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The map label for this gene is ycbL [C]

Identifier: 15899838

GI number: 15899838

Start: 2883400

End: 2884029

Strand: Direct

Name: ycbL [C]

Synonym: SSO3132

Alternate gene names: 15899838

Gene position: 2883400-2884029 (Clockwise)

Preceding gene: 15899835

Following gene: 15899840

Centisome position: 96.36

GC content: 37.3

Gene sequence:

>630_bases
ATGATTGTTAAAAATTTCATTACTGGACCACTTGCAACAAACTCTTACCTAGTAATTGCGGGAAAGGAAGGGGTAATAAT
AGACGCTGGAGGAGATATGAGCGAACTAATACAAACAGTGAGAAAAGAGAAAATCAACATAAGGTATATAATAGCAACGC
ATGGTCACTTTGACCACATCATGGGAGTGAACCAAATAAAGAGGGACTTCCCTTCATCAACTTTCCTAATTAACGAAAAG
GACTTAGGATTACTAAAGAGGGCTAGTAGTATGGCACAGTCTTTCCTTAACCTATTAATTTCAGATGTGACTAAACCTGA
CGGTTTTGTAAAGGAAGGTGATGAAATAGAACTAGGAGGGGAAAAGTTGAAAATTATTGAAACTCCAGGTCATACCATGG
GAAGTATCTGCATTATAGCAAATGGATACATATTCACCGGGGATACGTTATTTTACGGAACTGTTGGTAGGACTGACTTA
GGTGGATCTGAAAAATTACTGAGAGAAAGTTTAGAAAAACTGAAGAAATTACCAGATGAGATAATAGTTTACCCAGGGCA
CGGTCCATTTACAGTATTAGGATATGAGAAAGTAAAGAATCCTTTCCTAACCATGGACATATTGCCATAA

Upstream 100 bases:

>100_bases
CTTTCTAATGAAATTGAGCTGATCTTCGTTTATCATTAAATTGTATTATCAACTCCTCATATAATAAGTTTTTATCCTAA
CGTGTGTAAGATTATATATA

Downstream 100 bases:

>100_bases
GTTAACCCAGCTTACTTTCCAACTTATTTTTCAAATCATCTAAAAACACACTTAACTTCCTAGCCACCTTTTTCTCCTGT
ATTGATTGAATCTTATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MIVKNFITGPLATNSYLVIAGKEGVIIDAGGDMSELIQTVRKEKINIRYIIATHGHFDHIMGVNQIKRDFPSSTFLINEK
DLGLLKRASSMAQSFLNLLISDVTKPDGFVKEGDEIELGGEKLKIIETPGHTMGSICIIANGYIFTGDTLFYGTVGRTDL
GGSEKLLRESLEKLKKLPDEIIVYPGHGPFTVLGYEKVKNPFLTMDILP

Sequences:

>Translated_209_residues
MIVKNFITGPLATNSYLVIAGKEGVIIDAGGDMSELIQTVRKEKINIRYIIATHGHFDHIMGVNQIKRDFPSSTFLINEK
DLGLLKRASSMAQSFLNLLISDVTKPDGFVKEGDEIELGGEKLKIIETPGHTMGSICIIANGYIFTGDTLFYGTVGRTDL
GGSEKLLRESLEKLKKLPDEIIVYPGHGPFTVLGYEKVKNPFLTMDILP
>Mature_209_residues
MIVKNFITGPLATNSYLVIAGKEGVIIDAGGDMSELIQTVRKEKINIRYIIATHGHFDHIMGVNQIKRDFPSSTFLINEK
DLGLLKRASSMAQSFLNLLISDVTKPDGFVKEGDEIELGGEKLKIIETPGHTMGSICIIANGYIFTGDTLFYGTVGRTDL
GGSEKLLRESLEKLKKLPDEIIVYPGHGPFTVLGYEKVKNPFLTMDILP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=195, Percent_Identity=29.2307692307692, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1787158, Length=184, Percent_Identity=32.0652173913043, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1786406, Length=78, Percent_Identity=42.3076923076923, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538952, Length=214, Percent_Identity=33.1775700934579, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17536925, Length=155, Percent_Identity=34.8387096774194, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24667703, Length=183, Percent_Identity=30.6010928961749, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21356335, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24667711, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23000; Mature: 23000

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKNFITGPLATNSYLVIAGKEGVIIDAGGDMSELIQTVRKEKINIRYIIATHGHFDHI
CEECCCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCHHHH
MGVNQIKRDFPSSTFLINEKDLGLLKRASSMAQSFLNLLISDVTKPDGFVKEGDEIELGG
CCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
EKLKIIETPGHTMGSICIIANGYIFTGDTLFYGTVGRTDLGGSEKLLRESLEKLKKLPDE
CEEEEEECCCCCCCEEEEEECCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
IIVYPGHGPFTVLGYEKVKNPFLTMDILP
EEEECCCCCEEEEEHHHHCCCEEEEEECC
>Mature Secondary Structure
MIVKNFITGPLATNSYLVIAGKEGVIIDAGGDMSELIQTVRKEKINIRYIIATHGHFDHI
CEECCCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCHHHH
MGVNQIKRDFPSSTFLINEKDLGLLKRASSMAQSFLNLLISDVTKPDGFVKEGDEIELGG
CCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
EKLKIIETPGHTMGSICIIANGYIFTGDTLFYGTVGRTDLGGSEKLLRESLEKLKKLPDE
CEEEEEECCCCCCCEEEEEECCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
IIVYPGHGPFTVLGYEKVKNPFLTMDILP
EEEECCCCCEEEEEHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]