Click here to switch to the map view.

The map label for this gene is 15899735

Identifier: 15899735

GI number: 15899735

Start: 2777610

End: 2778416

Strand: Direct

Name: 15899735

Synonym: SSO3029

Alternate gene names: NA

Gene position: 2777610-2778416 (Clockwise)

Preceding gene: 15899734

Following gene: 15899740

Centisome position: 92.83

GC content: 33.71

Gene sequence:

>807_bases
ATGGATTGGAAATTAGGAATTATCTCAGATGAGATCTCTCAAGATTTCGAGCATGCAGTAAAGGTAATAAAAGAGTTAGG
TGCAAGCTATGTTGAAGTAAGAAATTTATGGAATAAGAATGTAACGCAACTATTGGATTCTGAATTTTCAGAAATGAAAA
GGGTTGTTGAAAAGTATGGGCTTATCATATCCAATCTAGATTCTCCTAGCTTTAAGATATATATAGATGACGAAAAAGGT
TATAAAGAACATTTACAAATTTTAAGGAAAGTAATAGAGTTAAGTAAAAAATTGGATATAGCGTACACGAGAATATTCAC
TTTTTGGTATCAAGGAGAATTAAGATATTATATTGATAAGTTAGCTGAAAGATTCAATAGTGCTATAGATATAGCTCAAA
GTGAAGGGGTAATATTAGTCATAGAAAATGAGTACAGTTGTTTTGTAGGCACAGGGAAAGAGCTTAGAACATTCTTAGAT
AAAATAAGGACGAAATGGGTTAAGGTATTATGGGACCCTGGAAATGCCTTCTTCGCTAGGGAGACGCCGTATCCAGACGG
ATATGAATTAATAAAAGGTGACATTATGCACTTACACATTAAGGATGCAATGGTTAAAGATGGTCACTTTATTTGGATGC
CAGTAGGGAAGGGAATGATAAACTATAAGGAACAATTTAGAGCGTTAAGGGGTAGTGCTCATGTCATATCTTTAGAAACT
CACTATAGAAATAGCGCAAATGACCCAGAGGCTAGTACGAGAGAGTCCTTTAATGGTATAATTAAAATATTGAAAGAGCT
AAGTTAA

Upstream 100 bases:

>100_bases
TTAGGTTTGTAATGGCACTTAAGTCGTTGTGAAAATTCAACAAGTTCACTAAGCAAATAATTACTAAAAAAATTTAAACT
CGGAAATAGCGACATATCAT

Downstream 100 bases:

>100_bases
TTTGATTGTTTTTAAAAAAAGATTTTTATCTTAATGCTTTAGTTCATTCGTAGAATATTTTTCCATTAAATTACTACTAT
CTTCATTTCAAGTAGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; TIM Barrel Xylose Isomerase; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDWKLGIISDEISQDFEHAVKVIKELGASYVEVRNLWNKNVTQLLDSEFSEMKRVVEKYGLIISNLDSPSFKIYIDDEKG
YKEHLQILRKVIELSKKLDIAYTRIFTFWYQGELRYYIDKLAERFNSAIDIAQSEGVILVIENEYSCFVGTGKELRTFLD
KIRTKWVKVLWDPGNAFFARETPYPDGYELIKGDIMHLHIKDAMVKDGHFIWMPVGKGMINYKEQFRALRGSAHVISLET
HYRNSANDPEASTRESFNGIIKILKELS

Sequences:

>Translated_268_residues
MDWKLGIISDEISQDFEHAVKVIKELGASYVEVRNLWNKNVTQLLDSEFSEMKRVVEKYGLIISNLDSPSFKIYIDDEKG
YKEHLQILRKVIELSKKLDIAYTRIFTFWYQGELRYYIDKLAERFNSAIDIAQSEGVILVIENEYSCFVGTGKELRTFLD
KIRTKWVKVLWDPGNAFFARETPYPDGYELIKGDIMHLHIKDAMVKDGHFIWMPVGKGMINYKEQFRALRGSAHVISLET
HYRNSANDPEASTRESFNGIIKILKELS
>Mature_268_residues
MDWKLGIISDEISQDFEHAVKVIKELGASYVEVRNLWNKNVTQLLDSEFSEMKRVVEKYGLIISNLDSPSFKIYIDDEKG
YKEHLQILRKVIELSKKLDIAYTRIFTFWYQGELRYYIDKLAERFNSAIDIAQSEGVILVIENEYSCFVGTGKELRTFLD
KIRTKWVKVLWDPGNAFFARETPYPDGYELIKGDIMHLHIKDAMVKDGHFIWMPVGKGMINYKEQFRALRGSAHVISLET
HYRNSANDPEASTRESFNGIIKILKELS

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31218; Mature: 31218

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWKLGIISDEISQDFEHAVKVIKELGASYVEVRNLWNKNVTQLLDSEFSEMKRVVEKYG
CCCEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
LIISNLDSPSFKIYIDDEKGYKEHLQILRKVIELSKKLDIAYTRIFTFWYQGELRYYIDK
CEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LAERFNSAIDIAQSEGVILVIENEYSCFVGTGKELRTFLDKIRTKWVKVLWDPGNAFFAR
HHHHHHHHHHHCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHEEEEECCCCEEEEE
ETPYPDGYELIKGDIMHLHIKDAMVKDGHFIWMPVGKGMINYKEQFRALRGSAHVISLET
CCCCCCCHHHHCCCEEEEEEEHHEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEH
HYRNSANDPEASTRESFNGIIKILKELS
HCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWKLGIISDEISQDFEHAVKVIKELGASYVEVRNLWNKNVTQLLDSEFSEMKRVVEKYG
CCCEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
LIISNLDSPSFKIYIDDEKGYKEHLQILRKVIELSKKLDIAYTRIFTFWYQGELRYYIDK
CEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LAERFNSAIDIAQSEGVILVIENEYSCFVGTGKELRTFLDKIRTKWVKVLWDPGNAFFAR
HHHHHHHHHHHCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHEEEEECCCCEEEEE
ETPYPDGYELIKGDIMHLHIKDAMVKDGHFIWMPVGKGMINYKEQFRALRGSAHVISLET
CCCCCCCHHHHCCCEEEEEEEHHEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEH
HYRNSANDPEASTRESFNGIIKILKELS
HCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA