| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15899894
Identifier: 15899894
GI number: 15899894
Start: 2935330
End: 2936877
Strand: Direct
Name: 15899894
Synonym: SSO3189
Alternate gene names: NA
Gene position: 2935330-2936877 (Clockwise)
Preceding gene: 15899886
Following gene: 15899901
Centisome position: 98.1
GC content: 37.4
Gene sequence:
>1548_bases GTGAGTAACAAAAATAGAATATTCGTAAGGGAGACTTCTGGTTTAATAAAGAACGTATCATTATGGGATGCAGTTGCACT CAATATAGGCAATATGTCAGCTGGAGTAGCATTATTTGAATCAATATCACCATATGTACAACAAGGAGGAGTATTGTGGC TGGCTTCATTAATAGGCTTCATCTTCGCTATACCACAACTGTTAATTTATGTATTTTTAACGGAAAAAATTCCGAGAACT GGTGGAGATTACGTTTGGATTTCGAGAAGCCTAAATGGCGGTTTAGGATCCATAATGGCTTTAGCATTGATGATAGAGTC TACAGCTTACTTCGCACTTGTAGCGTTTTTTACGTCTTCTGCTATAAACACTGCCCTAACAGTAATAGGCGAATATCAAC ACTCTCCCATCCTCTTAAACATAGCAAACAACGTGATAGTTGATCCATATGTAGTAACACCCACCTTACAACAAAGCTTA ATAATTTATGGAATTTCAGCGTTGGTTTTCGTAGTAATAATTCTACTTAACATATTTAGGGCTAAGTGGGGGTATAGAGT AGTGTCAGTTTTGGGAATATTTTCGATAGCGACGTTAATCTTAGCAATGATAGTTCTAGCACTAAATTCAAGTGACTTTT ACTCAAAACTCTCGACATTAATAACCGCTAATAACCTTAATATTACTATTCCATCGTCAAGAGGATCGTTTTTGCCTTCT TCGCTATCTTGGTCTGCTACATTATTCCTCCTACCATTCTTCGCATTATATACATATCCTTGGATGCAAGCTGGACCTGC AGTTGCTGCTGAGTTTAGGGGAAGGAAGACCGTAAAGTGGAACTTACCGATAGCGCTAATAATCACTGGAATACTGGTAA CATTAGCGTTTCTTGAGATGGATTTAATTGGAGGTTATAATTTCAATTTAGAGGCTTATCCAACCTTCTTATACAACTTC TGGACTGCAGCAATAGCTGTAGCCTCAAATCCCATATTGCAATGGATAATCGCATTAGGGCTAATAGTATGGAACATATA CATACTTGCTTACGGTGTTATAGTATTTGCCAGATACGTTTTTGCATTATCCTTCGATAGAGTTTTACCGACTAAGTTCA GTGAGGTTAATAAACATGGCTCACCAGTATACGCTCACGTATTCGATCTCTCACTAACTTTACTATTACTTTTAGTTCCA GCATTCTCCATAGGTGCAGCAATATCCCTCTATGGTGCGACGATACTTGGAAGCTTATATTTTCTCGTGGTAAGTATAGC TGGTATTGCATTTGGAACTAAGGATAGAAATTATGTATTATCTATAGCTGGTATAATTTCAGCTGCTTATTTCGCATATC TGACCTATGTGGCCGCAACAAATCCAGATTTCGGATTCATGACTTCTAGCGGACCTAACTTAATTACGACTATATTTGTG GTAGGGACATTCATTGCTGGTGCATTGGCATACATCATATCAAAGATTGTTCATAAAAGGAAAGGTATTGATATAGATTT AGCATTTAAGGAAATACCGCCTGAATAA
Upstream 100 bases:
>100_bases CTAATGTCATTTACTTGTCTAAGTAAATTATGAACGATTATCTAATCATACTTTTGCAATGGATAAGTAAATTTAAATAG GGGAATTTAGAAGATAGCGT
Downstream 100 bases:
>100_bases TTTTTTGATAAAAATTACTTATATTTTTTATTATTGAAGTCATAAGAGGGAAATTTAAGGTAAAAACATAATTGACAATT GATACTCATTATTGCAGTTA
Product: amino acid transporter, putative
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Transporter-Like Protein; Amino Acid Permease-Associated Protein
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MSNKNRIFVRETSGLIKNVSLWDAVALNIGNMSAGVALFESISPYVQQGGVLWLASLIGFIFAIPQLLIYVFLTEKIPRT GGDYVWISRSLNGGLGSIMALALMIESTAYFALVAFFTSSAINTALTVIGEYQHSPILLNIANNVIVDPYVVTPTLQQSL IIYGISALVFVVIILLNIFRAKWGYRVVSVLGIFSIATLILAMIVLALNSSDFYSKLSTLITANNLNITIPSSRGSFLPS SLSWSATLFLLPFFALYTYPWMQAGPAVAAEFRGRKTVKWNLPIALIITGILVTLAFLEMDLIGGYNFNLEAYPTFLYNF WTAAIAVASNPILQWIIALGLIVWNIYILAYGVIVFARYVFALSFDRVLPTKFSEVNKHGSPVYAHVFDLSLTLLLLLVP AFSIGAAISLYGATILGSLYFLVVSIAGIAFGTKDRNYVLSIAGIISAAYFAYLTYVAATNPDFGFMTSSGPNLITTIFV VGTFIAGALAYIISKIVHKRKGIDIDLAFKEIPPE
Sequences:
>Translated_515_residues MSNKNRIFVRETSGLIKNVSLWDAVALNIGNMSAGVALFESISPYVQQGGVLWLASLIGFIFAIPQLLIYVFLTEKIPRT GGDYVWISRSLNGGLGSIMALALMIESTAYFALVAFFTSSAINTALTVIGEYQHSPILLNIANNVIVDPYVVTPTLQQSL IIYGISALVFVVIILLNIFRAKWGYRVVSVLGIFSIATLILAMIVLALNSSDFYSKLSTLITANNLNITIPSSRGSFLPS SLSWSATLFLLPFFALYTYPWMQAGPAVAAEFRGRKTVKWNLPIALIITGILVTLAFLEMDLIGGYNFNLEAYPTFLYNF WTAAIAVASNPILQWIIALGLIVWNIYILAYGVIVFARYVFALSFDRVLPTKFSEVNKHGSPVYAHVFDLSLTLLLLLVP AFSIGAAISLYGATILGSLYFLVVSIAGIAFGTKDRNYVLSIAGIISAAYFAYLTYVAATNPDFGFMTSSGPNLITTIFV VGTFIAGALAYIISKIVHKRKGIDIDLAFKEIPPE >Mature_514_residues SNKNRIFVRETSGLIKNVSLWDAVALNIGNMSAGVALFESISPYVQQGGVLWLASLIGFIFAIPQLLIYVFLTEKIPRTG GDYVWISRSLNGGLGSIMALALMIESTAYFALVAFFTSSAINTALTVIGEYQHSPILLNIANNVIVDPYVVTPTLQQSLI IYGISALVFVVIILLNIFRAKWGYRVVSVLGIFSIATLILAMIVLALNSSDFYSKLSTLITANNLNITIPSSRGSFLPSS LSWSATLFLLPFFALYTYPWMQAGPAVAAEFRGRKTVKWNLPIALIITGILVTLAFLEMDLIGGYNFNLEAYPTFLYNFW TAAIAVASNPILQWIIALGLIVWNIYILAYGVIVFARYVFALSFDRVLPTKFSEVNKHGSPVYAHVFDLSLTLLLLLVPA FSIGAAISLYGATILGSLYFLVVSIAGIAFGTKDRNYVLSIAGIISAAYFAYLTYVAATNPDFGFMTSSGPNLITTIFVV GTFIAGALAYIISKIVHKRKGIDIDLAFKEIPPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56186; Mature: 56055
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKNRIFVRETSGLIKNVSLWDAVALNIGNMSAGVALFESISPYVQQGGVLWLASLIGF CCCCCEEEEEECCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH IFAIPQLLIYVFLTEKIPRTGGDYVWISRSLNGGLGSIMALALMIESTAYFALVAFFTSS HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AINTALTVIGEYQHSPILLNIANNVIVDPYVVTPTLQQSLIIYGISALVFVVIILLNIFR HHHHHHHHHCCCCCCCEEEEECCCEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AKWGYRVVSVLGIFSIATLILAMIVLALNSSDFYSKLSTLITANNLNITIPSSRGSFLPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCEEEEECCCCCCCCC SLSWSATLFLLPFFALYTYPWMQAGPAVAAEFRGRKTVKWNLPIALIITGILVTLAFLEM CCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH DLIGGYNFNLEAYPTFLYNFWTAAIAVASNPILQWIIALGLIVWNIYILAYGVIVFARYV HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALSFDRVLPTKFSEVNKHGSPVYAHVFDLSLTLLLLLVPAFSIGAAISLYGATILGSLY HHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVVSIAGIAFGTKDRNYVLSIAGIISAAYFAYLTYVAATNPDFGFMTSSGPNLITTIFV HHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHH VGTFIAGALAYIISKIVHKRKGIDIDLAFKEIPPE HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure SNKNRIFVRETSGLIKNVSLWDAVALNIGNMSAGVALFESISPYVQQGGVLWLASLIGF CCCCEEEEEECCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH IFAIPQLLIYVFLTEKIPRTGGDYVWISRSLNGGLGSIMALALMIESTAYFALVAFFTSS HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AINTALTVIGEYQHSPILLNIANNVIVDPYVVTPTLQQSLIIYGISALVFVVIILLNIFR HHHHHHHHHCCCCCCCEEEEECCCEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AKWGYRVVSVLGIFSIATLILAMIVLALNSSDFYSKLSTLITANNLNITIPSSRGSFLPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCEEEEECCCCCCCCC SLSWSATLFLLPFFALYTYPWMQAGPAVAAEFRGRKTVKWNLPIALIITGILVTLAFLEM CCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH DLIGGYNFNLEAYPTFLYNFWTAAIAVASNPILQWIIALGLIVWNIYILAYGVIVFARYV HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALSFDRVLPTKFSEVNKHGSPVYAHVFDLSLTLLLLLVPAFSIGAAISLYGATILGSLY HHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVVSIAGIAFGTKDRNYVLSIAGIISAAYFAYLTYVAATNPDFGFMTSSGPNLITTIFV HHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHH VGTFIAGALAYIISKIVHKRKGIDIDLAFKEIPPE HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA