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The map label for this gene is yxlF [H]

Identifier: 15899804

GI number: 15899804

Start: 2846633

End: 2847346

Strand: Reverse

Name: yxlF [H]

Synonym: SSO3093

Alternate gene names: 15899804

Gene position: 2847346-2846633 (Counterclockwise)

Preceding gene: 15899807

Following gene: 15899803

Centisome position: 95.16

GC content: 34.31

Gene sequence:

>714_bases
GTGATAAGGGCAATAAACGTAAGTAAAATTTTTCACGGAAGTTCTGCAGTAGTTGAAGTTAATCTAGATATTTATGAGAA
CGAGAAGGTAGGAGTTATAGGTGTTCATAACTCAGGGAAGACTGTACTACTTCAGATGCTAGCTGGAGATGTGAAACCAA
CTAAAGGTAAAGTGTATTTAGAAGATAAGAGGAAGATCGCTTATATACCTCAGGTACCCAAATTTATACCCACTATCAGT
GTTAAAGACGTAATGACTTATGTTAATAAGGAGTATCATTATTTAGATTTTGTTGGATTAGATGGAAATAAGAAGGTTAA
GGATCTATCCTTAGATGAGAAAAAGAGGTTGTCCTTAGCTCTTTCATTACCTTTTTCCCCTAACCACCTCATAGTCGATG
ACATGTCCCAAATTTCTTCTCTAACTAAAGATTTGATAAGGAGATTTAAAGGAGGTGTGATAATTGCTCACCATAACCTT
AAGGATATATGGGATTTAATAGATAGAGTTATAATTATGTCTAAGGGTAGGGTCGTTTTCGATGGTCCCAAGAGTGGATT
GTTGTACAAGGTTATAAGATTTAAGAATAGTGAGATATGGGAAAGGGAAAACGAGAATAGTATTGAAATTGATTTAGATA
AATGTGGAGTTAAGTATGAGGTTATTAGAGTGACACCAGATGAGGTTTTCCTATATTTTTATGCAGGAATTTAA

Upstream 100 bases:

>100_bases
CGGCATTATCTTCACATTCAAGCATTCAAGGAAAATCCTATAACTGCTGTTATCAAATCACAAGAAAATATATTAGGTTT
TAAAACGAGTAAACTTTAAC

Downstream 100 bases:

>100_bases
AAGATCAATTGTATTCGTCTTCTTAATTCTTATAGCTCTGAGTCTGTCACTAATAGCTGCGCAAATTCTTTCCGAATCGA
TAAGCGTTATAGGAATCGTT

Product: ABC transporter, ATP binding protein, putative

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIRAINVSKIFHGSSAVVEVNLDIYENEKVGVIGVHNSGKTVLLQMLAGDVKPTKGKVYLEDKRKIAYIPQVPKFIPTIS
VKDVMTYVNKEYHYLDFVGLDGNKKVKDLSLDEKKRLSLALSLPFSPNHLIVDDMSQISSLTKDLIRRFKGGVIIAHHNL
KDIWDLIDRVIIMSKGRVVFDGPKSGLLYKVIRFKNSEIWERENENSIEIDLDKCGVKYEVIRVTPDEVFLYFYAGI

Sequences:

>Translated_237_residues
MIRAINVSKIFHGSSAVVEVNLDIYENEKVGVIGVHNSGKTVLLQMLAGDVKPTKGKVYLEDKRKIAYIPQVPKFIPTIS
VKDVMTYVNKEYHYLDFVGLDGNKKVKDLSLDEKKRLSLALSLPFSPNHLIVDDMSQISSLTKDLIRRFKGGVIIAHHNL
KDIWDLIDRVIIMSKGRVVFDGPKSGLLYKVIRFKNSEIWERENENSIEIDLDKCGVKYEVIRVTPDEVFLYFYAGI
>Mature_237_residues
MIRAINVSKIFHGSSAVVEVNLDIYENEKVGVIGVHNSGKTVLLQMLAGDVKPTKGKVYLEDKRKIAYIPQVPKFIPTIS
VKDVMTYVNKEYHYLDFVGLDGNKKVKDLSLDEKKRLSLALSLPFSPNHLIVDDMSQISSLTKDLIRRFKGGVIIAHHNL
KDIWDLIDRVIIMSKGRVVFDGPKSGLLYKVIRFKNSEIWERENENSIEIDLDKCGVKYEVIRVTPDEVFLYFYAGI

Specific function: Part Of The Binding-Protein-Dependent Transport System For Putrescine. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Drosophila melanogaster, GI221500365, Length=210, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007184, Length=210, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26998; Mature: 26998

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAINVSKIFHGSSAVVEVNLDIYENEKVGVIGVHNSGKTVLLQMLAGDVKPTKGKVYL
CEEEEEHHHEECCCCEEEEEEEEEEECCCEEEEEEECCCHHHHEEEHHCCCCCCCCEEEE
EDKRKIAYIPQVPKFIPTISVKDVMTYVNKEYHYLDFVGLDGNKKVKDLSLDEKKRLSLA
ECCCEEEECCCCCHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCEEEEE
LSLPFSPNHLIVDDMSQISSLTKDLIRRFKGGVIIAHHNLKDIWDLIDRVIIMSKGRVVF
EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEEECCEEEE
DGPKSGLLYKVIRFKNSEIWERENENSIEIDLDKCGVKYEVIRVTPDEVFLYFYAGI
ECCCCCCEEEEEEECCCHHCCCCCCCEEEEEHHHCCCEEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MIRAINVSKIFHGSSAVVEVNLDIYENEKVGVIGVHNSGKTVLLQMLAGDVKPTKGKVYL
CEEEEEHHHEECCCCEEEEEEEEEEECCCEEEEEEECCCHHHHEEEHHCCCCCCCCEEEE
EDKRKIAYIPQVPKFIPTISVKDVMTYVNKEYHYLDFVGLDGNKKVKDLSLDEKKRLSLA
ECCCEEEECCCCCHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCEEEEE
LSLPFSPNHLIVDDMSQISSLTKDLIRRFKGGVIIAHHNLKDIWDLIDRVIIMSKGRVVF
EECCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEEECCEEEE
DGPKSGLLYKVIRFKNSEIWERENENSIEIDLDKCGVKYEVIRVTPDEVFLYFYAGI
ECCCCCCEEEEEEECCCHHCCCCCCCEEEEEHHHCCCEEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]