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The map label for this gene is rps24e [H]

Identifier: 159040596

GI number: 159040596

Start: 14977

End: 15444

Strand: Reverse

Name: rps24e [H]

Synonym: Cmaq_0004

Alternate gene names: 159040596

Gene position: 15444-14977 (Counterclockwise)

Preceding gene: 159040597

Following gene: 159040595

Centisome position: 0.74

GC content: 47.86

Gene sequence:

>468_bases
ATGCACCTAAATTACTGGTGTTTAATGAGTAGTGGTGAAGAGCAGGGTAGGGAGCAGGCTGGGGGTGGTTTAGTAATCTC
ACCCCTACCTGAGGGTGTGGAGCCTGGTAAGGTTCAGGTTAAGGTTATTGAGCAGTTTAATAACCCACTGCTGCAGCGTA
AGGAGGTTAAGGCCATAGTCTATCACGTTGGTTTACCAACACCCCAGAGGCTTCAGTTAAGGGAGGAGTTAGCTAAGGCA
CTTGGCTCAAACCCGGAACTCACCTATGTGACGCACGTGTATACGCAGTATGGTGTCGGGGTCTCTAGGATTGAGGTCCA
CGTGTACTTTGATAAGAATACAGCTGAATTAGTTGAGCCACTCTATGTTAGGCTTAGGAATATGCCTAAGGATCAGGCTA
AGAAGATTAGGGATGAGTTGAAGAGTAGGAGGAAGTCTGAGAAGAAGCCTGCAGCCAAGGGTAAGTGA

Upstream 100 bases:

>100_bases
TAGCAGTGAATTATAATGCATTAAATGGGGTAAGTGGATCAATATATCCATCAACAGTCCCTGCATCAATCATATGGTGA
GGCTGGGTCAGAGTTTAAAA

Downstream 100 bases:

>100_bases
GCAATAGCGGAGGCGCCTCATTAAGCGCACTCATCGCAATAATGCTTAAATTAAGCACCCTGATTCAACTGCAATGAAGC
TGCAGGTACTGGTTATAGTC

Product: 30S ribosomal protein S24E-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MHLNYWCLMSSGEEQGREQAGGGLVISPLPEGVEPGKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKA
LGSNPELTYVTHVYTQYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKKPAAKGK

Sequences:

>Translated_155_residues
MHLNYWCLMSSGEEQGREQAGGGLVISPLPEGVEPGKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKA
LGSNPELTYVTHVYTQYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKKPAAKGK
>Mature_155_residues
MHLNYWCLMSSGEEQGREQAGGGLVISPLPEGVEPGKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKA
LGSNPELTYVTHVYTQYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKKPAAKGK

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- ProDom:   PD006052 [H]

Pfam domain/function: PF01282 Ribosomal_S24e [H]

EC number: NA

Molecular weight: Translated: 17593; Mature: 17593

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLNYWCLMSSGEEQGREQAGGGLVISPLPEGVEPGKVQVKVIEQFNNPLLQRKEVKAIV
CCCEEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHEE
YHVGLPTPQRLQLREELAKALGSNPELTYVTHVYTQYGVGVSRIEVHVYFDKNTAELVEP
EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCEEEEEEEEEECCCHHHHHHH
LYVRLRNMPKDQAKKIRDELKSRRKSEKKPAAKGK
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHLNYWCLMSSGEEQGREQAGGGLVISPLPEGVEPGKVQVKVIEQFNNPLLQRKEVKAIV
CCCEEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHEE
YHVGLPTPQRLQLREELAKALGSNPELTYVTHVYTQYGVGVSRIEVHVYFDKNTAELVEP
EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCEEEEEEEEEECCCHHHHHHH
LYVRLRNMPKDQAKKIRDELKSRRKSEKKPAAKGK
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA