| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is dppC [H]
Identifier: 15899763
GI number: 15899763
Start: 2813690
End: 2814661
Strand: Direct
Name: dppC [H]
Synonym: SSO3059
Alternate gene names: 15899763
Gene position: 2813690-2814661 (Clockwise)
Preceding gene: 15899762
Following gene: 15899766
Centisome position: 94.03
GC content: 34.05
Gene sequence:
>972_bases GTGAAAGTGAGTAAATATTACAATAGAATTAGAAAAGCATTATTTAATAATAAATTTATATTAGCTGGAATTGTAATAAT CTTAGTAGACTTTGCGATAGGGATAGTGGGAGCTTTTTGGACACCGTATCCAGTTTCAGAAACCTTCGGAATTTCTCTTC CTCCTAGTTCCGCTCATATCTTAGGGACTGATGAATTTGGTCATGATGTTCTCTCAGTGATGATGGCATCTACGCTAACC TCTCTAATTGTAGGAATTTCAGTTGGAGCATTAATTGCAATTATTAGTACGCTAATTGGATTGTTTGGAGGCTACTACGG TGGTAAGATAAGTGGTGTAATAATTGATATATTAACTATTACCGCTTTAACTATACCAGGTGTCATCTTATTAGTAATAA TAGAAGCGTACTTTAGAGCTGCTAGTTCGACTATAAATATAACCTTGAGTTACATAATAGTTGTTATAGGACTTGCGATA ACTAGTTGGGCTTTCGGTGCCAAGCAAATAAGAGCTCAGGTCCTTTCTATATCAAAAAGGGATTATATTATAGCTTCAAG ATTAATTGGAGAGAAATCTTGGAGAATAATATTTAATCAAATATTACCATCGATACTTCCATTAACAGTTGCACAGTTTC TTTTTGGAGTACTATATGGAATCTTATCACTAATTACTGCAGAATTTTGGGGTGTATTGCCAACTAACATAAACAATTTA GGAACTATGCTATTCTTTATCTCATCCAACGGAGCTTACCTAAGTAATCAGTGGTGGTGGATATTAGGTGCGATAATACC AATTATGGTATTAGGCGCTGGTCTAGGGATATTGAATATAGGAATAGACGAGTTTATTGATCCTAGACTAAAAGAGGTTA AACCTAAGGTAATTCCGGAAAAGATTGTTATACTTGAGGAACAGGAGATAATAGAAGTACCAATGTTAGGAAATTATAAG AATAGAAAATGA
Upstream 100 bases:
>100_bases CTTCTCCAAGGGATTTTCTTATTTATCGCAATAATGTTAATACTTTCAATAGCTATAGTAGAAGCAATCTACACTATTCT AGATCCTAGAGCAAGGGTGA
Downstream 100 bases:
>100_bases TTCTAATGTATTAAGAAGATATATTCAGATTTTTACTATTTTAAAAACTTTTACTAACTTCCTATACATTAAATCAAGTT AGGGATTAGATATATTTAAT
Product: maltose ABC transporter, permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKVSKYYNRIRKALFNNKFILAGIVIILVDFAIGIVGAFWTPYPVSETFGISLPPSSAHILGTDEFGHDVLSVMMASTLT SLIVGISVGALIAIISTLIGLFGGYYGGKISGVIIDILTITALTIPGVILLVIIEAYFRAASSTINITLSYIIVVIGLAI TSWAFGAKQIRAQVLSISKRDYIIASRLIGEKSWRIIFNQILPSILPLTVAQFLFGVLYGILSLITAEFWGVLPTNINNL GTMLFFISSNGAYLSNQWWWILGAIIPIMVLGAGLGILNIGIDEFIDPRLKEVKPKVIPEKIVILEEQEIIEVPMLGNYK NRK
Sequences:
>Translated_323_residues MKVSKYYNRIRKALFNNKFILAGIVIILVDFAIGIVGAFWTPYPVSETFGISLPPSSAHILGTDEFGHDVLSVMMASTLT SLIVGISVGALIAIISTLIGLFGGYYGGKISGVIIDILTITALTIPGVILLVIIEAYFRAASSTINITLSYIIVVIGLAI TSWAFGAKQIRAQVLSISKRDYIIASRLIGEKSWRIIFNQILPSILPLTVAQFLFGVLYGILSLITAEFWGVLPTNINNL GTMLFFISSNGAYLSNQWWWILGAIIPIMVLGAGLGILNIGIDEFIDPRLKEVKPKVIPEKIVILEEQEIIEVPMLGNYK NRK >Mature_323_residues MKVSKYYNRIRKALFNNKFILAGIVIILVDFAIGIVGAFWTPYPVSETFGISLPPSSAHILGTDEFGHDVLSVMMASTLT SLIVGISVGALIAIISTLIGLFGGYYGGKISGVIIDILTITALTIPGVILLVIIEAYFRAASSTINITLSYIIVVIGLAI TSWAFGAKQIRAQVLSISKRDYIIASRLIGEKSWRIIFNQILPSILPLTVAQFLFGVLYGILSLITAEFWGVLPTNINNL GTMLFFISSNGAYLSNQWWWILGAIIPIMVLGAGLGILNIGIDEFIDPRLKEVKPKVIPEKIVILEEQEIIEVPMLGNYK NRK
Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787760, Length=238, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1789964, Length=271, Percent_Identity=29.520295202952, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789889, Length=174, Percent_Identity=28.1609195402299, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787054, Length=232, Percent_Identity=25.4310344827586, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788505, Length=192, Percent_Identity=26.0416666666667, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35333; Mature: 35333
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSKYYNRIRKALFNNKFILAGIVIILVDFAIGIVGAFWTPYPVSETFGISLPPSSAHI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE LGTDEFGHDVLSVMMASTLTSLIVGISVGALIAIISTLIGLFGGYYGGKISGVIIDILTI EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TALTIPGVILLVIIEAYFRAASSTINITLSYIIVVIGLAITSWAFGAKQIRAQVLSISKR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DYIIASRLIGEKSWRIIFNQILPSILPLTVAQFLFGVLYGILSLITAEFWGVLPTNINNL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GTMLFFISSNGAYLSNQWWWILGAIIPIMVLGAGLGILNIGIDEFIDPRLKEVKPKVIPE EEEEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCEECCHHHHCCCHHHHCCCCCCCC KIVILEEQEIIEVPMLGNYKNRK CEEEECCHHHEECCCCCCCCCCC >Mature Secondary Structure MKVSKYYNRIRKALFNNKFILAGIVIILVDFAIGIVGAFWTPYPVSETFGISLPPSSAHI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE LGTDEFGHDVLSVMMASTLTSLIVGISVGALIAIISTLIGLFGGYYGGKISGVIIDILTI EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TALTIPGVILLVIIEAYFRAASSTINITLSYIIVVIGLAITSWAFGAKQIRAQVLSISKR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DYIIASRLIGEKSWRIIFNQILPSILPLTVAQFLFGVLYGILSLITAEFWGVLPTNINNL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GTMLFFISSNGAYLSNQWWWILGAIIPIMVLGAGLGILNIGIDEFIDPRLKEVKPKVIPE EEEEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCEECCHHHHCCCHHHHCCCCCCCC KIVILEEQEIIEVPMLGNYKNRK CEEEECCHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1766370; 9384377; 3145906 [H]