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The map label for this gene is 159040678

Identifier: 159040678

GI number: 159040678

Start: 102776

End: 104464

Strand: Reverse

Name: 159040678

Synonym: Cmaq_0086

Alternate gene names: NA

Gene position: 104464-102776 (Counterclockwise)

Preceding gene: 159040679

Following gene: 159040677

Centisome position: 5.03

GC content: 37.66

Gene sequence:

>1689_bases
ATGATAATGCTGGCGCTATTTATTGCAGCATTAATGCAACCTCAGTTGGTTAACGTGACCCCAGTATCCTTTAATATGAC
TATTGGTTCAGGAATGCCCATGTACGGTTTATTAATTAATCCTAATTCATCATACGTAATCTACCTTAATGGACCGGGGG
TGCTCTATATGGTGGCTAATTCATCATTAGTAGTTATGATTCATAACATGGTTCATGTGGTTAATGGCAGTGCTTCACTA
GTCATTAAGCAGGGTGAGTCGCGTGTATTATTCATTAATCATAATAATTACTCAGTTTACTTATTCTACATGTTTCAATA
TAATAGTTCCAGTGAAGCATTCTACTCCTATAACCCAATTGGGGTTGCTGACTACGGTGTGGCGTTATATTATGGTGAAC
CATTATTGGCTTACTCCTATGAAACAAGTGAAGTATTGGGTGTAGCCTTCATTAGGAGTCTTAATGTAACTGATGTTAGG
GGTGATTGCGGGGTTAAGGCTGGTGATGATTATGCTGATATTCAATTGAATTCAATAGTAAAGGCCGGTGACGGATACTA
TATAGTTCAAGATGTTGTTATACTTAATGGAACTGCAGCATCAATTGTTGATAATGTGTGGAACATAACATCACTCAACG
CCACCTTAAGTAATGTAATGGGTCTGGGATCCATAGGCGACTTCAATGGTCAACAATACTACGCGTACAGTAGGGTTATA
GGTGAATTAAAAACACCCTTTAACTTAACGTTAGCCATAATGGTTAGTGGGGTTAATTCAGCTCACTTAAGCTTCGGTTA
TGGTGTTCAAGGGTCATTAATATGGTTTGATAACGTTACATTGATTAATGCAGGTAAACCAAGCATCATCGTTAATGGTT
CAAGTTACGTTGAATTTGGTATACCTATTGACACTGAGTTAGTGTTAACTGGGCCAGTGTGTGGAATATGGGCTGTGGTT
AAAAGTGTTAATGCAACCTTCACGTTACTTCATAGGGTTAATGAATCATATTACCCGGCACCGTACACGTGGGGTATTGG
TACATTAACAGGTGAGGCTGTAGCTAATGCATCAGCCCTAGTGAGTAATGGTGTTAACGTTCAGATTACTGGCAGCGCCT
ACGAATACCCTGGACCATTATACTACTATGTGCCTGTCTTCATATCATTAATTAATGGATCGGAATTTATAATGGTTCCT
AAAGGATACATGCTTAATCTAACCCTAGGTAGATTAATTACCGGTAATTCATCAGTAATTAAACGCATTGAATTCGTGAT
TAATGAGACGCGTATTATTAATTCAAGTAGCGTAACTATTATTGTTAATGGGCCAACTGAGGTAAGGGTAATTTATAATC
AATTATTTGAAGTGAAGTTAATTGGGTTAAGCGGGAATGAGACGCCGTTAGTGTATTGGTATCCTAAGGGGTATGTGCTT
AAACTTAAGGAACCAAGGTACTTGGGTTTAATGGTGTTTAGAGGCTACTTACTTAACAATGGTACGCTAGTTAAGTATCC
TGAAGCTACATTGATAATTAATGGTTCATTAACAATTAAGGTACTGTGGGGTAATGAAGTGAGTATAGGTACCTTAACGG
TAATGTACCTGGTGTTTCCTGTATTATCATTATTAATGATTATGATATTGATTATGCTTACCCTAAGTGATGAAGGTAAT
CGTCATTAG

Upstream 100 bases:

>100_bases
CACCGGCATTAAGGGATATTATTAAATACTTTAATGAAGTCGTGTTACCGCTTACCACTAAGCATTAAAGTAATTTAAAC
ACAACCTAGCATGGTTAGTA

Downstream 100 bases:

>100_bases
GTAATGTGGCATTAATTTAAAACCGCGGGTACGCTTACTGTAGGTTAATGATTATTAGGAATGTTAAGGAGGAGGAGTGG
GATGAATTCATGAGACTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Thermopsin; Rmopsin

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MIMLALFIAALMQPQLVNVTPVSFNMTIGSGMPMYGLLINPNSSYVIYLNGPGVLYMVANSSLVVMIHNMVHVVNGSASL
VIKQGESRVLFINHNNYSVYLFYMFQYNSSSEAFYSYNPIGVADYGVALYYGEPLLAYSYETSEVLGVAFIRSLNVTDVR
GDCGVKAGDDYADIQLNSIVKAGDGYYIVQDVVILNGTAASIVDNVWNITSLNATLSNVMGLGSIGDFNGQQYYAYSRVI
GELKTPFNLTLAIMVSGVNSAHLSFGYGVQGSLIWFDNVTLINAGKPSIIVNGSSYVEFGIPIDTELVLTGPVCGIWAVV
KSVNATFTLLHRVNESYYPAPYTWGIGTLTGEAVANASALVSNGVNVQITGSAYEYPGPLYYYVPVFISLINGSEFIMVP
KGYMLNLTLGRLITGNSSVIKRIEFVINETRIINSSSVTIIVNGPTEVRVIYNQLFEVKLIGLSGNETPLVYWYPKGYVL
KLKEPRYLGLMVFRGYLLNNGTLVKYPEATLIINGSLTIKVLWGNEVSIGTLTVMYLVFPVLSLLMIMILIMLTLSDEGN
RH

Sequences:

>Translated_562_residues
MIMLALFIAALMQPQLVNVTPVSFNMTIGSGMPMYGLLINPNSSYVIYLNGPGVLYMVANSSLVVMIHNMVHVVNGSASL
VIKQGESRVLFINHNNYSVYLFYMFQYNSSSEAFYSYNPIGVADYGVALYYGEPLLAYSYETSEVLGVAFIRSLNVTDVR
GDCGVKAGDDYADIQLNSIVKAGDGYYIVQDVVILNGTAASIVDNVWNITSLNATLSNVMGLGSIGDFNGQQYYAYSRVI
GELKTPFNLTLAIMVSGVNSAHLSFGYGVQGSLIWFDNVTLINAGKPSIIVNGSSYVEFGIPIDTELVLTGPVCGIWAVV
KSVNATFTLLHRVNESYYPAPYTWGIGTLTGEAVANASALVSNGVNVQITGSAYEYPGPLYYYVPVFISLINGSEFIMVP
KGYMLNLTLGRLITGNSSVIKRIEFVINETRIINSSSVTIIVNGPTEVRVIYNQLFEVKLIGLSGNETPLVYWYPKGYVL
KLKEPRYLGLMVFRGYLLNNGTLVKYPEATLIINGSLTIKVLWGNEVSIGTLTVMYLVFPVLSLLMIMILIMLTLSDEGN
RH
>Mature_562_residues
MIMLALFIAALMQPQLVNVTPVSFNMTIGSGMPMYGLLINPNSSYVIYLNGPGVLYMVANSSLVVMIHNMVHVVNGSASL
VIKQGESRVLFINHNNYSVYLFYMFQYNSSSEAFYSYNPIGVADYGVALYYGEPLLAYSYETSEVLGVAFIRSLNVTDVR
GDCGVKAGDDYADIQLNSIVKAGDGYYIVQDVVILNGTAASIVDNVWNITSLNATLSNVMGLGSIGDFNGQQYYAYSRVI
GELKTPFNLTLAIMVSGVNSAHLSFGYGVQGSLIWFDNVTLINAGKPSIIVNGSSYVEFGIPIDTELVLTGPVCGIWAVV
KSVNATFTLLHRVNESYYPAPYTWGIGTLTGEAVANASALVSNGVNVQITGSAYEYPGPLYYYVPVFISLINGSEFIMVP
KGYMLNLTLGRLITGNSSVIKRIEFVINETRIINSSSVTIIVNGPTEVRVIYNQLFEVKLIGLSGNETPLVYWYPKGYVL
KLKEPRYLGLMVFRGYLLNNGTLVKYPEATLIINGSLTIKVLWGNEVSIGTLTVMYLVFPVLSLLMIMILIMLTLSDEGN
RH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61467; Mature: 61467

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMLALFIAALMQPQLVNVTPVSFNMTIGSGMPMYGLLINPNSSYVIYLNGPGVLYMVAN
CEEHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEC
SSLVVMIHNMVHVVNGSASLVIKQGESRVLFINHNNYSVYLFYMFQYNSSSEAFYSYNPI
CCEEEEEEEEEEEECCCEEEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCEEEEECCC
GVADYGVALYYGEPLLAYSYETSEVLGVAFIRSLNVTDVRGDCGVKAGDDYADIQLNSIV
CEECCCEEEEECCEEEEEECCCHHHHEEEHHEECCCEEECCCCCCCCCCCCCEEEEEEEE
KAGDGYYIVQDVVILNGTAASIVDNVWNITSLNATLSNVMGLGSIGDFNGQQYYAYSRVI
ECCCCEEEEEEEEEECCCHHHHHHHCCCEEECCHHHHHHHCCCCCCCCCCCEEEEEHHHH
GELKTPFNLTLAIMVSGVNSAHLSFGYGVQGSLIWFDNVTLINAGKPSIIVNGSSYVEFG
HHCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEECEEEEECCCCEEEECCCCEEEEC
IPIDTELVLTGPVCGIWAVVKSVNATFTLLHRVNESYYPAPYTWGIGTLTGEAVANASAL
CCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCCCHHHCCCHHH
VSNGVNVQITGSAYEYPGPLYYYVPVFISLINGSEFIMVPKGYMLNLTLGRLITGNSSVI
HCCCCEEEEECCCCCCCCCEEEEEEEHHEEECCCEEEEECCCEEEEEEEEEEEECCHHHH
KRIEFVINETRIINSSSVTIIVNGPTEVRVIYNQLFEVKLIGLSGNETPLVYWYPKGYVL
HHHHHEEECEEEEECCCEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCEEEECCCCEEE
KLKEPRYLGLMVFRGYLLNNGTLVKYPEATLIINGSLTIKVLWGNEVSIGTLTVMYLVFP
EECCCCEEEEEEEEEEEECCCEEEEECCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHH
VLSLLMIMILIMLTLSDEGNRH
HHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MIMLALFIAALMQPQLVNVTPVSFNMTIGSGMPMYGLLINPNSSYVIYLNGPGVLYMVAN
CEEHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEC
SSLVVMIHNMVHVVNGSASLVIKQGESRVLFINHNNYSVYLFYMFQYNSSSEAFYSYNPI
CCEEEEEEEEEEEECCCEEEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCEEEEECCC
GVADYGVALYYGEPLLAYSYETSEVLGVAFIRSLNVTDVRGDCGVKAGDDYADIQLNSIV
CEECCCEEEEECCEEEEEECCCHHHHEEEHHEECCCEEECCCCCCCCCCCCCEEEEEEEE
KAGDGYYIVQDVVILNGTAASIVDNVWNITSLNATLSNVMGLGSIGDFNGQQYYAYSRVI
ECCCCEEEEEEEEEECCCHHHHHHHCCCEEECCHHHHHHHCCCCCCCCCCCEEEEEHHHH
GELKTPFNLTLAIMVSGVNSAHLSFGYGVQGSLIWFDNVTLINAGKPSIIVNGSSYVEFG
HHCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEECEEEEECCCCEEEECCCCEEEEC
IPIDTELVLTGPVCGIWAVVKSVNATFTLLHRVNESYYPAPYTWGIGTLTGEAVANASAL
CCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCCCHHHCCCHHH
VSNGVNVQITGSAYEYPGPLYYYVPVFISLINGSEFIMVPKGYMLNLTLGRLITGNSSVI
HCCCCEEEEECCCCCCCCCEEEEEEEHHEEECCCEEEEECCCEEEEEEEEEEEECCHHHH
KRIEFVINETRIINSSSVTIIVNGPTEVRVIYNQLFEVKLIGLSGNETPLVYWYPKGYVL
HHHHHEEECEEEEECCCEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCEEEECCCCEEE
KLKEPRYLGLMVFRGYLLNNGTLVKYPEATLIINGSLTIKVLWGNEVSIGTLTVMYLVFP
EECCCCEEEEEEEEEEEECCCEEEEECCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHH
VLSLLMIMILIMLTLSDEGNRH
HHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA