| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040806
Identifier: 159040806
GI number: 159040806
Start: 255718
End: 256056
Strand: Reverse
Name: 159040806
Synonym: Cmaq_0219
Alternate gene names: NA
Gene position: 256056-255718 (Counterclockwise)
Preceding gene: 159040807
Following gene: 159040805
Centisome position: 12.32
GC content: 40.41
Gene sequence:
>339_bases ATGGGATTAAGCATTAATAGGGGATTTAAGTGTATCTGGATTATGAGGGTTATAGTGCTTGGTGATGAGGATACAGTTAA TGCGTTTAGGTTAATTGGATTCGAAGGCTATGTAGTGGACCCTAAGTCACTTGTACCTAGGATTAAGGAGTTCATGAGTA TGGATGATGTCGCCGCAATACTTGTTACAAGTAATGTAAGTGGTGAGGCTGGTCAAGAGTTCATTAACCTAAGGACAAGG GTTAGGAAACCACTAATACTTGAGGTACCTGCCTTGAGCAGTGGTGAGAGTAAGGAGGTTAACTACATGGCAATACTTAG ATCAGTGTTAGGTATTTAA
Upstream 100 bases:
>100_bases TTATCTAGGCTTGTTGATTCAAGGTATCTACCATTGGCTGCATTAACCATAGTGTTAACATTAATGGTCTACTACATATC AATAAGCATTGTGTAGTTTC
Downstream 100 bases:
>100_bases GCCCCATACTGGTTACTCGGCGTAGTCTTAACTCATTTAATGATTCATGCATTGTGAATAATAAACGAAACCATGTACTC AATGTTAAGATAGTTAGCGT
Product: vacuolar H+transporting two-sector ATPase F subunit
Products: ADP; phosphate; H+
Alternate protein names: Vacuolar H+Transporting Two-Sector ATPase F Subunit; Vacuolar H+-Transporting Two-Sector ATPase F Subunit
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MGLSINRGFKCIWIMRVIVLGDEDTVNAFRLIGFEGYVVDPKSLVPRIKEFMSMDDVAAILVTSNVSGEAGQEFINLRTR VRKPLILEVPALSSGESKEVNYMAILRSVLGI
Sequences:
>Translated_112_residues MGLSINRGFKCIWIMRVIVLGDEDTVNAFRLIGFEGYVVDPKSLVPRIKEFMSMDDVAAILVTSNVSGEAGQEFINLRTR VRKPLILEVPALSSGESKEVNYMAILRSVLGI >Mature_111_residues GLSINRGFKCIWIMRVIVLGDEDTVNAFRLIGFEGYVVDPKSLVPRIKEFMSMDDVAAILVTSNVSGEAGQEFINLRTRV RKPLILEVPALSSGESKEVNYMAILRSVLGI
Specific function: Unknown
COG id: COG1436
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.3.14
Molecular weight: Translated: 12417; Mature: 12286
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSINRGFKCIWIMRVIVLGDEDTVNAFRLIGFEGYVVDPKSLVPRIKEFMSMDDVAAI CCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHCCCCCEEE LVTSNVSGEAGQEFINLRTRVRKPLILEVPALSSGESKEVNYMAILRSVLGI EEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GLSINRGFKCIWIMRVIVLGDEDTVNAFRLIGFEGYVVDPKSLVPRIKEFMSMDDVAAI CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHCCCCCEEE LVTSNVSGEAGQEFINLRTRVRKPLILEVPALSSGESKEVNYMAILRSVLGI EEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA