| Definition | Salinispora arenicola CNS-205 chromosome, complete genome. |
|---|---|
| Accession | NC_009953 |
| Length | 5,786,361 |
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Identifier: 159036485
GI number:
Start: 928810
End: 932466
Strand: Direct
Name: Not Available
Synonym: Sare_0829
Alternate gene names: NA
Gene position: NA
Preceding gene: 159036481
Following gene: 159036486
Centisome position: NA
GC content: NA
Gene sequence:
>3657_bases ATGCTCACCGGACTTTTCGTCGCCGCCCTCACCGACCCGGCCCTGGCCAGGGCCAGGGACCTGGCGCGGTCCGGCGCGGC CCAGGTCGACGGGCTCGACCTGACCGCACCGCCGGCGCTACGCCCCTTCGCGGTTGCCGCCATCGCGGCCGACGAGCCCG TGGGGGGCGCGGGACGCCCCGTGCTGGCGGTCACCGCGACCACCCGGGAGGCCGACGACCTGGCCGCCGCACTGGGCTGC CTGATCCCGGCCGACCAGGTGGCGGTCTTCCCATCCTGGGAGACGTTGCCGCACGAACGACTCTCGCCGCGTTCGGACAC GGTGGGTCGCCGGCTGGCTGTGCTCCGTCGCCTCGCCCACCCCGACGCGGCCGACTCGCAGGGGCGCCACGGCCCGCTGC GGGTGATCGTCGCTCCGGTCCGGTCCCTGCTGCAACCGCAGCTCAAGGGGCTGGGGGAGCTGGAGCCGGTGCGGCTGGCC GCCGGCGACGAGGCTGACCTCGAAGACCTGGCACGCCGGCTCACCGACCTGGCGTACGCGCGGGTGGACCTGGTCACCAA GCGCGGTGAGTTCGCGGTGCGCGGCGGTATTCTGGACGTCTTCCCGCCCACCGACGAGCATCCAGCCCGGGTCGAGTTCT GGGGCGACGAGGTGGAGGAGATCCGGACCTTCGCCGTGGCCGACCAACGCACCATCGAGGGAGTCGGCCAACTCTGGGCT CCGCCCTGCCGGGAGCTGTTGCTCACCCCGGCCGTGCGGAAGCGGGCCGCTGCCCTGGCCGTCGACCACCCGGAGTTGGC GGAGATCCTCGACAAGCTTGCCGAGGGGATACCGGTCGAGGGGATGGAGTCGCTCGCTCCGGTGCTGATCGGCGCTGACT CGATGGAGCTGCTGCTGGACACCATGCCCGCGGGTACCCACGTGCTGCTCTGCGATCCGGAGCGGATCCGCACCCGGGCG CACGACCTGGTGCGTACCTCGGCGGAGTTCCTCCAGGCCAGCTGGGCCGCGGCTGCGGTCGGCGGCGCGGCCCCGATCGA CCTCGGTGCTGCCGCCTTCCGAACGCTCGCCGACGTCCGCGTGCGGGCCCGCGCGCTGGGCCAGCCGTGGTGGACGGTGT CCCCGTTCGGGCTGGCCGAGCCGGCCACGGCACCGGCGCGTCAGCCGTGGGAGGACGAGCCGGCCGAGATCGATGTCACT CCGGACGACGCGATCGCGGTGACCGTCGCGGCCCAGCCCGCGCCGCTGTATCACGGCGAGACGGCACGGGTGGTCGACGA CCTGAAGCGTTGGGCCGGCGAGGGCTGGTCGGTGGCGCTGGTGTTCGAGGGCCACGGCCCCGCCCAGCGCGCCGTCGAGG TGCTGCACGACGCCGGCCTCGGCGTCCGCCTGGTCGACGAGGTGCCGGCGGCACCGGCCACCGGCGAGATACTGGTCAGC CGCGGGTCGCTGACCGGTGGCTTCGTCGACGCGGCGTCCCGTTTCGTGCTGCTCACCGGGGATGACGTCACCGGCGGCCG AGGCACCTCGACGCGGGACATGCGCAAGCTGCCGAGCCGGCGGCGCAACACCATCGATCCGCTGGAGCTGCGGGCCGGCG ATCACGTGGTGCACGAGCAGCACGGCATCGGCCGGTACGTCGAACTGGTGCAGCGCACCGTCAACGGAGCCAGCCGGGAG TACCTGGTCATCGAGTACGCCCCGAGTAAGCGTGGCCAGCCCGGCGACCGGCTCTTCGTCCCCACCGACCAGCTCGACCA GCTGTCCCGGTATGTCGGCGGCGAGCAGCCGACCCTGCACAAGATGGGTGGCTCGGACTGGCAGAAGTCGAAGGCCCGGG CCCGCAAAGCCGTCCGGGAGATCGCCGCGCAGCTCATCCAGCTCTACGCCGCCCGCAAGGCGTCCAAGGGGCACCCGTTC GGCCCGGACACCCCGTGGCAGCGGGAGCTGGAGGACGCCTTCCCCTGGCAGGAGACGCCGGACCAGCTCGCGGCGATCGA GGAGGTCAAGCGGGACATGGAGCAGACGGTCCCGATGGACCGGCTGATCTGCGGCGACGTCGGTTACGGCAAGACCGAGA TCGCTGTCCGGGCGGCGTTCAAGGCCATCCAGGACGGCCGGCAGGTGGCCGTGCTCGTGCCCACCACCCTGCTGGTGCAG CAGCACTACAACACCTTCGCCGAGCGGATGAGTCAGTTCCCGGCGACGATTCGTCAGCTGTCCCGGTTCCAGACGTCGAA GGAGGCCGAGCAGACTCTGACGATGGCCGCCGACGGCACCGCCGACATCGTTATCGGCACCCACCGGCTGCTCCAGGCGT CCGCCCGGTTCAAGTCGCTCGGGCTGGTCATCGTGGACGAGGAGCAGCGTTTCGGCGTCGAGCACAAGGAGCACCTGAAG TCGGTGCGGGCCTCCGTTGACGTGTTGAGCATGTCGGCCACACCGATCCCCCGGACGCTGGAGATGGCGATCACCGGTAT CCGGGAGATGTCCACCATCGCCACCCCGCCGGAGGAGCGGCACCCGGTGCTCACCGCGGTCGGGGCGTACGACGAGCGGC AGGTGGCCGCCGCCATTCACCGCGAGTTGCTCCGCGACGGTCAGGTCTTCTACCTGCACAACCGGGTGGAGTCGATCGAG CGGGCGGCGCGCAGGCTGCGGGAGCTGGTGCCGGAGGCGCGGGTTGCGGTGGCGCATGGCCAACTGGGCGAGGAGGCCCT GGAACGGGTCATGGTCGGCTTCTGGGAAAAACAGTTCGACGTCCTGGTCTGCACCACGATCGTCGAGTCCGGCATCGACA TCCCGAACGCCAACACCCTGATCGTCGAGCGGGCCGATCTGCTCGGCCTGGCCCAGCTGCACCAGATCCGGGGCCGGGTC GGCCGTGGTCGGGAGCGGGCGTACGCGTACTTCCTCTACCCGTCGGACAAGCCGCTCACCGAGCACGCCCACGAACGGTT GGCCACCATCGCCCAGCACACCGAGTTGGGGGCCGGCATGTACGTGGCGATGAAGGACCTGGAGATCCGGGGCGCCGGCA ACCTGCTCGGTGGCGAGCAGTCCGGCCACATCGAGGGCGTCGGTTTCGACCTGTACGTGCGGATGGTCGGCGAGGCGGTG CAGGCGTTCAAGGGAGAGCGTCCGGAGGAGGAGACGGAGGTCAAGGTCGATCTGCCGGTGGACGCGCACCTGCCGCACGA CTACGTCGGGGTGGAACGGCTACGCCTGGAGATGTACCGCAAGCTCGCTGAGGCCCGCGACGAGGAGCGGCTGCGCGCGG TGGTCGCCGAGCTGACCGACCGCTACGGCGAGCCGCCGGCCCCGGTGCAGAACCTGGTGGCGGTGGCCCGGTTCCGGCTG CTCGCCCGGCGGTACGGGCTCACCGACGTCAGCATGCAGGGCCGGCATCTGCGCTTCGGCCCGTTGCCGCTGCCCGACTC GAAGCAACTGCGGCTCAAGCGGTACCACCCGGACGCGGTCTACAAGCAGGCGCTGGAACAGGTCAGCGTGCCGCGGCCCA GTACTCGGCGGATCGGTGGCGAGCTGCTGCGCGACCAGGCGCTGCTGGAATGGTGCGGACAGCTGCTCGCCGACGTACTC GGCGAGCCTCGGGAACTGGCCGGTGCCGCTGGTTCGGCGGTGCGCGGCGGACGGTGA
Upstream 100 bases:
>100_bases GGACGTCGATCCCCTCCCGGGGAGATAGGGTCGGCGTGATAACCCCTCGTCCGGCCGGACGAGGGGTGCTCGTCGTGCCG TCGCCGTGGAAGTGGTCACC
Downstream 100 bases:
>100_bases GGCGGGCGGCGGCTCCCGCCCATCCGCGGCCGAACGGCGAGCCGTGGGGGGCGTCGGGTCCTGCGCCGCGGGCGTGAGAG AGTTGCCGTCATGCGTGCTC
Product: transcription-repair coupling factor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1218_residues MLTGLFVAALTDPALARARDLARSGAAQVDGLDLTAPPALRPFAVAAIAADEPVGGAGRPVLAVTATTREADDLAAALGC LIPADQVAVFPSWETLPHERLSPRSDTVGRRLAVLRRLAHPDAADSQGRHGPLRVIVAPVRSLLQPQLKGLGELEPVRLA AGDEADLEDLARRLTDLAYARVDLVTKRGEFAVRGGILDVFPPTDEHPARVEFWGDEVEEIRTFAVADQRTIEGVGQLWA PPCRELLLTPAVRKRAAALAVDHPELAEILDKLAEGIPVEGMESLAPVLIGADSMELLLDTMPAGTHVLLCDPERIRTRA HDLVRTSAEFLQASWAAAAVGGAAPIDLGAAAFRTLADVRVRARALGQPWWTVSPFGLAEPATAPARQPWEDEPAEIDVT PDDAIAVTVAAQPAPLYHGETARVVDDLKRWAGEGWSVALVFEGHGPAQRAVEVLHDAGLGVRLVDEVPAAPATGEILVS RGSLTGGFVDAASRFVLLTGDDVTGGRGTSTRDMRKLPSRRRNTIDPLELRAGDHVVHEQHGIGRYVELVQRTVNGASRE YLVIEYAPSKRGQPGDRLFVPTDQLDQLSRYVGGEQPTLHKMGGSDWQKSKARARKAVREIAAQLIQLYAARKASKGHPF GPDTPWQRELEDAFPWQETPDQLAAIEEVKRDMEQTVPMDRLICGDVGYGKTEIAVRAAFKAIQDGRQVAVLVPTTLLVQ QHYNTFAERMSQFPATIRQLSRFQTSKEAEQTLTMAADGTADIVIGTHRLLQASARFKSLGLVIVDEEQRFGVEHKEHLK SVRASVDVLSMSATPIPRTLEMAITGIREMSTIATPPEERHPVLTAVGAYDERQVAAAIHRELLRDGQVFYLHNRVESIE RAARRLRELVPEARVAVAHGQLGEEALERVMVGFWEKQFDVLVCTTIVESGIDIPNANTLIVERADLLGLAQLHQIRGRV GRGRERAYAYFLYPSDKPLTEHAHERLATIAQHTELGAGMYVAMKDLEIRGAGNLLGGEQSGHIEGVGFDLYVRMVGEAV QAFKGERPEEETEVKVDLPVDAHLPHDYVGVERLRLEMYRKLAEARDEERLRAVVAELTDRYGEPPAPVQNLVAVARFRL LARRYGLTDVSMQGRHLRFGPLPLPDSKQLRLKRYHPDAVYKQALEQVSVPRPSTRRIGGELLRDQALLEWCGQLLADVL GEPRELAGAAGSAVRGGR
Sequences:
NA
Specific function: NA
COG id: COG1197
COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA