| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is thrB [H]
Identifier: 159040847
GI number: 159040847
Start: 298235
End: 299161
Strand: Reverse
Name: thrB [H]
Synonym: Cmaq_0261
Alternate gene names: 159040847
Gene position: 299161-298235 (Counterclockwise)
Preceding gene: 159040848
Following gene: 159040845
Centisome position: 14.4
GC content: 44.77
Gene sequence:
>927_bases TTGGGTACTGAGGAGTTGATTATTGAGGCTCCCGCATCAATAGCCAACCTTGGTCCTGCCTTTGATGTTGCTGCGCTTGC CATTAATCCACCAAGTGATATTGTTAAGGTTAAGGTAACTGATGGTGATGGTGTATTCATAAGGAATAGCGGTGAATACG CCTCCAGCCTACCCAGTGAGGGTAATGGGAACTCAGCCTACTTGGTGGCTACTAGGGCTATTGAGTTAGCTGGGTTAAGG AGGAGGATTGAGATTGAGGTTATTAAGCGTATTAAACCCGCCAGTGGATTAGGGAGTAGTGGTGCAACATCTGCTGCTGT GGCTTACGCATTGAATAAGTTACTTAACCTAAGCCTGAGTGAATGGGACTTAGTTGAATTAGCCTCCTACGGTGAATTAG CCTCAGCTGGGGTGAGGCATATGGATAATGTAGCCGCATCACTACTGGGTGGTTTAGTTCTTGTCAACCCAGTGATTAGG AGGGTTATTAGGGTTAACTTCCCTGAGTTAAGCATAGTGGTGGTTATTGAGGGTTCTAAACCAAACACCGGTTTCATGAG GAGTATCCTACCTAAGGCCTATGAGTTAAGCGACGTGGTTGCGAATATGGCTAATGTCGCCCAATTAGTTGCGTCAGTTT TAATGAATGACCTAGACTTATTCTCAAGGGTTATCACAAATGATAGGGTTGCAATGCCCTACAGGGTTAAGGCTTATGAG CATTGGGGTGTTGTTAAGAGTGTGCTTGAGAATCATGGCGCCTTAGGCGTAATATTAAGTGGAGCTGGGCCATCCATAGC GGCTTTCTTTAAGGAGAAGCCTCAGGTTAATGAGATTAAAACCGAGTTAATGAGTGCTGGGTTAAGTCCAGTGGTTATTT TAACTAAGCCATCCAATGAGGGGGCTAGGGAAATTAATCATTATTAA
Upstream 100 bases:
>100_bases GGGGTAAGATTGAGGAGCTTTGGTCATACATTAAGGCTCATTTCGATGAATTAATGAGTAGGGTCGCCTCAGAGCAGGAG GAGCTTAGGGGTGATTCGGA
Downstream 100 bases:
>100_bases GTATACTTAATTTAACCAAGGTCTCAGTCTTCGGTACACCTCTCTCATCGTAGCCCCTTAACCTATAGTACTCCTTAATC ATGCTCATCCACTCCTCCTC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MGTEELIIEAPASIANLGPAFDVAALAINPPSDIVKVKVTDGDGVFIRNSGEYASSLPSEGNGNSAYLVATRAIELAGLR RRIEIEVIKRIKPASGLGSSGATSAAVAYALNKLLNLSLSEWDLVELASYGELASAGVRHMDNVAASLLGGLVLVNPVIR RVIRVNFPELSIVVVIEGSKPNTGFMRSILPKAYELSDVVANMANVAQLVASVLMNDLDLFSRVITNDRVAMPYRVKAYE HWGVVKSVLENHGALGVILSGAGPSIAAFFKEKPQVNEIKTELMSAGLSPVVILTKPSNEGAREINHY
Sequences:
>Translated_308_residues MGTEELIIEAPASIANLGPAFDVAALAINPPSDIVKVKVTDGDGVFIRNSGEYASSLPSEGNGNSAYLVATRAIELAGLR RRIEIEVIKRIKPASGLGSSGATSAAVAYALNKLLNLSLSEWDLVELASYGELASAGVRHMDNVAASLLGGLVLVNPVIR RVIRVNFPELSIVVVIEGSKPNTGFMRSILPKAYELSDVVANMANVAQLVASVLMNDLDLFSRVITNDRVAMPYRVKAYE HWGVVKSVLENHGALGVILSGAGPSIAAFFKEKPQVNEIKTELMSAGLSPVVILTKPSNEGAREINHY >Mature_307_residues GTEELIIEAPASIANLGPAFDVAALAINPPSDIVKVKVTDGDGVFIRNSGEYASSLPSEGNGNSAYLVATRAIELAGLRR RIEIEVIKRIKPASGLGSSGATSAAVAYALNKLLNLSLSEWDLVELASYGELASAGVRHMDNVAASLLGGLVLVNPVIRR VIRVNFPELSIVVVIEGSKPNTGFMRSILPKAYELSDVVANMANVAQLVASVLMNDLDLFSRVITNDRVAMPYRVKAYEH WGVVKSVLENHGALGVILSGAGPSIAAFFKEKPQVNEIKTELMSAGLSPVVILTKPSNEGAREINHY
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=279, Percent_Identity=28.673835125448, Blast_Score=98, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 32715; Mature: 32584
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTEELIIEAPASIANLGPAFDVAALAINPPSDIVKVKVTDGDGVFIRNSGEYASSLPSE CCCCCEEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCHHHCCCCC GNGNSAYLVATRAIELAGLRRRIEIEVIKRIKPASGLGSSGATSAAVAYALNKLLNLSLS CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC EWDLVELASYGELASAGVRHMDNVAASLLGGLVLVNPVIRRVIRVNFPELSIVVVIEGSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC PNTGFMRSILPKAYELSDVVANMANVAQLVASVLMNDLDLFSRVITNDRVAMPYRVKAYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHH HWGVVKSVLENHGALGVILSGAGPSIAAFFKEKPQVNEIKTELMSAGLSPVVILTKPSNE HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCC GAREINHY CCHHCCCC >Mature Secondary Structure GTEELIIEAPASIANLGPAFDVAALAINPPSDIVKVKVTDGDGVFIRNSGEYASSLPSE CCCCEEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCHHHCCCCC GNGNSAYLVATRAIELAGLRRRIEIEVIKRIKPASGLGSSGATSAAVAYALNKLLNLSLS CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC EWDLVELASYGELASAGVRHMDNVAASLLGGLVLVNPVIRRVIRVNFPELSIVVVIEGSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC PNTGFMRSILPKAYELSDVVANMANVAQLVASVLMNDLDLFSRVITNDRVAMPYRVKAYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHH HWGVVKSVLENHGALGVILSGAGPSIAAFFKEKPQVNEIKTELMSAGLSPVVILTKPSNE HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCC GAREINHY CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA