAGTGATGAATAAGTACGTTTACATATCTTACACCCTTAACCCAACCTTCAGGGTTAATAACGCCACAGTAT ACTACTCAGTTAACACAACATACTCAATACCAGCTACTTCAAGCATTCCCTGGAGTGGCTTAGCCCTATTAAGCAATGAC ACAGCCTACTACACCGTTAGCTTGACTGGATCCTTAATGAGGCTAAACGCAACCATACCCATATTCATTCCTGGGCAGGA ATTAGTTAAGTTAAGTGGATCAGTTAATTGGATTGAATCCACGGCCTCAGTGTCCTTGAACCCATGGTGCAGTAACCTCC TAATACCAACCCAGGTCAGTGGAGGTAACGTAATAGTAACGGTTCCATCCAATGAAACGCTTTATGTAGGTAATGAACCC GTGGTTAACCTTATTGTGCTTGGGTTAGCCAACAATAAGGCTACAGTTACCTTAAACAATATTATAACTGGGAGTTCAAT TAGTGTTGAGACACTTGATGGATATCCTTTAAACGCAACAATACTACTCCTAGGCCATGGAGCATACAGTGTTTTAAGAA ACAATACCTGCCTAGTCCCAGGTCTCTATTCCATGGTTATCATGAGTGATTCAGGTTATTATAGGCTTGTGGTTAATATA AACCAATCATCAACCATAGTCAAGGTTCCGTTATTTCACGTAGTTAACTTAAGCACTACTTTAACTCAATTACCCCCCTC ATGCAGCAATGTAATGCTTACTATGAATTCATCCGCGCATTTAATCAGTAGTAATGATAATGTGTTTAAGTTTACCTTAA GTAACGTTAAATATGGGTCCAGTATACTCATTAACGCAGTGATTAATGGTTCTATAGTAGGTTCATCAATGATTAAGGTT AATTCAAGTGAAATAAACGTGAGCATACCGGTGAGGGTGATTAATGTTAAGGTGACTGGGCTCTTAGGCTCACCAATAAG TGCTGTTGTTGATGCAGGTGGTTTAAGCTTCAATATTAATGGCTCAGCCACCATATGCGTCCCAATTGGCGTCAACTACG TTACAGTACACGCGGCAATTGGCTCCTATACAGTGCCAATAGTGGGTAATTCTGCGTCAGTTAACGTACTATATTACATT AACTGGAGTTACTTAGCCGCAATACTACTTATAATCGTAATCATAATCATTGCCGCATTATTAGCGAAGCTGGTTAGCGG TGGGAAGAATAATGATAATGGGGATTTCGTAATAACTGTTGGTGATTAA
Upstream 100 bases:
>100_bases CATTAACTCATTTTAACCTGTAATGAGGCATTAATGCTTGGTATTAATGCTTTAGTAAACAATAGGTTAAATAGCTTCAG GATGAAAAGGCGTCCTTGTG
Downstream 100 bases:
>100_bases GTCATAGTAAACTATTGTTAGCTACGTGGCCGTAATATAGGGGATATGGGTTTAAACGGGGGGTAAAGTTTTTAAGCAAG GAAATATTATGGTTTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MRRLIAFLTAFIAMMPVLAAVPNYIVNYGLIYINGSSIPVMLPINGSSIIPLNCNGLVNLTLVIDPRSQLGLASASLVLS NGSITPVTGLNTPKYMSTWVNCRSTYGVIVFVSSYMKIPPVLYLYNGPVITGSYSGSGVLTINNTVSLGLTPLYTIIGLV VIGGSVKPASPFTFLVNKSTYTINTNGIPIVMNKYVYISYTLNPTFRVNNATVYYSVNTTYSIPATSSIPWSGLALLSND TAYYTVSLTGSLMRLNATIPIFIPGQELVKLSGSVNWIESTASVSLNPWCSNLLIPTQVSGGNVIVTVPSNETLYVGNEP VVNLIVLGLANNKATVTLNNIITGSSISVETLDGYPLNATILLLGHGAYSVLRNNTCLVPGLYSMVIMSDSGYYRLVVNI NQSSTIVKVPLFHVVNLSTTLTQLPPSCSNVMLTMNSSAHLISSNDNVFKFTLSNVKYGSSILINAVINGSIVGSSMIKV NSSEINVSIPVRVINVKVTGLLGSPISAVVDAGGLSFNINGSATICVPIGVNYVTVHAAIGSYTVPIVGNSASVNVLYYI NWSYLAAILLIIVIIIIAALLAKLVSGGKNNDNGDFVITVGD
Sequences:
>Translated_602_residues MRRLIAFLTAFIAMMPVLAAVPNYIVNYGLIYINGSSIPVMLPINGSSIIPLNCNGLVNLTLVIDPRSQLGLASASLVLS NGSITPVTGLNTPKYMSTWVNCRSTYGVIVFVSSYMKIPPVLYLYNGPVITGSYSGSGVLTINNTVSLGLTPLYTIIGLV VIGGSVKPASPFTFLVNKSTYTINTNGIPIVMNKYVYISYTLNPTFRVNNATVYYSVNTTYSIPATSSIPWSGLALLSND TAYYTVSLTGSLMRLNATIPIFIPGQELVKLSGSVNWIESTASVSLNPWCSNLLIPTQVSGGNVIVTVPSNETLYVGNEP VVNLIVLGLANNKATVTLNNIITGSSISVETLDGYPLNATILLLGHGAYSVLRNNTCLVPGLYSMVIMSDSGYYRLVVNI NQSSTIVKVPLFHVVNLSTTLTQLPPSCSNVMLTMNSSAHLISSNDNVFKFTLSNVKYGSSILINAVINGSIVGSSMIKV NSSEINVSIPVRVINVKVTGLLGSPISAVVDAGGLSFNINGSATICVPIGVNYVTVHAAIGSYTVPIVGNSASVNVLYYI NWSYLAAILLIIVIIIIAALLAKLVSGGKNNDNGDFVITVGD >Mature_602_residues MRRLIAFLTAFIAMMPVLAAVPNYIVNYGLIYINGSSIPVMLPINGSSIIPLNCNGLVNLTLVIDPRSQLGLASASLVLS NGSITPVTGLNTPKYMSTWVNCRSTYGVIVFVSSYMKIPPVLYLYNGPVITGSYSGSGVLTINNTVSLGLTPLYTIIGLV VIGGSVKPASPFTFLVNKSTYTINTNGIPIVMNKYVYISYTLNPTFRVNNATVYYSVNTTYSIPATSSIPWSGLALLSND TAYYTVSLTGSLMRLNATIPIFIPGQELVKLSGSVNWIESTASVSLNPWCSNLLIPTQVSGGNVIVTVPSNETLYVGNEP VVNLIVLGLANNKATVTLNNIITGSSISVETLDGYPLNATILLLGHGAYSVLRNNTCLVPGLYSMVIMSDSGYYRLVVNI NQSSTIVKVPLFHVVNLSTTLTQLPPSCSNVMLTMNSSAHLISSNDNVFKFTLSNVKYGSSILINAVINGSIVGSSMIKV NSSEINVSIPVRVINVKVTGLLGSPISAVVDAGGLSFNINGSATICVPIGVNYVTVHAAIGSYTVPIVGNSASVNVLYYI NWSYLAAILLIIVIIIIAALLAKLVSGGKNNDNGDFVITVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63719; Mature: 63719
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLIAFLTAFIAMMPVLAAVPNYIVNYGLIYINGSSIPVMLPINGSSIIPLNCNGLVNL CHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCEEEEEEECCCEEEEEECCCEEEE TLVIDPRSQLGLASASLVLSNGSITPVTGLNTPKYMSTWVNCRSTYGVIVFVSSYMKIPP EEEECCCHHCCCEEEEEEEECCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCC VLYLYNGPVITGSYSGSGVLTINNTVSLGLTPLYTIIGLVVIGGSVKPASPFTFLVNKST EEEEECCCEEEECCCCCEEEEECCEEEECCHHHHHHHHHEEECCCCCCCCCEEEEEECEE YTINTNGIPIVMNKYVYISYTLNPTFRVNNATVYYSVNTTYSIPATSSIPWSGLALLSND EEEECCCEEEEEEEEEEEEEEECCEEEECCEEEEEEECEEEECCCCCCCCCCCEEEEECC TAYYTVSLTGSLMRLNATIPIFIPGQELVKLSGSVNWIESTASVSLNPWCSNLLIPTQVS CEEEEEEEECEEEEEECEEEEEECCHHHEEECCCCEEEECCCEEEECCCCCCCEEEEEEC GGNVIVTVPSNETLYVGNEPVVNLIVLGLANNKATVTLNNIITGSSISVETLDGYPLNAT CCEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEECCCCCCCEE ILLLGHGAYSVLRNNTCLVPGLYSMVIMSDSGYYRLVVNINQSSTIVKVPLFHVVNLSTT EEEEECCEEHHHCCCEEEECCCEEEEEECCCCEEEEEEEECCCCEEEEEEEEEEEECCHH LTQLPPSCSNVMLTMNSSAHLISSNDNVFKFTLSNVKYGSSILINAVINGSIVGSSMIKV HHHCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEEEECCEEECCEEEEE NSSEINVSIPVRVINVKVTGLLGSPISAVVDAGGLSFNINGSATICVPIGVNYVTVHAAI ECCEEEEEEEEEEEEEEEEEEECCCHHHHEECCCEEEEECCCEEEEEEECCCEEEEEEEC GSYTVPIVGNSASVNVLYYINWSYLAAILLIIVIIIIAALLAKLVSGGKNNDNGDFVITV CCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE GD CC >Mature Secondary Structure MRRLIAFLTAFIAMMPVLAAVPNYIVNYGLIYINGSSIPVMLPINGSSIIPLNCNGLVNL CHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCEEEEEEECCCEEEEEECCCEEEE TLVIDPRSQLGLASASLVLSNGSITPVTGLNTPKYMSTWVNCRSTYGVIVFVSSYMKIPP EEEECCCHHCCCEEEEEEEECCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCC VLYLYNGPVITGSYSGSGVLTINNTVSLGLTPLYTIIGLVVIGGSVKPASPFTFLVNKST EEEEECCCEEEECCCCCEEEEECCEEEECCHHHHHHHHHEEECCCCCCCCCEEEEEECEE YTINTNGIPIVMNKYVYISYTLNPTFRVNNATVYYSVNTTYSIPATSSIPWSGLALLSND EEEECCCEEEEEEEEEEEEEEECCEEEECCEEEEEEECEEEECCCCCCCCCCCEEEEECC TAYYTVSLTGSLMRLNATIPIFIPGQELVKLSGSVNWIESTASVSLNPWCSNLLIPTQVS CEEEEEEEECEEEEEECEEEEEECCHHHEEECCCCEEEECCCEEEECCCCCCCEEEEEEC GGNVIVTVPSNETLYVGNEPVVNLIVLGLANNKATVTLNNIITGSSISVETLDGYPLNAT CCEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEECCCCCCCEE ILLLGHGAYSVLRNNTCLVPGLYSMVIMSDSGYYRLVVNINQSSTIVKVPLFHVVNLSTT EEEEECCEEHHHCCCEEEECCCEEEEEECCCCEEEEEEEECCCCEEEEEEEEEEEECCHH LTQLPPSCSNVMLTMNSSAHLISSNDNVFKFTLSNVKYGSSILINAVINGSIVGSSMIKV HHHCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEEEECCEEECCEEEEE NSSEINVSIPVRVINVKVTGLLGSPISAVVDAGGLSFNINGSATICVPIGVNYVTVHAAI ECCEEEEEEEEEEEEEEEEEEECCCHHHHEECCCEEEEECCCEEEEEEECCCEEEEEEEC GSYTVPIVGNSASVNVLYYINWSYLAAILLIIVIIIIAALLAKLVSGGKNNDNGDFVITV CCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE GD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA