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The map label for this gene is ttuB [H]

Identifier: 15899788

GI number: 15899788

Start: 2834843

End: 2836114

Strand: Direct

Name: ttuB [H]

Synonym: SSO3079

Alternate gene names: 15899788

Gene position: 2834843-2836114 (Clockwise)

Preceding gene: 15899787

Following gene: 15899789

Centisome position: 94.74

GC content: 37.03

Gene sequence:

>1272_bases
ATGAGGTATCGTTCTCTAGTTGAAACATCAAGAAGTAAAAGATACGTGAGACTACTCCCTATGCTCTTTTTCTTATATAT
AGTAAACTTTCTCGATAGAGTAAATATTTCCTATGCAATAGATGCCGGAATGTTCCAATATCTAGGAGTTTCTGCTAAGG
AAGTTGGTATAATTGCTTCCCTAGCTTCATCATTATTCTTTGTAGGTTATTTTATTCCCCAAATCTTCTCAAATCTCGGT
ATTAACAGATATGGTGTTAGGAAAATATTTCTTATAGCATTTCTAGCGTGGGGCATAATAACTATTGCAACTGGTTTTGT
AACCTCAGTTTCGCAAGTATACGTACTAAGATTTCTACTTGGAATAGCTGAAGGACCATTCTTTGCGGGTGTAATGTTCT
ATCTGAGTTTGTGGTTCTTGAAACCAGAAAGAGCTACTGCCAATAGTTTCTTTACTGCTGCAATTCCAATATCTGGAATA
TTTGGTAGTCTAATTGCTGGAGCAATATTTGCAACTTATGGTAACTATCCAGGATGGCGATATTTGTTCTGGTATGAAGG
AATGTTGGCAATATTTGGTGGGTTACTTGCGTACTTTATTTTAACAGACTTCCCAAGTGATGCCAAGTGGTTAAGCAATG
ACGAAAGGAGTGCATTAGAGCAAGCATTTAAGGAGGAGGAGGTGGAGAAGGTTAAGGTTAGTTGGACTAAAGCATTAGCT
GACTTAAATGTAATATTACTTGCCATTGTTTACTTTTTAGGAGTTACAAGTCTTTACGGCTATTCGATCTGGCTACCATC
AATTATTAGCTTTATTGGTAAAGTTAATGCTACAATTGCTAGTTTTCTGTCAATAGTACCATATGTTATTGCCTCGATAT
CATTAATTCTCATAGCTCGCTATGCTGATAGAAGGCAAAATCATAGATTTGTAACCTTTGCAGTATTTCTAGTTGCTGGA
ATTGGTTTAGCATTAAGTGCTGCAACTCAGAGTATATTTATTTTATCATTCATGCTTTTCGCAATAGCTGCTATAGGGAT
TTACAGCTTCATTGCAACGTTTTGGGCGGTACCTCAAGGTTATTTATCTGGCGATGCAGCTGCAGCTGCTATAGGTTTGA
TAAACGCTATTGGAAATCTTGGAGGAATTGCCGGTCCTATAGTAGTGGGATTTCTAAAATCGTACACTGGATCATTTGTA
GATGGAATTTACGTCATGGCGCTATTCTCAATTTTAGCTGGTGTAATAACATTGCTTATCAGGAGGAGTTGA

Upstream 100 bases:

>100_bases
AACCCTTATCTCAATTTATTTTATATTAGAAAATGAAAACTTTTAATGGACTATTTTGATCCGTTAAAAACTTATTAAGT
ATTATTACCATAATTAGTTC

Downstream 100 bases:

>100_bases
GCTATTCCATACTTTTTGCTTTTTCTTTGCCAAGTTCATCCTTTTGTTTATAAATTCTACTATTAAGAAATAAATAGAAA
CAAAAAGACATTTAACTACA

Product: membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRYRSLVETSRSKRYVRLLPMLFFLYIVNFLDRVNISYAIDAGMFQYLGVSAKEVGIIASLASSLFFVGYFIPQIFSNLG
INRYGVRKIFLIAFLAWGIITIATGFVTSVSQVYVLRFLLGIAEGPFFAGVMFYLSLWFLKPERATANSFFTAAIPISGI
FGSLIAGAIFATYGNYPGWRYLFWYEGMLAIFGGLLAYFILTDFPSDAKWLSNDERSALEQAFKEEEVEKVKVSWTKALA
DLNVILLAIVYFLGVTSLYGYSIWLPSIISFIGKVNATIASFLSIVPYVIASISLILIARYADRRQNHRFVTFAVFLVAG
IGLALSAATQSIFILSFMLFAIAAIGIYSFIATFWAVPQGYLSGDAAAAAIGLINAIGNLGGIAGPIVVGFLKSYTGSFV
DGIYVMALFSILAGVITLLIRRS

Sequences:

>Translated_423_residues
MRYRSLVETSRSKRYVRLLPMLFFLYIVNFLDRVNISYAIDAGMFQYLGVSAKEVGIIASLASSLFFVGYFIPQIFSNLG
INRYGVRKIFLIAFLAWGIITIATGFVTSVSQVYVLRFLLGIAEGPFFAGVMFYLSLWFLKPERATANSFFTAAIPISGI
FGSLIAGAIFATYGNYPGWRYLFWYEGMLAIFGGLLAYFILTDFPSDAKWLSNDERSALEQAFKEEEVEKVKVSWTKALA
DLNVILLAIVYFLGVTSLYGYSIWLPSIISFIGKVNATIASFLSIVPYVIASISLILIARYADRRQNHRFVTFAVFLVAG
IGLALSAATQSIFILSFMLFAIAAIGIYSFIATFWAVPQGYLSGDAAAAAIGLINAIGNLGGIAGPIVVGFLKSYTGSFV
DGIYVMALFSILAGVITLLIRRS
>Mature_423_residues
MRYRSLVETSRSKRYVRLLPMLFFLYIVNFLDRVNISYAIDAGMFQYLGVSAKEVGIIASLASSLFFVGYFIPQIFSNLG
INRYGVRKIFLIAFLAWGIITIATGFVTSVSQVYVLRFLLGIAEGPFFAGVMFYLSLWFLKPERATANSFFTAAIPISGI
FGSLIAGAIFATYGNYPGWRYLFWYEGMLAIFGGLLAYFILTDFPSDAKWLSNDERSALEQAFKEEEVEKVKVSWTKALA
DLNVILLAIVYFLGVTSLYGYSIWLPSIISFIGKVNATIASFLSIVPYVIASISLILIARYADRRQNHRFVTFAVFLVAG
IGLALSAATQSIFILSFMLFAIAAIGIYSFIATFWAVPQGYLSGDAAAAAIGLINAIGNLGGIAGPIVVGFLKSYTGSFV
DGIYVMALFSILAGVITLLIRRS

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI154350196, Length=400, Percent_Identity=26, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI6912666, Length=333, Percent_Identity=24.024024024024, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87082071, Length=429, Percent_Identity=31.002331002331, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1789152, Length=434, Percent_Identity=24.8847926267281, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI87082320, Length=398, Percent_Identity=24.6231155778894, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI2367379, Length=427, Percent_Identity=22.248243559719, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789515, Length=435, Percent_Identity=24.367816091954, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115533556, Length=411, Percent_Identity=22.8710462287105, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533554, Length=411, Percent_Identity=22.8710462287105, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321698, Length=354, Percent_Identity=25.4237288135593, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322025, Length=206, Percent_Identity=27.6699029126214, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319876, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322612, Length=267, Percent_Identity=25.4681647940075, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24655271, Length=417, Percent_Identity=23.9808153477218, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI20130135, Length=417, Percent_Identity=23.9808153477218, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24658696, Length=401, Percent_Identity=23.9401496259352, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI28573299, Length=395, Percent_Identity=23.7974683544304, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46520; Mature: 46520

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]