| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040594
Identifier: 159040594
GI number: 159040594
Start: 9055
End: 11400
Strand: Reverse
Name: 159040594
Synonym: Cmaq_0002
Alternate gene names: NA
Gene position: 11400-9055 (Counterclockwise)
Preceding gene: 159040595
Following gene: 159040593
Centisome position: 0.55
GC content: 46.5
Gene sequence:
>2346_bases ATGGATTATAGATTCAGTAAAGGGGGTAAAATAGCTGCAATACTAGTGGCTGTAACAGTGGCTATAGTCATCTCACTATA CGTGGTTAACGCTCAATCACCTGATCAACCAAACCCATACTACCTGGGCTCAGAGGTGTTTTGCATAGAATATGGAATTA TTGCACCTAATGGGACCTTTATACCGTTACCCTACCCAACAAGCCTAATAACGTTCCTATACCTAAACAACGCCACAGGC TTAGGTAACGTGCTTTATAGTGAGTACTATAATCCCTCAAGCCCACTATACCACAGGTTCATATCAGCGGCTGAATTCGA TGAATGGTACTCAGCGCCAGCAAGCGTCTACGGTAACTTAACGGCAATATACAGTTACTATAACTTAACCACGGAGGTTA AGTCAGCACCAATGTATGCTGCATTAGGTGTGCAGAGTAATGCTTACAACGCCTGCATATCAATAATTAACGCGACGATA GAGTACTTCATTTACAATAATGCTTCGTTTTCATGGGTTAGTTGGGTGTTGGTTACTGAGACTAATCCACAGGGCTTCTT CCTTGAAATAACACCCGGTGAGTTTCAGCAGTTGCTTAAGACCGTTGAATCTATTAATAATAACACTGGTGTAATCCAAC TACCGGTAACTTATAAGGGTCAACCAGTCTTAATGAAGTATGCCGTCTACGTGAGGGGTAGCCACGGTTACAGTGTTGGC CACGCCTTAGCCCTATACCTGGCTAGGGAGTTTCAGGTGCAGCCTAGCTACAGTATGATTAAGCCCAGTGGCGTTGTCTC AAAGTCACCGCTGGTGATTAACGGTAAGCCTGTTGCTGTTCAATTGGAGGCTCAAAGCGCCTTAGCCAACTCAGCGTTAA ATAAGCCCAGTGAATTCATACTGCAATTCCCAATAGAAGTATACCTACCCCAGGGTATTGAGCTACTTTACAATGCCACA CCACTGTACCCGCTTTGGTTCATTGGTGATTACAACGGTTACAACGGTTCATCAGTTACCGTGGGTATAGTTGACGCCTT CGGTGACGCTGAGAGTCATTTAGTTAACGGATTCTGCGGCTACGCCTTATCACCGTACAACGATATAATAGTTAGTGATG TTAATGCATTCTCATCACTCTTCGACCTACCTCCAGCGAGTATTACAGTAATATACCCGGCTGGTGAACCATTCATCACT CCGTTTAACAGCGTTGATGCTTGCGGTTGGTCCTTTGAATCAGTCCTCGATAATGAGTGGGTTCACGCAATAGCCCCAGG GGCCAGGATAGTCTTCGGGGTGTCCCCTGATGCTGGGGATGACTTATACGTTACCATTGAGTACATGGTTAATGAGAGCC TAGTTAACTTCATTAGCCTAAGCTGGGGTTTATCAGAGGACTACCTTGACCCATACTATGCCTTAGCCTACGATCAAATA TTCATGCAGGCAGCGGCACAGGGCATTGGTGTATTCGCCTCCTCCGGTGACTCTGGTGCCTACGAGTTCTACCCATTCGT CTCAGCCTTCCACCCATCCATTGACCCATGGGTCACTGGGGTTGGTGGAACAACAAGCTACCTGTTCCCAGGTGGATCAA GGTTCATTACCGCGTGGAGCTTCTACAGCTTCGGCCTACCTCCATGGGACTTAATATATTGGGGGAGTGGCGGTGGTTAC TCAATATTCTTCGATATGCCGCTCTACCAGTACCAGTACATATTCAACCTAATAGGTGAGGGTAATTTCTATGAGCAAAC CCAGTTCCAGCCATTAATATGGGGTCTATTGCTTGGTCAATTCTTCGTTAATGAACCCTACGTACCCACACTCAACATTA ACCCATACACGCCCCTCTACAGGACCTTTGAGTGGATGCTTTATCCAAGCCTATACGTACCCATTGGCGCTAAGGGTTAC CCAATAGTCTCAGCTGACGCTAATCCATATACAGGTGTGTTGATAGTGATTGATGGTGAACTTAACCCATTCATATGGGG TGGCACTAGCCTGGCGTCACCATTAACCATGGGTATGGTTGCCCTATGGCAGGACTACTTGAATAAAGCCGGCATACCTT ACCAAGTAGGCTTAGCCGCAGTGCCATTAAGCCAAATATGGGCCACTGAGGCTGGTTCAAGCTTCTGCAACGCCTACTAC CCAACATCAGTCTACGGCACAAACACCCACGGTGTCTTCTACCCATCAATATATGGTCAAAACGGCGCCACGGCTGTGAA TGGTTGGGTTATTAAGAATCCATGCATCTGGAACCCTGTCAATGGTTTTGGTTCACTAGACGTGGGTAACCTGGTGTACT ACGGTACGCAACTGCTTGACAAGTAA
Upstream 100 bases:
>100_bases CAGTTACAGTGGTATTATTAATTGTATTGAGTAGAAGATTAAGGTAACGCTGAAGCTATAGGTGAATTTTTAAAAAACCT ACAGTGGGTTTAAGTAATTC
Downstream 100 bases:
>100_bases TTAAAGTGAACTACCTTTAAAATAATTAAACCATTTTCTTCAAACTGAATCACTCCTCCGGCTTAAGCCCATGTGTGATT AAGCCGTATTGATGTTAATT
Product: protease-like protein
Products: NA
Alternate protein names: Serine Protease; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Pseudomonapepsin; Protease-Like Protein; Protease Related Protein; Physarolisin II; Membrane Associated Serine Protease; Serine Protease Subtilase Family; Peptidase S8 Or; Peptidase S8 And S; Xanthomonapepsin Related Protein; Pro-Kumamolisin Activation Domain-Containing Protein; Periplasmic Aspartyl Protease; Serine Protease Kumamolysin; Pro-Kumamolisin Activation Domain Protein
Number of amino acids: Translated: 781; Mature: 781
Protein sequence:
>781_residues MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTFIPLPYPTSLITFLYLNNATG LGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNLTAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATI EYFIYNNASFSWVSWVLVTETNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFILQFPIEVYLPQGIELLYNAT PLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCGYALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFIT PFNSVDACGWSFESVLDNEWVHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWSFYSFGLPPWDLIYWGSGGGY SIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQFFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGY PIVSADANPYTGVLIVIDGELNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLDK
Sequences:
>Translated_781_residues MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTFIPLPYPTSLITFLYLNNATG LGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNLTAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATI EYFIYNNASFSWVSWVLVTETNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFILQFPIEVYLPQGIELLYNAT PLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCGYALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFIT PFNSVDACGWSFESVLDNEWVHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWSFYSFGLPPWDLIYWGSGGGY SIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQFFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGY PIVSADANPYTGVLIVIDGELNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLDK >Mature_781_residues MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTFIPLPYPTSLITFLYLNNATG LGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNLTAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATI EYFIYNNASFSWVSWVLVTETNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFILQFPIEVYLPQGIELLYNAT PLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCGYALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFIT PFNSVDACGWSFESVLDNEWVHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWSFYSFGLPPWDLIYWGSGGGY SIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQFFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGY PIVSADANPYTGVLIVIDGELNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLDK
Specific function: Unknown
COG id: COG4934
COG function: function code O; Predicted protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85889; Mature: 85889
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTF CCCEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCEEEEEEEEEECCCCCE IPLPYPTSLITFLYLNNATGLGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNL EECCCCHHEEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCE TAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATIEYFIYNNASFSWVSWVLVTE EEEEEEHEEEEHHCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEE TNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG CCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCHH HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFI HHHHHHHHHHEECCCCCCEECCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHCCCCCCEE LQFPIEVYLPQGIELLYNATPLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCG EECCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHC YALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFITPFNSVDACGWSFESVLDNEW CCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCC VHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI EEEECCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWS HHHHHHCCCEEEEECCCCCCEEEEHHHHHHCCCCCCEEECCCCCEEEEECCCCEEEEEEE FYSFGLPPWDLIYWGSGGGYSIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQ EHCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH FFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGYPIVSADANPYTGVLIVIDGE HHCCCCCCEEEECCCCCHHHHHHHEEECCEEEEEECCCCCEEEECCCCCCEEEEEEECCC LNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY CCCEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEECEECCCHHHHHHHCCCCCHHCCCC PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLD CCEEECCCCCCEEECEEECCCCCEEECCEEEECCEECCCCCCCCCCCCCCCCEECHHHHC K C >Mature Secondary Structure MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTF CCCEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCEEEEEEEEEECCCCCE IPLPYPTSLITFLYLNNATGLGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNL EECCCCHHEEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCE TAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATIEYFIYNNASFSWVSWVLVTE EEEEEEHEEEEHHCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEE TNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG CCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCHH HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFI HHHHHHHHHHEECCCCCCEECCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHCCCCCCEE LQFPIEVYLPQGIELLYNATPLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCG EECCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHC YALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFITPFNSVDACGWSFESVLDNEW CCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCC VHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI EEEECCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWS HHHHHHCCCEEEEECCCCCCEEEEHHHHHHCCCCCCEEECCCCCEEEEECCCCEEEEEEE FYSFGLPPWDLIYWGSGGGYSIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQ EHCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH FFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGYPIVSADANPYTGVLIVIDGE HHCCCCCCEEEECCCCCHHHHHHHEEECCEEEEEECCCCCEEEECCCCCCEEEEEEECCC LNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY CCCEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEECEECCCHHHHHHHCCCCCHHCCCC PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLD CCEEECCCCCCEEECEEECCCCCEEECCEEEECCEECCCCCCCCCCCCCCCCEECHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA