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The map label for this gene is 159040740

Identifier: 159040740

GI number: 159040740

Start: 179001

End: 179750

Strand: Reverse

Name: 159040740

Synonym: Cmaq_0152

Alternate gene names: NA

Gene position: 179750-179001 (Counterclockwise)

Preceding gene: 159040742

Following gene: 159040736

Centisome position: 8.65

GC content: 41.6

Gene sequence:

>750_bases
ATGATGGATGATTACGTTAACTCATTGTTAAGGATGATTGGTTTATCTAAGTATCAGCTTAGGGTGTACTTGACCTTGGT
TGAGAGGGGGCCTTTAACGGCTGGTTTAATAGCGAAGTACGCTGATGTGCCTTCATCTAAAGTTTACAGTGTTTTAAAGA
GCATGGTTAGGTTGGGTTTGATTGATGTTGATTCAGGTAAGAGGCCTGAGGTTTTCGTGGCTAAGCCACCTAAGGAGATG
TTTAATATTGTGGTATCTAGGATTAATGATATTGTCGAGAAGGCTAAGCCCATGATTAATACCCTTCAGATGATTTATGA
GGCTTCAAACCAAAGGACGATTAAAGCTAGGAGTGAAATGCTCTTCACTGTTAAGGGGCTTCAGAACACTAAGAATTTAG
CCAGGGTGATTATGCTGGGTAATGTGAAGGAGGTTAGTGTTGCAATACCATATAGCCAGCTTCTTGATGATGAGGTTGCC
TCAATGATTATTGAGGCCACGGAGAAGTCTGAGGTTAAGTTACTTGTTACAAGGGATCTAGTTGATTACGCTAAGACCCT
ACCACCCAGGGTTAGTCTTAGGGTTAGGGATATGATGTTCGGCGCAGGCTTCATTGGGGATGGAGTATTATTAACTATTC
AATATGGTGCCGACTACCTATCACTATACTCCACTCAGGAGTATATTATTGAGATAGCTAAGACGTACTTTGAAACCCTA
TGGAGGGAGTCAGAGCCCATTAATAGGTAA

Upstream 100 bases:

>100_bases
GGTAAAAATCGGTTTTCTTAATTATAAATAAGTAATTTATGCTAACTTTAGCCTTAGGTTTTTAAGTGGTATTGTATTGT
GGTGTTGGGGGTTTAACTTA

Downstream 100 bases:

>100_bases
GGATTAATACGGGGAATACACCTACTTCCTGATTATTCTCTCCATTACCTCAACTAGCCTAGGGGCTGGGTTATTCATGG
TTACTGACGCTAACTCCTGC

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MMDDYVNSLLRMIGLSKYQLRVYLTLVERGPLTAGLIAKYADVPSSKVYSVLKSMVRLGLIDVDSGKRPEVFVAKPPKEM
FNIVVSRINDIVEKAKPMINTLQMIYEASNQRTIKARSEMLFTVKGLQNTKNLARVIMLGNVKEVSVAIPYSQLLDDEVA
SMIIEATEKSEVKLLVTRDLVDYAKTLPPRVSLRVRDMMFGAGFIGDGVLLTIQYGADYLSLYSTQEYIIEIAKTYFETL
WRESEPINR

Sequences:

>Translated_249_residues
MMDDYVNSLLRMIGLSKYQLRVYLTLVERGPLTAGLIAKYADVPSSKVYSVLKSMVRLGLIDVDSGKRPEVFVAKPPKEM
FNIVVSRINDIVEKAKPMINTLQMIYEASNQRTIKARSEMLFTVKGLQNTKNLARVIMLGNVKEVSVAIPYSQLLDDEVA
SMIIEATEKSEVKLLVTRDLVDYAKTLPPRVSLRVRDMMFGAGFIGDGVLLTIQYGADYLSLYSTQEYIIEIAKTYFETL
WRESEPINR
>Mature_249_residues
MMDDYVNSLLRMIGLSKYQLRVYLTLVERGPLTAGLIAKYADVPSSKVYSVLKSMVRLGLIDVDSGKRPEVFVAKPPKEM
FNIVVSRINDIVEKAKPMINTLQMIYEASNQRTIKARSEMLFTVKGLQNTKNLARVIMLGNVKEVSVAIPYSQLLDDEVA
SMIIEATEKSEVKLLVTRDLVDYAKTLPPRVSLRVRDMMFGAGFIGDGVLLTIQYGADYLSLYSTQEYIIEIAKTYFETL
WRESEPINR

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28192; Mature: 28192

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDDYVNSLLRMIGLSKYQLRVYLTLVERGPLTAGLIAKYADVPSSKVYSVLKSMVRLGL
CCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
IDVDSGKRPEVFVAKPPKEMFNIVVSRINDIVEKAKPMINTLQMIYEASNQRTIKARSEM
EECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LFTVKGLQNTKNLARVIMLGNVKEVSVAIPYSQLLDDEVASMIIEATEKSEVKLLVTRDL
EEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
VDYAKTLPPRVSLRVRDMMFGAGFIGDGVLLTIQYGADYLSLYSTQEYIIEIAKTYFETL
HHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
WRESEPINR
HCCCCCCCC
>Mature Secondary Structure
MMDDYVNSLLRMIGLSKYQLRVYLTLVERGPLTAGLIAKYADVPSSKVYSVLKSMVRLGL
CCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
IDVDSGKRPEVFVAKPPKEMFNIVVSRINDIVEKAKPMINTLQMIYEASNQRTIKARSEM
EECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LFTVKGLQNTKNLARVIMLGNVKEVSVAIPYSQLLDDEVASMIIEATEKSEVKLLVTRDL
EEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
VDYAKTLPPRVSLRVRDMMFGAGFIGDGVLLTIQYGADYLSLYSTQEYIIEIAKTYFETL
HHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
WRESEPINR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA