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The map label for this gene is 15899860

Identifier: 15899860

GI number: 15899860

Start: 2906854

End: 2907432

Strand: Reverse

Name: 15899860

Synonym: SSO3154

Alternate gene names: NA

Gene position: 2907432-2906854 (Counterclockwise)

Preceding gene: 15899862

Following gene: 15899859

Centisome position: 97.17

GC content: 38.17

Gene sequence:

>579_bases
ATGCTAAGACCTAAAGAAGCATGCCAAAGACTAGGAATATCCTATGCAACACTTAGAGAATACGTTAAGAAAGGATACAT
AAAACCAGTTATACTACAGAGCGGAAAATGGAGGTTCAGAGAAGAAGACATAGAGAGGCTAATGGGAATTATTAGAAAAA
GAAAAGTGATATTATACGCTAGAGTATCATCTTCCACACAAAAAGACGATCTAGTAAACCAAGTTAAGTACCTAGAGGAA
CAAGTCAAAGAATACGACCTCGTAATTACTGACATAGGTTCAGGGTTAAACATGAAGAGAAAGGGGTTCTTGAAGTTGTT
GAGAATGATACTGAACAACGAAGTATCACGCGTAGTTGTTGCTTACCCAGATAGGCTAGTCAGATTCGGTTTCGAAATCC
TGGAGGAGACTTGTAAAGCACATGGTTGTGAAATAGTAGTACTAAACCAAGAGGACAAAGAGGAAGAACTGGTTGAAGAC
TTAGTCTCAATACTAGTCTCATTCAGTGGGAAACTCTATGGCATGAGGAGTCATAAATACGAAAAGGTGAAGAAATGTGC
TGAAGAACTTAAGAATTAG

Upstream 100 bases:

>100_bases
TTTAGAAACCTTTTGCCCCTTAATCTCCAATACTCCGCCGTTGCCAACAGTTTCCGATAAACCGTAAAGTTTATATTATT
TTGCAACAAACTCTTATACA

Downstream 100 bases:

>100_bases
AAAATTTGAACCGGAAGAGGAATACGTGTACTTCACGTACTCCATCAAGAACGACAAGAGGGAGAAGAGCAAAGAGTTAA
TTAAAGAATACGGAACACTA

Product: transposon ISC1778 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYARVSSSTQKDDLVNQVKYLEE
QVKEYDLVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVRFGFEILEETCKAHGCEIVVLNQEDKEEELVED
LVSILVSFSGKLYGMRSHKYEKVKKCAEELKN

Sequences:

>Translated_192_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYARVSSSTQKDDLVNQVKYLEE
QVKEYDLVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVRFGFEILEETCKAHGCEIVVLNQEDKEEELVED
LVSILVSFSGKLYGMRSHKYEKVKKCAEELKN
>Mature_192_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYARVSSSTQKDDLVNQVKYLEE
QVKEYDLVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVRFGFEILEETCKAHGCEIVVLNQEDKEEELVED
LVSILVSFSGKLYGMRSHKYEKVKKCAEELKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22424; Mature: 22424

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHEEEE
RVSSSTQKDDLVNQVKYLEEQVKEYDLVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCHHHEEEE
AYPDRLVRFGFEILEETCKAHGCEIVVLNQEDKEEELVEDLVSILVSFSGKLYGMRSHKY
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
EKVKKCAEELKN
HHHHHHHHHHCC
>Mature Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHEEEE
RVSSSTQKDDLVNQVKYLEEQVKEYDLVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCHHHEEEE
AYPDRLVRFGFEILEETCKAHGCEIVVLNQEDKEEELVEDLVSILVSFSGKLYGMRSHKY
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
EKVKKCAEELKN
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]