Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159040594

Identifier: 159040594

GI number: 159040594

Start: 9055

End: 11400

Strand: Reverse

Name: 159040594

Synonym: Cmaq_0002

Alternate gene names: NA

Gene position: 11400-9055 (Counterclockwise)

Preceding gene: 159040595

Following gene: 159040593

Centisome position: 0.55

GC content: 46.5

Gene sequence:

>2346_bases
ATGGATTATAGATTCAGTAAAGGGGGTAAAATAGCTGCAATACTAGTGGCTGTAACAGTGGCTATAGTCATCTCACTATA
CGTGGTTAACGCTCAATCACCTGATCAACCAAACCCATACTACCTGGGCTCAGAGGTGTTTTGCATAGAATATGGAATTA
TTGCACCTAATGGGACCTTTATACCGTTACCCTACCCAACAAGCCTAATAACGTTCCTATACCTAAACAACGCCACAGGC
TTAGGTAACGTGCTTTATAGTGAGTACTATAATCCCTCAAGCCCACTATACCACAGGTTCATATCAGCGGCTGAATTCGA
TGAATGGTACTCAGCGCCAGCAAGCGTCTACGGTAACTTAACGGCAATATACAGTTACTATAACTTAACCACGGAGGTTA
AGTCAGCACCAATGTATGCTGCATTAGGTGTGCAGAGTAATGCTTACAACGCCTGCATATCAATAATTAACGCGACGATA
GAGTACTTCATTTACAATAATGCTTCGTTTTCATGGGTTAGTTGGGTGTTGGTTACTGAGACTAATCCACAGGGCTTCTT
CCTTGAAATAACACCCGGTGAGTTTCAGCAGTTGCTTAAGACCGTTGAATCTATTAATAATAACACTGGTGTAATCCAAC
TACCGGTAACTTATAAGGGTCAACCAGTCTTAATGAAGTATGCCGTCTACGTGAGGGGTAGCCACGGTTACAGTGTTGGC
CACGCCTTAGCCCTATACCTGGCTAGGGAGTTTCAGGTGCAGCCTAGCTACAGTATGATTAAGCCCAGTGGCGTTGTCTC
AAAGTCACCGCTGGTGATTAACGGTAAGCCTGTTGCTGTTCAATTGGAGGCTCAAAGCGCCTTAGCCAACTCAGCGTTAA
ATAAGCCCAGTGAATTCATACTGCAATTCCCAATAGAAGTATACCTACCCCAGGGTATTGAGCTACTTTACAATGCCACA
CCACTGTACCCGCTTTGGTTCATTGGTGATTACAACGGTTACAACGGTTCATCAGTTACCGTGGGTATAGTTGACGCCTT
CGGTGACGCTGAGAGTCATTTAGTTAACGGATTCTGCGGCTACGCCTTATCACCGTACAACGATATAATAGTTAGTGATG
TTAATGCATTCTCATCACTCTTCGACCTACCTCCAGCGAGTATTACAGTAATATACCCGGCTGGTGAACCATTCATCACT
CCGTTTAACAGCGTTGATGCTTGCGGTTGGTCCTTTGAATCAGTCCTCGATAATGAGTGGGTTCACGCAATAGCCCCAGG
GGCCAGGATAGTCTTCGGGGTGTCCCCTGATGCTGGGGATGACTTATACGTTACCATTGAGTACATGGTTAATGAGAGCC
TAGTTAACTTCATTAGCCTAAGCTGGGGTTTATCAGAGGACTACCTTGACCCATACTATGCCTTAGCCTACGATCAAATA
TTCATGCAGGCAGCGGCACAGGGCATTGGTGTATTCGCCTCCTCCGGTGACTCTGGTGCCTACGAGTTCTACCCATTCGT
CTCAGCCTTCCACCCATCCATTGACCCATGGGTCACTGGGGTTGGTGGAACAACAAGCTACCTGTTCCCAGGTGGATCAA
GGTTCATTACCGCGTGGAGCTTCTACAGCTTCGGCCTACCTCCATGGGACTTAATATATTGGGGGAGTGGCGGTGGTTAC
TCAATATTCTTCGATATGCCGCTCTACCAGTACCAGTACATATTCAACCTAATAGGTGAGGGTAATTTCTATGAGCAAAC
CCAGTTCCAGCCATTAATATGGGGTCTATTGCTTGGTCAATTCTTCGTTAATGAACCCTACGTACCCACACTCAACATTA
ACCCATACACGCCCCTCTACAGGACCTTTGAGTGGATGCTTTATCCAAGCCTATACGTACCCATTGGCGCTAAGGGTTAC
CCAATAGTCTCAGCTGACGCTAATCCATATACAGGTGTGTTGATAGTGATTGATGGTGAACTTAACCCATTCATATGGGG
TGGCACTAGCCTGGCGTCACCATTAACCATGGGTATGGTTGCCCTATGGCAGGACTACTTGAATAAAGCCGGCATACCTT
ACCAAGTAGGCTTAGCCGCAGTGCCATTAAGCCAAATATGGGCCACTGAGGCTGGTTCAAGCTTCTGCAACGCCTACTAC
CCAACATCAGTCTACGGCACAAACACCCACGGTGTCTTCTACCCATCAATATATGGTCAAAACGGCGCCACGGCTGTGAA
TGGTTGGGTTATTAAGAATCCATGCATCTGGAACCCTGTCAATGGTTTTGGTTCACTAGACGTGGGTAACCTGGTGTACT
ACGGTACGCAACTGCTTGACAAGTAA

Upstream 100 bases:

>100_bases
CAGTTACAGTGGTATTATTAATTGTATTGAGTAGAAGATTAAGGTAACGCTGAAGCTATAGGTGAATTTTTAAAAAACCT
ACAGTGGGTTTAAGTAATTC

Downstream 100 bases:

>100_bases
TTAAAGTGAACTACCTTTAAAATAATTAAACCATTTTCTTCAAACTGAATCACTCCTCCGGCTTAAGCCCATGTGTGATT
AAGCCGTATTGATGTTAATT

Product: protease-like protein

Products: NA

Alternate protein names: Serine Protease; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Pseudomonapepsin; Protease-Like Protein; Protease Related Protein; Physarolisin II; Membrane Associated Serine Protease; Serine Protease Subtilase Family; Peptidase S8 Or; Peptidase S8 And S; Xanthomonapepsin Related Protein; Pro-Kumamolisin Activation Domain-Containing Protein; Periplasmic Aspartyl Protease; Serine Protease Kumamolysin; Pro-Kumamolisin Activation Domain Protein

Number of amino acids: Translated: 781; Mature: 781

Protein sequence:

>781_residues
MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTFIPLPYPTSLITFLYLNNATG
LGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNLTAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATI
EYFIYNNASFSWVSWVLVTETNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG
HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFILQFPIEVYLPQGIELLYNAT
PLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCGYALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFIT
PFNSVDACGWSFESVLDNEWVHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI
FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWSFYSFGLPPWDLIYWGSGGGY
SIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQFFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGY
PIVSADANPYTGVLIVIDGELNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY
PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLDK

Sequences:

>Translated_781_residues
MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTFIPLPYPTSLITFLYLNNATG
LGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNLTAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATI
EYFIYNNASFSWVSWVLVTETNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG
HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFILQFPIEVYLPQGIELLYNAT
PLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCGYALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFIT
PFNSVDACGWSFESVLDNEWVHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI
FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWSFYSFGLPPWDLIYWGSGGGY
SIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQFFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGY
PIVSADANPYTGVLIVIDGELNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY
PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLDK
>Mature_781_residues
MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTFIPLPYPTSLITFLYLNNATG
LGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNLTAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATI
EYFIYNNASFSWVSWVLVTETNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG
HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFILQFPIEVYLPQGIELLYNAT
PLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCGYALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFIT
PFNSVDACGWSFESVLDNEWVHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI
FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWSFYSFGLPPWDLIYWGSGGGY
SIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQFFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGY
PIVSADANPYTGVLIVIDGELNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY
PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLDK

Specific function: Unknown

COG id: COG4934

COG function: function code O; Predicted protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85889; Mature: 85889

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTF
CCCEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCEEEEEEEEEECCCCCE
IPLPYPTSLITFLYLNNATGLGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNL
EECCCCHHEEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCE
TAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATIEYFIYNNASFSWVSWVLVTE
EEEEEEHEEEEHHCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEE
TNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG
CCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCHH
HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFI
HHHHHHHHHHEECCCCCCEECCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHCCCCCCEE
LQFPIEVYLPQGIELLYNATPLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCG
EECCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHC
YALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFITPFNSVDACGWSFESVLDNEW
CCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCC
VHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI
EEEECCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH
FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWS
HHHHHHCCCEEEEECCCCCCEEEEHHHHHHCCCCCCEEECCCCCEEEEECCCCEEEEEEE
FYSFGLPPWDLIYWGSGGGYSIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQ
EHCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
FFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGYPIVSADANPYTGVLIVIDGE
HHCCCCCCEEEECCCCCHHHHHHHEEECCEEEEEECCCCCEEEECCCCCCEEEEEEECCC
LNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY
CCCEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEECEECCCHHHHHHHCCCCCHHCCCC
PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLD
CCEEECCCCCCEEECEEECCCCCEEECCEEEECCEECCCCCCCCCCCCCCCCEECHHHHC
K
C
>Mature Secondary Structure
MDYRFSKGGKIAAILVAVTVAIVISLYVVNAQSPDQPNPYYLGSEVFCIEYGIIAPNGTF
CCCEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCEEEEEEEEEECCCCCE
IPLPYPTSLITFLYLNNATGLGNVLYSEYYNPSSPLYHRFISAAEFDEWYSAPASVYGNL
EECCCCHHEEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCE
TAIYSYYNLTTEVKSAPMYAALGVQSNAYNACISIINATIEYFIYNNASFSWVSWVLVTE
EEEEEEHEEEEHHCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEE
TNPQGFFLEITPGEFQQLLKTVESINNNTGVIQLPVTYKGQPVLMKYAVYVRGSHGYSVG
CCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCHH
HALALYLAREFQVQPSYSMIKPSGVVSKSPLVINGKPVAVQLEAQSALANSALNKPSEFI
HHHHHHHHHHEECCCCCCEECCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHCCCCCCEE
LQFPIEVYLPQGIELLYNATPLYPLWFIGDYNGYNGSSVTVGIVDAFGDAESHLVNGFCG
EECCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHC
YALSPYNDIIVSDVNAFSSLFDLPPASITVIYPAGEPFITPFNSVDACGWSFESVLDNEW
CCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCC
VHAIAPGARIVFGVSPDAGDDLYVTIEYMVNESLVNFISLSWGLSEDYLDPYYALAYDQI
EEEECCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH
FMQAAAQGIGVFASSGDSGAYEFYPFVSAFHPSIDPWVTGVGGTTSYLFPGGSRFITAWS
HHHHHHCCCEEEEECCCCCCEEEEHHHHHHCCCCCCEEECCCCCEEEEECCCCEEEEEEE
FYSFGLPPWDLIYWGSGGGYSIFFDMPLYQYQYIFNLIGEGNFYEQTQFQPLIWGLLLGQ
EHCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
FFVNEPYVPTLNINPYTPLYRTFEWMLYPSLYVPIGAKGYPIVSADANPYTGVLIVIDGE
HHCCCCCCEEEECCCCCHHHHHHHEEECCEEEEEECCCCCEEEECCCCCCEEEEEEECCC
LNPFIWGGTSLASPLTMGMVALWQDYLNKAGIPYQVGLAAVPLSQIWATEAGSSFCNAYY
CCCEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEECEECCCHHHHHHHCCCCCHHCCCC
PTSVYGTNTHGVFYPSIYGQNGATAVNGWVIKNPCIWNPVNGFGSLDVGNLVYYGTQLLD
CCEEECCCCCCEEECEEECCCCCEEECCEEEECCEECCCCCCCCCCCCCCCCEECHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA