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The map label for this gene is 159040704

Identifier: 159040704

GI number: 159040704

Start: 137375

End: 137923

Strand: Reverse

Name: 159040704

Synonym: Cmaq_0112

Alternate gene names: NA

Gene position: 137923-137375 (Counterclockwise)

Preceding gene: 159040706

Following gene: 159040701

Centisome position: 6.64

GC content: 46.27

Gene sequence:

>549_bases
ATGGTAGTTACGTGTGACATATGTGGGAGGGAAATAAACGGTGAACCCATAGTTGTTGAAATAGATGGAGCCGTATTAAC
GCTATGTCAACGCTGCGCCTCCCGTTACGCTAACGTTAAGGGTGTTAGGGTGGTTTCAGGCGTTATTCAACAAACCCCAA
GTGGTCAAACGACGATTAAGCCAAGGCAGAGGTACATAACCCCCGTTAGGCAGGTTAAGAGACGTAATGAGGTTAATGTT
AATCAAGCGGAGAGGCTTGAGGTTATTGATAATTACGGTGAGGTGATTAAGGATGCTAGAAGCAGGTTAGGTATGAGTAG
GGACGTATTAGCAAGCATGCTTGGTATAAAGGAGAGCACGCTTAGGAATATTGAGGATGGTAAACTAATCCCCGATATTA
ACCTAGCCAGGAAAATGGAGAAGGTCCTGGGGATTAAGCTACTTGTTGAGAGGGAGGAGGCTGAAATGGAGTTTGGTGAA
TCAGGGGGCGGTGAGGTAACGTTAGGTGATGTGGTTGAGATTAGGAGGAAGGATAAGGAGGGGCAGTAG

Upstream 100 bases:

>100_bases
TTTTAATTATGAATTTAAAGTTAAGCCTTAATCCCTATTAAAGGAATTATCGCTCATTGGTAGCAAAAGGTTAATATACT
ACGCTACATTACTAAGAAGT

Downstream 100 bases:

>100_bases
CCTTACTGCCCACCGTTCCTGTGATTAACGTTATTAACCCTAATTGGGTTACCTAACCATTGCCTATACATGTTGTCAAT
CTTCAAGTCAATTATTTTTA

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcription Factor; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Protein; Transcriptional Regulator Xre Family; Multiprotein Bridging Factor

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVVTCDICGREINGEPIVVEIDGAVLTLCQRCASRYANVKGVRVVSGVIQQTPSGQTTIKPRQRYITPVRQVKRRNEVNV
NQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKESTLRNIEDGKLIPDINLARKMEKVLGIKLLVEREEAEMEFGE
SGGGEVTLGDVVEIRRKDKEGQ

Sequences:

>Translated_182_residues
MVVTCDICGREINGEPIVVEIDGAVLTLCQRCASRYANVKGVRVVSGVIQQTPSGQTTIKPRQRYITPVRQVKRRNEVNV
NQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKESTLRNIEDGKLIPDINLARKMEKVLGIKLLVEREEAEMEFGE
SGGGEVTLGDVVEIRRKDKEGQ
>Mature_182_residues
MVVTCDICGREINGEPIVVEIDGAVLTLCQRCASRYANVKGVRVVSGVIQQTPSGQTTIKPRQRYITPVRQVKRRNEVNV
NQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKESTLRNIEDGKLIPDINLARKMEKVLGIKLLVEREEAEMEFGE
SGGGEVTLGDVVEIRRKDKEGQ

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20251; Mature: 20251

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTCDICGREINGEPIVVEIDGAVLTLCQRCASRYANVKGVRVVSGVIQQTPSGQTTIK
CEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PRQRYITPVRQVKRRNEVNVNQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKEST
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
LRNIEDGKLIPDINLARKMEKVLGIKLLVEREEAEMEFGESGGGEVTLGDVVEIRRKDKE
HCCCCCCCCCCCCHHHHHHHHHHHHHHEEECHHHHHHCCCCCCCEEEHHHHHHHHHHCCC
GQ
CC
>Mature Secondary Structure
MVVTCDICGREINGEPIVVEIDGAVLTLCQRCASRYANVKGVRVVSGVIQQTPSGQTTIK
CEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PRQRYITPVRQVKRRNEVNVNQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKEST
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
LRNIEDGKLIPDINLARKMEKVLGIKLLVEREEAEMEFGESGGGEVTLGDVVEIRRKDKE
HCCCCCCCCCCCCHHHHHHHHHHHHHHEEECHHHHHHCCCCCCCEEEHHHHHHHHHHCCC
GQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA